Name: Paenibacillus dakarensis FF9
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132497

Type strain:

Species: Paenibacillus dakarensis

Strain Designation: FF9

Culture col. no.: DSM 29777, CSUR P1429

Strain history: <- C. I. Lo, URMITE, Univ. Méditerranée, Marseille, France; FF9 <- B. Fall

NCBI tax ID(s): 1527293 (species)

SI-ID 401123

DSM 29777

Section

Paenibacillus dakarensis FF9 is a mesophilic bacterium that was isolated from human blood sample, 16-month-old child.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus dakarensis**
	Full Scientific Name (LPSN)	Paenibacillus dakarensis Lo et al. 2021

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24286]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #24286]

Culture medium growth

[Ref.: #24286]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24286]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24286]			growth	30 °C

[Ref.: #24286]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24286]	Sample type/isolated from	human blood sample, 16-month-old child
[Ref.: #24286]	Geographic location (country and/or sea, region)	Principal Hospital of Dakar
[Ref.: #24286]	Country	Senegal
[Ref.: #24286]	Country ISO 3 Code	SEN
[Ref.: #24286]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Host	#Human	#Child
#Host Body Product	#Fluids	#Blood

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LM652718 (>99% sequence identity) for Paenibacillus dakarensis from Microbeatlas

Aquatic Samples
Soil Samples	22
Animal Samples	38
Plant Samples	4
Total Samples	64

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24286]	Paenibacillus sp. FF9 partial 16S rRNA gene, isolate FF9	LM652718	1517	ENA	1527293 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Paenibacillus dakarensis FF9	GCA_001373415	contig	GenBank	1527293 tax ID	*
[Ref.: #66792]	Paenibacillus dakarensis FF9	2706794584	draft	JGI IMG/M	1527293 tax ID	*

Availability in culture collections External links

[Ref.: #24286]

Culture collection no.

DSM 29777, CSUR P1429

[Ref.: #90824]

SI-ID 401123

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24286

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29777

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90824

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401123.1 )

* These data were automatically processed and therefore are not curated

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