Vogesella oryzae (DSM 28780, LMG 28272, L3B39)

Name: Vogesella oryzae (DSM 28780, LMG 28272, L3B39)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131563

Type strain

Strain Designation L3B39

Culture col. no. DSM 28780 LMG 28272 L3B39

NCBI tax ID(s) 1735285

Special Collections DSMZ

History <- N. Ramesh Kumar, Nat. Inst. of Interdisciplinary Science and Technol., Thiruvananthapuram, Kerala, India; L3B39

Links

Vogesella oryzae L3B39 is a bacterium that was isolated from rice rhizosphere.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 272669

LMG 28272

@ref 20215

Last LPSN update 2026-02-09 11:31:29

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Neisseriales

Family Chromobacteriaceae

Genus Vogesella

Species Vogesella oryzae

Full scientific name Vogesella oryzae Rameshkumar et al. 2017

BacDive ID	Other strains from **Vogesella oryzae** (2)	Type strain
131564	V. oryzae L3D16, DSM 28781
131565	V. oryzae L1E9, DSM 28782

Morphology

Multimedia

@ref:	22790
multimedia content:	DSM_28780.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_28780.jpg
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Rhizosphere

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
22790	rice rhizosphere	Kerala	India	IND	Asia

Taxonmaps

69479

Global distribution of 16S sequence KR363129 (>99% sequence identity) for Vogesella oryzae subclade from Microbeatlas

Aquatic Samples	188
Soil Samples	50
Animal Samples	28
Plant Samples	21
Total Samples	287

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22790	Vogesella oryzae strain L3B39 16S ribosomal RNA gene, partial sequence	KR363129	1484		1735285

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	List of new names and new combinations previously effectively, but not validly, published.	Oren A, Garrity GM.	Int J Syst Evol Microbiol	10.1099/ijsem.0.002278	2017
Genetics	Draft Genome Sequence of Vogesella oryzae L3B39(T), Isolated from the Rhizosphere of Saline-Tolerant Pokkali Rice.	Kangale LJ, Levasseur A, Anani H, Raoult D, Ghigo E, Fournier PE	Microbiol Resour Announc	10.1128/MRA.00515-20	2021
Phylogeny	Description of Vogesella oryzae sp. nov., isolated from the rhizosphere of saline tolerant pokkali rice.	Rameshkumar N, Lang E, Tanaka N	Syst Appl Microbiol	10.1016/j.syapm.2015.10.003	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22790	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28780
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Vogesella oryzae (DSM 28780, LMG 28272, L3B39)

Name and taxonomic classification

Morphology

Multimedia

Culture and growth conditions

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

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