Name: Streptomyces gilvifuscus T113
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131468

Type strain:

Species: Streptomyces gilvifuscus

Strain Designation: T113

Culture col. no.: DSM 102000, KACC 18248, KEMB 9005-213, NBRC 110904

Strain history: <- KACC; KACC 18248 <- J.S. Kim (Kyonggi Univ.); T113

NCBI tax ID(s): 1550617 (species)

SI-ID 396600

DSM 102000

Section

Streptomyces gilvifuscus T113 is a mesophilic bacterium that was isolated from forest soil.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces gilvifuscus**
	Full Scientific Name (LPSN)	Streptomyces gilvifuscus Nguyen and Kim 2015

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22695]			growth	28 °C

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Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22695]	Sample type/isolated from	forest soil
[Ref.: #22695]	Geographic location (country and/or sea, region)	Pyeongchang-gun
[Ref.: #22695]	Country	Republic of Korea
[Ref.: #22695]	Country ISO 3 Code	KOR
[Ref.: #22695]	Continent	Asia
[Ref.: #22695]	Geographic location	37.6000°/128.6670°
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22695]	Streptomyces gilvifuscus strain T113 16S ribosomal RNA gene, partial sequence	KM229362	1441	ENA	1550617 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces gilvifuscus T113	GCA_028401765	contig	GenBank	1550617 tax ID	*

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GC-content

70.53 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces gilvifuscus T113 NCBI: GCA_028401765.1
[Ref.: #69480]	flagellated	no	98.091	no
[Ref.: #69480]	gram-positive	yes	89.817	no
[Ref.: #69480]	anaerobic	no	99.069	no
[Ref.: #69480]	aerobic	yes	91.618	no
[Ref.: #69480]	halophile	no	94.789	no
[Ref.: #69480]	spore-forming	yes	94.355	no
[Ref.: #69480]	glucose-ferment	no	88.297	no
[Ref.: #69480]	thermophile	no	98.819	no
[Ref.: #69480]	glucose-util	yes	88.063	no
[Ref.: #69480]	motile	no	93.987	no

Availability in culture collections External links

[Ref.: #22695]

Culture collection no.

DSM 102000, KACC 18248, KEMB 9005-213, NBRC 110904

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SI-ID 396600

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces gilvifuscus sp. nov., an actinomycete that produces antibacterial compounds isolated from soil.	Nguyen TM, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.000447	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22695

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102000

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#89887

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396600.1 )

* These data were automatically processed and therefore are not curated

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