Name: Actinospica durhamensis DSM 46820
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131482

Type strain:

Species: Actinospica durhamensis

Culture col. no.: DSM 46820, NCIMB 14953, CSCA 57, DSM 99970

Strain history: <- P. Golinska, Department of Microbiology, Nicolaus Copernicus University, Torun; CSCA 57

NCBI tax ID(s): 1508375 (species)

SI-ID 402311

DSM 46820

Special Collections

DSMZ

Section

Actinospica durhamensis DSM 46820 is a bacterium that was isolated from mineral layer of a spruce forest soil.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Catenulisporales*
	Family	*Actinospicaceae*
	Genus	*Actinospica*
	Species	**Actinospica durhamensis**
	Full Scientific Name (LPSN)	Actinospica durhamensis Golinska et al. 2015

Information on morphological and physiological properties Morphology

Multimedia content

[Ref.: #22709]

Caption:

Medium 987 pH5 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22709]

Culture medium

ISP2 MEDIUM (DSMZ Medium 987)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #22709]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22709]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22709]	Sample type/isolated from	mineral layer of a spruce forest soil
[Ref.: #22709]	Geographic location (country and/or sea, region)	County Durham, Hamsterlay Forest
[Ref.: #22709]	Country	United Kingdom
[Ref.: #22709]	Country ISO 3 Code	GBR
[Ref.: #22709]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

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Global distribution of 16S sequence KJ445732 (>99% sequence identity) for Actinospica durhamensis from Microbeatlas

Aquatic Samples	15
Soil Samples	712
Animal Samples	67
Plant Samples	53
Total Samples	847

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22709]	Actinospica durhamensis strain CSCA57 16S ribosomal RNA gene, partial sequence	KJ445732	1426	GenBank ENA	1508375 tax ID

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GC-content

68.0 mol%

fluorimetric

Availability in culture collections External links

[Ref.: #22709]

Culture collection no.

DSM 46820, NCIMB 14953, CSCA 57, DSM 99970

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SI-ID 402311

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinospica durhamensis sp. nov., isolated from a spruce forest soil.	Golinska P, Zucchi TD, Silva L, Dahm H, Goodfellow M	Antonie Van Leeuwenhoek	10.1007/s10482-015-0496-1	2015	*
Phylogeny	Actinospica acidithermotolerans sp. nov., a novel actinomycete isolated from sediment from an Indonesian hot spring.	Kusuma AB, Putra KE, Vanggy LR, Loh J, Nouioui I, Goodfellow M	Arch Microbiol	10.1007/s00203-022-03058-7	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22709

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46820

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89899

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID402311.1 )

* These data were automatically processed and therefore are not curated

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