Name: Corynebacterium faecale DSM 45971
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132560

Type strain:

Species: Corynebacterium faecale

Culture col. no.: DSM 45971, CCTCC AB 2013226, YIM 101506, JCM 31743

Strain history: CCTCC AB 2013226 <-- Y. Jiang; Yunnan Inst. of Microbiol., Yunnan Univ., China; YIM 101505.

NCBI tax ID(s): 1758466 (species)

SI-ID 398839

DSM 45971

Section

Corynebacterium faecale DSM 45971 is a facultative anaerobe, mesophilic, Gram-positive bacterium that forms circular colonies and was isolated from faeces of a primate, Assamese macaque.

colony-forming
Gram-positive
rod-shaped
facultative anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Corynebacteriaceae*
	Genus	*Corynebacterium*
	Species	**Corynebacterium faecale**
	Full Scientific Name (LPSN)	Corynebacterium faecale Chen et al. 2016

Information on morphological and physiological properties Morphology

[Ref.: #43945]	Gram stain	positive

[Ref.: #43945]	Cell length	1.0-2.3 µm

[Ref.: #43945]	Cell width	1 µm

[Ref.: #43945]	Cell shape	rod-shaped

[Ref.: #43945]	Motility	no

[Ref.: #43945]	Colony size	1-3 mm
[Ref.: #43945]	Colony color	brilliant yellow
[Ref.: #43945]	Colony shape	circular
[Ref.: #43945]	Cultivation medium used	Trypticase soy agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43945]

Culture medium

Trypticase soy agar

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Culture medium growth

[Ref.: #24349]

Culture medium

TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #24349]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #24349]	growth	28 °C
[Ref.: #43945]	optimum	28 °C
[Ref.: #43945]	growth	10-45 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #24349]	Temperature range	mesophilic
[Ref.: #43945]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43945]			optimum	7
[Ref.: #43945]			optimum	6.0-10.0

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

facultative anaerobe

[Ref.: #43945]

Ability of spore formation

	Salt		Salt conc.
[Ref.: #43945]	NaCl	optimum	1	%(w/v)
[Ref.: #43945]	NaCl	growth	0-13	%(w/v)
[Ref.: #43945]	MgCl2x6H2O	optimum	1	%(w/v)
[Ref.: #43945]	MgCl2x6H2O	growth	0-9	%(w/v)

[Ref.: #67770]

Observation

quinones: MK-9(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43945]	adipate ChEBI	-	assimilation
[Ref.: #43945]	arabinose ChEBI	-	assimilation
[Ref.: #43945]	arginine ChEBI	+	hydrolysis
[Ref.: #43945]	casein	+	hydrolysis
[Ref.: #43945]	citrate ChEBI	+	assimilation
[Ref.: #43945]	decanoate ChEBI	-	assimilation
[Ref.: #43945]	esculin ChEBI	-	hydrolysis
[Ref.: #43945]	gelatin ChEBI	-	hydrolysis
[Ref.: #43945]	gluconate ChEBI	-	assimilation
[Ref.: #43945]	glucose ChEBI	+	assimilation
[Ref.: #43945]	glucose ChEBI	+	builds acid from
[Ref.: #43945]	malate ChEBI	+	assimilation
[Ref.: #43945]	maltose ChEBI	+	assimilation
[Ref.: #43945]	mannitol ChEBI	+	assimilation
[Ref.: #43945]	mannose ChEBI	+	assimilation
[Ref.: #43945]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #43945]	nitrate ChEBI	+	reduction
[Ref.: #43945]	phenylacetate ChEBI	+	assimilation
[Ref.: #43945]	starch ChEBI	-	hydrolysis
[Ref.: #43945]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43945]	tween 40 ChEBI	+	hydrolysis
[Ref.: #43945]	tween 60 ChEBI	-	hydrolysis
[Ref.: #43945]	tween 80 ChEBI	-	hydrolysis
[Ref.: #43945]	urea ChEBI	+	hydrolysis
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43945]		hydrogen sulfide ChEBI	no
[Ref.: #43945]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43945]	acid phosphatase	+	3.1.3.2
[Ref.: #43945]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43945]	alpha-chymotrypsin	+	3.4.21.1
[Ref.: #43945]	alpha-glucosidase	+	3.2.1.20
[Ref.: #43945]	beta-galactosidase	+	3.2.1.23
[Ref.: #43945]	beta-glucuronidase	+	3.2.1.31
[Ref.: #43945]	catalase	+	1.11.1.6
[Ref.: #43945]	cystine arylamidase	+	3.4.11.3
[Ref.: #43945]	cytochrome oxidase	-	1.9.3.1
[Ref.: #43945]	leucine arylamidase	+	3.4.11.1
[Ref.: #43945]	trypsin	+	3.4.21.4
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43945]

