Name: Streptosporangium oxazolinicum K07-0460
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132121

Type strain:

Species: Streptosporangium oxazolinicum

Strain Designation: K07-0460

Culture col. no.: DSM 45550, BCC 46325, JCM 17388

Strain history: A. Matsumoto K07-0460.

NCBI tax ID(s): 909287 (species)

SI-ID 400904

DSM 45550

Section

Streptosporangium oxazolinicum K07-0460 is a mesophilic bacterium that was isolated from orchid root.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Streptosporangium*
	Species	**Streptosporangium oxazolinicum**
	Full Scientific Name (LPSN)	Streptosporangium oxazolinicum Inahashi et al. 2011

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23911]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #23911]

Culture medium growth

[Ref.: #23911]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23911]

Culture medium composition

expand / minimize

[Ref.: #23911]

Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

[Ref.: #23911]

Culture medium growth

[Ref.: #23911]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #23911]			growth	28 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #23911]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23911]	Name of produced compound	spoxazomicins A, B and C, antitrypanosomal alkaloids
[Ref.: #67770]	Name of produced compound	Spoxazomicins

[Ref.: #67770]

Observation

quinones: MK-9(H₂), MK-9(H₄), MK-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23911]	Sample type/isolated from	orchid root
[Ref.: #23911]	Geographic location (country and/or sea, region)	Okinawa
[Ref.: #23911]	Country	Japan
[Ref.: #23911]	Country ISO 3 Code	JPN
[Ref.: #23911]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Root of a plant, a variety of orchid
[Ref.: #67770]	Geographic location (country and/or sea, region)	Okinawa Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB594818 (>99% sequence identity) for Streptosporangium from Microbeatlas

Aquatic Samples	6
Soil Samples	220
Animal Samples	12
Plant Samples	13
Total Samples	251

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #23911]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23911]	Streptosporangium oxazolinicum gene for 16S rRNA, partial sequence	AB594818	1432	ENA	909287 tax ID

[Ref.: #23911]

GC-content

72 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #23911]

Culture collection no.

DSM 45550, BCC 46325, JCM 17388

[Ref.: #90477]

SI-ID 400904

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptosporangium oxazolinicum sp. nov., a novel endophytic actinomycete producing new antitrypanosomal antibiotics, spoxazomicins.	Inahashi Y, Matsumoto A, Omura S, Takahashi Y	J Antibiot (Tokyo)	10.1038/ja.2011.18	2011	*
Enzymology	Spoxazomicins A-C, novel antitrypanosomal alkaloids produced by an endophytic actinomycete, Streptosporangium oxazolinicum K07-0460(T).	Inahashi Y, Iwatsuki M, Ishiyama A, Namatame M, Nishihara-Tsukashima A, Matsumoto A, Hirose T, Sunazuka T, Yamada H, Otoguro K, Takahashi Y, Omura S, Shiomi K	J Antibiot (Tokyo)	10.1038/ja.2011.16	2011	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23911

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45550

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#90477

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400904.1 )

* These data were automatically processed and therefore are not curated

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