Corynebacterium faecale (DSM 45971, CCTCC AB 2013226, YIM 101506)

Name: Corynebacterium faecale (DSM 45971, CCTCC AB 2013226, YIM 101506)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132560

Type strain

Culture col. no. DSM 45971 CCTCC AB 2013226 YIM 101506 JCM 31743

NCBI tax ID(s) 1758466

Special Collections DSMZ JCM Literature strains

History <- Y. Jiang, Yunnan Univ., Yunnan Inst. Microbiol. (YIM), Kunming, China; YIM 101506 CCTCC AB 2013226 <-- Y. Jiang; Yunnan Inst. of Microbiol., Yunnan Univ., China; YIM 101505.

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Corynebacterium faecale DSM 45971 is a facultative anaerobe, mesophilic, Gram-positive prokaryote that forms circular colonies and was isolated from faeces of a primate, Assamese macaque.

Gram-positive rod-shaped colony-forming facultative anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 398839

JCM 31743,DSM 45971,CCUG 73583T

@ref 20215

Last LPSN update 2026-02-09 11:31:44

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium faecale

Full scientific name Corynebacterium faecale Chen et al. 2016

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
43945	positive	1.0-2.3 µm	1 µm	rod-shaped

Colony morphology

@ref	Colony size	Colony color	Colony shape	Medium used
43945	1-3 mm	brilliant yellow	circular	Trypticase soy agar

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
43945	Trypticase soy agar
24349	TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a) Composition: None 50.0 g/l Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
24349	positive	growth	28	mesophilic
43945	positive	optimum	28	mesophilic
43945	positive	growth	10-45
67770	positive	growth	28	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
43945	positive	optimum	7
43945	positive	optimum	6.0-10.0	alkaliphile

Physiology and metabolism

Oxygen tolerance

43945

Oxygen tolerancefacultative anaerobe

Spore formation

43945

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43945	NaCl	positive	optimum	1 %(w/v)
43945	NaCl	positive	growth	0-13 %(w/v)
43945	MgCl2x6H2O	positive	optimum	1 %(w/v)
43945	MgCl2x6H2O	positive	growth	0-9 %(w/v)

Observation

67770

Observationquinones: MK-9(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43945	17128 ChEBI	adipate	-	assimilation
43945	22599 ChEBI	arabinose	-	assimilation
43945	29016 ChEBI	arginine	+	hydrolysis
43945		casein	+	hydrolysis
43945	16947 ChEBI	citrate	+	assimilation
43945	27689 ChEBI	decanoate	-	assimilation
43945	4853 ChEBI	esculin	-	hydrolysis
43945	5291 ChEBI	gelatin	-	hydrolysis
43945	24265 ChEBI	gluconate	-	assimilation
43945	17234 ChEBI	glucose	+	assimilation
43945	17234 ChEBI	glucose	+	builds acid from
43945	25115 ChEBI	malate	+	assimilation
43945	17306 ChEBI	maltose	+	assimilation
43945	29864 ChEBI	mannitol	+	assimilation
43945	37684 ChEBI	mannose	+	assimilation
43945	506227 ChEBI	N-acetylglucosamine	-	assimilation
43945	17632 ChEBI	nitrate	+	reduction
43945	18401 ChEBI	phenylacetate	+	assimilation
43945	28017 ChEBI	starch	-	hydrolysis
43945	53424 ChEBI	tween 20	+	hydrolysis
43945	53423 ChEBI	tween 40	+	hydrolysis
43945	53425 ChEBI	tween 60	-	hydrolysis
43945	53426 ChEBI	tween 80	-	hydrolysis
43945	16199 ChEBI	urea	+	hydrolysis

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43945	16136 ChEBI	hydrogen sulfide
43945	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
43945	acid phosphatase	+	3.1.3.2
43945	alkaline phosphatase	+	3.1.3.1
43945	alpha-chymotrypsin	+	3.4.21.1
43945	alpha-glucosidase	+	3.2.1.20
43945	beta-galactosidase	+	3.2.1.23
43945	beta-glucuronidase	+	3.2.1.31
43945	catalase	+	1.11.1.6
43945	cystine arylamidase	+	3.4.11.3
43945	cytochrome oxidase	-	1.9.3.1
43945	leucine arylamidase	+	3.4.11.1
43945	trypsin	+	3.4.21.4

Fatty acid profile

Metadata FA analysis

@ref

43945

Fatty acid	Percentage
C18:1ω9c	54.2
C16:0	27.8
C17:1ω8c	12
C17:0	2.4
C16:1ω9c	1.4
C18:0	1.3
C15:0 anteiso	0.9

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Primates
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Enrichment culture	Enrichment culture composition	Host species
24349	faeces of a primate, Assamese macaque	Yunnan province, Yunnan Wild Animal Park	China	CHN	Asia			Assamese macaque
43945	dried faeces of a primate, Assamese macaque, Yunnan Wild Animal Park in Yunnan province, south-west China	Yunnan Wild Animal Park in Yunnan province	China	CHN	Asia	M6 agar	1% soluble starch, 0.03 % casein, 0.2 % KNO3, 0.2 % NaCl, 0.2 % KH2PO4, 0.002 % CaCO3, 0.005 % MgSO4.7H2O, 0.001 % FeSO4.7H2O and 1.2 % agar, pH 7.2
67770	Faeces of a primate, Assamese macaque							Assamese macaque

Taxonmaps

69479

Global distribution of 16S sequence KT216265 (>99% sequence identity) for Corynebacterium faecale subclade from Microbeatlas

Aquatic Samples	1119
Soil Samples	821
Animal Samples	3313
Plant Samples	152
Total Samples	5405

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24349	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM3040873v1 assembly for Corynebacterium faecale DSM 45971	complete	GCA_030408735	1758466.4	8046473045	1758466	94.55

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24349	Corynebacterium faecale strain YIM 101505 16S ribosomal RNA gene, partial sequence	KT216265	1515		1758466

GC content

@ref	GC-content (mol%)	Method
24349	61.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Corynebacterium faecale sp. nov., isolated from the faeces of Assamese macaque.	Chen X, Li GD, Li QY, Hu CJ, Liu CB, Jiang Y, Jiang CL, Han L, Huang XS	Int J Syst Evol Microbiol	10.1099/ijsem.0.001076	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24349	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45971
#43945	Xiu Chen, Gui-Ding Li, Qin-Yuan Li, Cai-Juan Hu, Cheng-Bin Liu, Yi Jiang, Cheng-Lin Jiang, Li Han, Xue-Shi Huang: Corynebacterium faecale sp. nov., isolated from the faeces of Assamese macaque. IJSEM 66: 2478 - 2483 2016 ( DOI 10.1099/ijsem.0.001076 , PubMed 27073837 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Corynebacterium faecale (DSM 45971, CCTCC AB 2013226, YIM 101506)

Name and taxonomic classification