Name: Nocardioides antarcticus M-SA3-94
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132228

Type strain:

Species: Nocardioides antarcticus

Strain Designation: M-SA3-94

Culture col. no.: DSM 102912, CCTCC AB 2014053, LMG 28254, JCM 32437

Strain history: LMG 28254 <-- S. Deng; CCTCC, Wuhan Univ., China; M-SA3-94.

NCBI tax ID(s): 1535312 (species)

SI-ID 393877

LMG 28254

Section

Nocardioides antarcticus M-SA3-94 is a psychrophilic bacterium that was isolated from sediment, Ardley cove.

psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Propionibacteriales*
	Family	*Nocardioidaceae*
	Genus	*Nocardioides*
	Species	**Nocardioides antarcticus**
	Full Scientific Name (LPSN)	Nocardioides antarcticus Deng et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24017]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #24017]

Culture medium growth

[Ref.: #24017]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24017]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24017]			growth	20 °C
[Ref.: #67770]			growth	20 °C

[Ref.: #24017]	Temperature range	psychrophilic
[Ref.: #67770]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-8(H₄)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24017]	Sample type/isolated from	sediment, Ardley cove
[Ref.: #24017]	Geographic location (country and/or sea, region)	King George Island
[Ref.: #24017]	Country	Antarctica
[Ref.: #24017]	Country ISO 3 Code	ATA
[Ref.: #24017]	Continent	Australia and Oceania
[Ref.: #24017]	Geographic location	-62.2000°/-58.9167°

[Ref.: #67770]	Sample type/isolated from	Marine sediment of Ardley cove
[Ref.: #67770]	Geographic location (country and/or sea, region)	King George Island
[Ref.: #67770]	Country	Antarctica
[Ref.: #67770]	Country ISO 3 Code	ATA
[Ref.: #67770]	Continent	Antarctica
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KM347967 (>99% sequence identity) for Nocardioides antarcticus subclade from Microbeatlas

Aquatic Samples	401
Soil Samples	690
Animal Samples	391
Plant Samples	147
Total Samples	1629

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #24017]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24017]	Nocardioides antarcticus strain M-SA3-94 16S ribosomal RNA gene, partial sequence	KM347967	1500	ENA	1535312 tax ID

[Ref.: #67770]

GC-content

66.7 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #24017]

Culture collection no.

DSM 102912, CCTCC AB 2014053, LMG 28254, JCM 32437

[Ref.: #90578]

SI-ID 393877

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Nocardioides antarcticus sp. nov., isolated from marine sediment.	Deng S, Chang X, Zhang Y, Ren L, Jiang F, Qu Z, Peng F	Int J Syst Evol Microbiol	10.1099/ijs.0.000309	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24017

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102912

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90578

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID393877.1 )

* These data were automatically processed and therefore are not curated

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