Name: Clostridium jeddahitimonense CL-2
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 132018

Type strain:

Species: Clostridium jeddahitimonense

Strain Designation: CL-2

Culture col. no.: DSM 28716, CSUR P1230

Strain history: <- A. Papadioti, Univ. Méditerranée, Marseille, France; CL-2 <- G. Noemie {2014}

NCBI tax ID(s): 1499684 (species)

Special Collections

Section

Clostridium jeddahitimonense CL-2 is a bacterium that was isolated from human feces from an obese individual.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	"Clostridium jeddahitimonense"
	Full Scientific Name (LPSN)	Clostridium jeddahitimonense Kieu et al. 2021

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23809]

Culture medium

PY + X MEDIUM (DSMZ Medium 104b)

[Ref.: #23809]

Culture medium growth

[Ref.: #23809]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23809]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23809]			growth	37 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23809]	Sample type/isolated from	human feces from an obese individual
[Ref.: #23809]	Country	Saudi Arabia
[Ref.: #23809]	Country ISO 3 Code	SAU
[Ref.: #23809]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LK021118 (>99% sequence identity) for Clostridium from Microbeatlas

Aquatic Samples	401
Soil Samples	201
Animal Samples	13320
Plant Samples	232
Total Samples	14154

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23809]	Clostridium sp. CL-2 partial 16S rRNA gene, isolate CL-2	LK021118	1472	GenBank ENA	1499684 tax ID

Availability in culture collections External links

[Ref.: #23809]

Culture collection no.

DSM 28716, CSUR P1230

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Clostridium culturomicium sp. nov. and Clostridium jeddahitimonense sp. nov., novel members of the Clostridium genus isolated from the stool of an obese Saudi Arabian.	Kieu HT, Garrigou N, Fadlane A, Brechard L, Armstrong N, Decloquement P, Yasir M, Azhar EI, Al-Masaudi SB, Lagier JC, Tidjani Alou M, Raoult D	Curr Microbiol	10.1007/s00284-021-02616-4	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23809

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28716

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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