Pseudomonas fulva DSM 17717 is an aerobe, mesophilic, Gram-negative prokaryote that has multiple antibiotic resistances and was isolated from rice paddy.
antibiotic resistance Gram-negative motile rod-shaped aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pseudomonadales |
| Family Pseudomonadaceae |
| Genus Pseudomonas |
| Species Pseudomonas fulva |
| Full scientific name Pseudomonas fulva Iizuka and Komagata 1963 (Approved Lists 1980) |
| BacDive ID | Other strains from Pseudomonas fulva (5) | Type strain |
|---|---|---|
| 13127 | P. fulva DSM 26075 | |
| 136549 | P. fulva CB 10, KS 0029, CIP 106694, CCUG 12537, IAM ... | |
| 161141 | P. fulva JCM 11241, IFO 16639, NBRC 16639 | |
| 161142 | P. fulva JCM 11243, IFO 16638, NBRC 16638 | |
| 175156 | P. fulva 116276, DSM 116276 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7159 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | Medium recipe at MediaDive | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water | ||
| 39573 | MEDIUM 72- for trypto casein soja agar | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |||
| 119484 | CIP Medium 72 | Medium recipe at CIP |
| Test 1 | |
|---|---|
| @ref | 7159 |
| Medium | Mueller-Hinton Agar |
| Manual annotation | 1 |
| Inhibition zone diameter in mm | |
| Amikacin 30µg (disc) | 24-26 |
| Ampicillin 10µg (disc) | 0 |
| Aztreonam 30µg (disc) | 20 |
| Bacitracin 10Unit | 0 |
| Cefalotin 30µg (disc) | 0 |
| Cefazolin 30µg (disc) | 0 |
| Cefotaxime 30µg (disc) | 20 |
| Ceftriaxone 30µg (disc) | 20-22 |
| Chloramphenicol 30µg (disc) | 16-18 |
| Clindamycin 10µg (disc) | 0 |
| Colistin 10µg (disc) | 16 |
| Doxycycline 30µg (disc) | 22 |
| Erythromycin 15µg (disc) | 0 |
| Fosfomycin 50µg (disc) | 0 |
| Gentamycin 10µg (disc) | |
| Imipenem 10µg (disc) | 38-40 |
| Kanamycin 30µg (disc) | 26-28 |
| Lincomycin 15µg (disc) | 0 |
| Linezolid 10µg (disc) | 0 |
| Mezlocillin 30µg (disc) | 16 |
| Moxifloxacin 5µg (disc) | 20 |
| Neomycin 30µg (disc) | 20 |
| Nitrofurantoin 100µg (disc) | 0 |
| Norfloxacin 10µg (disc) | 30 |
| Nystatin 100Unit | 0 |
| Ofloxacin 5µg (disc) | 22-24 |
| Oxacillin 5µg (disc) | 0 |
| Penicillin G 6µg (disc) | 0 |
| Pipemidic acid 20µg (disc) | 20-22 |
| Piperacillin/Tazobactam 40µg (disc) | 22 |
| Polymyxin B 300Unit | 18 |
| Quinupristin/Dalfopristin 15µg (disc) | 0 |
| Teicoplanin 30µg (disc) | 0 |
| Tetracycline 30µg (disc) | 24 |
| Ticarcillin 75µg (disc) | 16-18 |
| Vancomycin 30µg (disc) | 0 |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 98.8 |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 119484 | NaCl | positive | growth | 0-10 % |
| 67770 | Observationquinones: Q-9 |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 68369 | 29016 ChEBI | arginine | + | hydrolysis | from API 20NE |
| 119484 | 16947 ChEBI | citrate | + | carbon source | |
| 68369 | 17634 ChEBI | D-glucose | + | assimilation | from API 20NE |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 68369 | 27689 ChEBI | decanoate | + | assimilation | from API 20NE |
| 119484 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 68369 | 24265 ChEBI | gluconate | + | assimilation | from API 20NE |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 119484 | 17632 ChEBI | nitrate | - | reduction | |
| 119484 | 17632 ChEBI | nitrate | - | respiration | |
| 68369 | 17632 ChEBI | nitrate | - | reduction | from API 20NE |
| 119484 | 16301 ChEBI | nitrite | - | reduction | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 68369 | 16199 ChEBI | urea | - | hydrolysis | from API 20NE |
| @ref | ChEBI | Metabolite | Is resistant | Resistance conc. | Is sensitive | |
|---|---|---|---|---|---|---|
| 119484 | 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate) | |||||
| 7159 | 28971 | Ampicillin | 10 µg (disc) | from Antibiotic test | ||
| 7159 | 28669 | Bacitracin | 10 Unit | from Antibiotic test | ||