Fatty acid	Percentage
C18:1ω9c	54.2
C16:0	27.8
C17:1ω8c	12
C17:0	2.4
C16:1ω9c	1.4
C18:0	1.3
C15:0 anteiso	0.9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24349]	Sample type/isolated from	faeces of a primate, Assamese macaque
[Ref.: #24349]	Host species	Assamese macaque
[Ref.: #24349]	Geographic location (country and/or sea, region)	Yunnan province, Yunnan Wild Animal Park
[Ref.: #24349]	Country	China
[Ref.: #24349]	Country ISO 3 Code	CHN
[Ref.: #24349]	Continent	Asia

[Ref.: #43945]	Sample type/isolated from	dried faeces of a primate, Assamese macaque, Yunnan Wild Animal Park in Yunnan province, south-west China
[Ref.: #43945]	Geographic location (country and/or sea, region)	Yunnan Wild Animal Park in Yunnan province
[Ref.: #43945]	Country	China
[Ref.: #43945]	Country ISO 3 Code	CHN
[Ref.: #43945]	Continent	Asia
[Ref.: #43945]	Enrichment culture	M6 agar
[Ref.: #43945]	Enrichment culture composition	1% soluble starch, 0.03 % casein, 0.2 % KNO3, 0.2 % NaCl, 0.2 % KH2PO4, 0.002 % CaCO3, 0.005 % MgSO4.7H2O, 0.001 % FeSO4.7H2O and 1.2 % agar, pH 7.2

[Ref.: #67770]	Sample type/isolated from	Faeces of a primate, Assamese macaque
[Ref.: #67770]	Host species	Assamese macaque
* marker position based on {}

Isolation sources categories

#Host	#Mammals	#Primates
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KT216265 (>99% sequence identity) for Corynebacterium faecale subclade from Microbeatlas

Aquatic Samples	1119
Soil Samples	821
Animal Samples	3313
Plant Samples	152
Total Samples	5405

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24349]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24349]	Corynebacterium faecale strain YIM 101505 16S ribosomal RNA gene, partial sequence	KT216265	1515	ENA	1758466 tax ID

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GC-content

61.5 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #24349]

Culture collection no.

DSM 45971, CCTCC AB 2013226, YIM 101506, JCM 31743

[Ref.: #90877]

SI-ID 398839

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Corynebacterium faecale sp. nov., isolated from the faeces of Assamese macaque.	Chen X, Li GD, Li QY, Hu CJ, Liu CB, Jiang Y, Jiang CL, Han L, Huang XS	Int J Syst Evol Microbiol	10.1099/ijsem.0.001076	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24349

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45971

#43945

Xiu Chen, Gui-Ding Li, Qin-Yuan Li, Cai-Juan Hu, Cheng-Bin Liu, Yi Jiang, Cheng-Lin Jiang, Li Han, Xue-Shi Huang: Corynebacterium faecale sp. nov., isolated from the faeces of Assamese macaque. IJSEM 66: 2478 - 2483 2016 ( DOI 10.1099/ijsem.0.001076 , PubMed 27073837 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90877

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398839.1 )

* These data were automatically processed and therefore are not curated

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