Name: Vogesella oryzae L3D16
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131564

Type strain:

Species: Vogesella oryzae

Strain Designation: L3D16

Culture col. no.: DSM 28781

Strain history: <- N. Ramesh Kumar, Nat. Inst. of Interdisciplinary Science and Technol., Thiruvananthapuram, Kerala, India; L3D16

NCBI tax ID(s): 1735285 (species)

Other strains from Vogesella oryzae

V. oryzae L3B39, DSM 28780, LMG 28272 (type strain)
V. oryzae L1E9, DSM 28782

Vogesella oryzae L3D16 is a bacterium that was isolated from rice rhizosphere.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Neisseriales*
	Family	*Chromobacteriaceae*
	Genus	*Vogesella*
	Species	**Vogesella oryzae**
	Full Scientific Name (LPSN)	Vogesella oryzae Rameshkumar et al. 2017

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #22791]

Intellectual property rights:

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22791]	Sample type/isolated from	rice rhizosphere
[Ref.: #22791]	Geographic location (country and/or sea, region)	Kerala
[Ref.: #22791]	Country	India
[Ref.: #22791]	Country ISO 3 Code	IND
[Ref.: #22791]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KR363130 (>99% sequence identity) for Vogesella oryzae subclade from Microbeatlas

Aquatic Samples	188
Soil Samples	50
Animal Samples	28
Plant Samples	21
Total Samples	287

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22791]	Vogesella oryzae strain L3D16 16S ribosomal RNA gene, partial sequence	KR363130	1353	ENA	1735285 tax ID

Availability in culture collections External links

[Ref.: #22791]

Culture collection no.

DSM 28781

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Vogesella oryzae sp. nov., isolated from the rhizosphere of saline tolerant pokkali rice.	Rameshkumar N, Lang E, Tanaka N	Syst Appl Microbiol	10.1016/j.syapm.2015.10.003	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22791

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28781

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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