| 7159 | 124991 | Cefalotin | 30 µg (disc) | from Antibiotic test | ||
| 7159 | 474053 | Cefazolin | 30 µg (disc) | from Antibiotic test | ||
| 7159 | 3745 | Clindamycin | 10 µg (disc) | from Antibiotic test | ||
| 7159 | 48923 | Erythromycin | 15 µg (disc) | from Antibiotic test | ||
| 7159 | 28915 | Fosfomycin | 50 µg (disc) | from Antibiotic test | ||
| 7159 | 6472 | Lincomycin | 15 µg (disc) | from Antibiotic test | ||
| 7159 | 63607 | Linezolid | 10 µg (disc) | from Antibiotic test | ||
| 7159 | 71415 | Nitrofurantoin | 100 µg (disc) | from Antibiotic test | ||
| 7159 | 7660 | Nystatin | 100 Unit | from Antibiotic test | ||
| 7159 | 7809 | Oxacillin | 5 µg (disc) | from Antibiotic test | ||
| 7159 | 18208 | Penicillin G | 6 µg (disc) | from Antibiotic test | ||
| 7159 | Quinupristin/Dalfopristin | 15 µg (disc) | from Antibiotic test | |||
| 7159 | 29687 | Teicoplanin | 30 µg (disc) | from Antibiotic test | ||
| 7159 | 28001 | Vancomycin | 30 µg (disc) | from Antibiotic test |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 119484 | alcohol dehydrogenase | + | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 119484 | amylase | - | ||
| 68369 | arginine dihydrolase | + | 3.5.3.6 | from API 20NE |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 119484 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 119484 | caseinase | - | 3.4.21.50 | |
| 119484 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 119484 | DNase | - | ||
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 119484 | gelatinase | - | ||
| 68369 | gelatinase | - | from API 20NE | |
| 119484 | lecithinase | - | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 119484 | lipase | - | ||
| 68382 | lipase (C 14) | + | from API zym | |
| 119484 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 119484 | ornithine decarboxylase | - | 4.1.1.17 | |
| 119484 | oxidase | + | ||
| 119484 | protease | - | ||
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 119484 | tryptophan deaminase | - | ||
| 119484 | tween esterase | + | ||
| 119484 | urease | - | 3.5.1.5 | |
| 68369 | urease | - | 3.5.1.5 | from API 20NE |
| 68382 | valine arylamidase | + | from API zym |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Engineered | #Agriculture | #Field | |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
Global distribution of 16S sequence AB060136 (>99% sequence identity) for Pseudomonas from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM73056v1 assembly for Pseudomonas fulva NBRC 16637 = DSM 17717 | contig | 1215102 | 70.07 | ||||
| 67770 | ASM62126v1 assembly for Pseudomonas fulva NBRC 16637 = DSM 17717 | scaffold | 1215102 | 68.04 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Pseudomonas fulva 16S rRNA gene, complete sequence | D84015 | 1526 | 47880 | ||
| 7159 | Pseudomonas fulva gene for 16S rRNA, partial sequence, strain: NRIC 0180 | AB060136 | 1484 | 47880 | ||
| 124043 | Pseudomonas fulva gene for 16S rRNA, partial sequence, strain: NBRC 16637. | AB681093 | 1462 | 47880 | ||
| 124043 | Pseudomonas fulva strain NBRC 16637 16S ribosomal RNA gene, partial sequence. | MT781362 | 1367 | 47880 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 60 | high performance liquid chromatography (HPLC) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 94.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.10 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 83.50 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 99.21 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 82.66 | no |
| 125438 | aerobic | aerobicⓘ | yes | 89.69 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 97.49 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 86.60 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Molecular Structure and Biosynthesis of Pyoverdines Produced by Pseudomonas fulva. | Ochiai E, Kawabe T, Shionyu M, Hasegawa M. | Microorganisms | 10.3390/microorganisms13061409 | 2025 | ||
| The Indiscriminate Chemical Makeup of Secondary Metabolites Derived from Endophytes Harvested from Aloe barbadensis Miller in South Africa's Limpopo Region. | Nchabeleng MM, Fonkui TY, Ezekiel G. | Molecules | 10.3390/molecules29061297 | 2024 | ||
| Complete Genome Sequence of Pseudomonas sp. Strain SGAir0191, Isolated from Tropical Air Collected in Singapore. | Wong A, Junqueira ACM, Chaturvedi A, Uchida A, Purbojati RW, Houghton JNI, Chenard C, Clare ME, Kushwaha KK, Putra A, Gaultier NE, Premkrishnan BNV, Vettath VK, Heinle CE, Drautz-Moses DI, Schuster SC. | Microbiol Resour Announc | 10.1128/mra.00617-19 | 2019 | ||
| Enzymology | First report of bloodstream infection caused by Pseudomonas fulva. | Seok Y, Shin H, Lee Y, Cho I, Na S, Yong D, Jeong SH, Lee K. | J Clin Microbiol | 10.1128/jcm.01609-09 | 2010 | |
| Vanadium Stress-Driven Microbial Acclimation Enhances Biological Denitrification in Recycling of Vanadium-Containing Industrial Wastewater. | She Y, Zhang Y, Zheng Q, Cai Z, Wang Y, Xue N. | Microorganisms | 10.3390/microorganisms13051003 | 2025 | ||
| Enzymology | Polymicrobial ventriculitis involving Pseudomonas fulva. | Rebolledo PA, Vu CC, Carlson RD, Kraft CS, Anderson EJ, Burd EM. | J Clin Microbiol | 10.1128/jcm.03545-13 | 2014 | |
| New Pyridinium Compound from Marine Sediment-Derived Bacterium Bacillus licheniformis S-1. | Wang H, Wang Y, Li Y, Wang G, Shi T, Wang B. | Molecules | 10.3390/molecules30010007 | 2024 | ||
| Genetics | Complete genome sequence of Pseudomonas fulva strain MTT5 isolated from the maize (Zea mays) phyllosphere. | Akhoon BA, Christensen K, Lefevers H, Corbin KR. | Microbiol Resour Announc | 10.1128/mra.00543-25 | 2025 | |
| Genetics | Draft genome sequence data of a 4-nitrophenol- degrading bacterium, Pseudomonas alloputida strain PNP. | Arora PK, Saroj RS, Mishra R, Omar RA, Kumari P, Srivastava A, Garg SK, Singh VP. | Data Brief | 10.1016/j.dib.2021.107390 | 2021 | |
| Pathogenicity | Antibacterial Activities of Bacteria Isolated from the Marine Sponges Isodictya compressa and Higginsia bidentifera Collected from Algoa Bay, South Africa. | Matobole RM, van Zyl LJ, Parker-Nance S, Davies-Coleman MT, Trindade M. | Mar Drugs | 10.3390/md15020047 | 2017 | |
| Genetics | High quality draft genome sequences of Pseudomonas fulva DSM 17717(T), Pseudomonas parafulva DSM 17004(T) and Pseudomonas cremoricolorata DSM 17059(T) type strains. | Pena A, Busquets A, Gomila M, Mulet M, Gomila RM, Reddy TB, Huntemann M, Pati A, Ivanova N, Markowitz V, Garcia-Valdes E, Goker M, Woyke T, Klenk HP, Kyrpides N, Lalucat J | Stand Genomic Sci | 10.1186/s40793-016-0178-2 | 2016 | |
| Metabolism | Control of pyrimidine nucleotide formation in Pseudomonas fulva. | West TP | Antonie Van Leeuwenhoek | 10.1007/s10482-009-9410-z | 2010 | |
| Phylogeny | Pseudomonas pachastrellae sp. nov., isolated from a marine sponge. | Romanenko LA, Uchino M, Falsen E, Frolova GM, Zhukova NV, Mikhailov VV | Int J Syst Evol Microbiol | 10.1099/ijs.0.63176-0 | 2005 | |
| Phylogeny | Recharacterization of Pseudomonas fulva Iizuka and Komagata 1963, and proposals of Pseudomonas parafulva sp. nov. and Pseudomonas cremoricolorata sp. nov. | Uchino M, Shida O, Uchimura T, Komagata K | J Gen Appl Microbiol | 10.2323/jgam.47.247 | 2001 |
| #7159 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17717 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #39573 | ; Curators of the CIP; |
| #58993 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 50780 |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68369 | Automatically annotated from API 20NE . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #119484 | Collection of Institut Pasteur ; Curators of the CIP; CIP 106765 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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