Pseudomonas fulva (CIP 106694, CCUG 12537, IAM 1587)

Name: Pseudomonas fulva (CIP 106694, CCUG 12537, IAM 1587)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 136549

Type strain

Strain Designation CB 10, KS 0029

Culture col. no. CIP 106694 CCUG 12537 IAM 1587 JCM 2780 LMG 11723 7 more

NCBI tax ID(s) 47880

Special Collections CCUG JCM CIP

Links

Pseudomonas fulva CB 10 is an aerobe, mesophilic, Gram-negative prokaryote of the family Pseudomonadaceae.

Gram-negative motile rod-shaped aerobe mesophilic 16S sequence

Name and taxonomic classification

SI-ID 8244

LMG 11723,IAM 1587,JCM 2780,CCUG 12537,CIP 106694,AS 1.1794,IFO 16640,NBRC 16640,CGMCC 1.1794

@ref 20215

Last LPSN update 2025-12-16 10:02:36

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas fulva

Full scientific name Pseudomonas fulva Iizuka and Komagata 1963 (Approved Lists 1980)

BacDive ID	Other strains from **Pseudomonas fulva** (5)	Type strain
13126	P. fulva DSM 17717, IAM 1529, IFO 16637, JCM 11242, ... (type strain)
13127	P. fulva DSM 26075
161141	P. fulva JCM 11241, IFO 16639, NBRC 16639
161142	P. fulva JCM 11243, IFO 16638, NBRC 16638
175156	P. fulva 116276, DSM 116276

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
35979	negative	rod-shaped

Pigmentation

@ref	Production	Name
35979		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
35979	MEDIUM 309 - for Flexibacter japonensis		Distilled water make up to (1000.000 ml);Sodium chloride (5.000 g);Agar(15.000 g);Peptone (5.000 g);Beef extract (3.000 g)
35979	CIP Medium 35			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
35979	positive	growth	30	mesophilic
35979	positive	growth	5-41
45736	positive	growth	30	mesophilic
67770	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
45736	aerobe
35979	obligate aerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
35979	NaCl	positive	growth	0-6 %
35979	NaCl		growth	8 %
35979	NaCl		growth	10 %

Observation

67770

Observationquinones: Q-9

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
35979	16947 ChEBI	citrate	+	carbon source
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
35979	4853 ChEBI	esculin	-	hydrolysis
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
35979	17632 ChEBI	nitrate	-	reduction
35979	17632 ChEBI	nitrate	-	respiration
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
35979	16301 ChEBI	nitrite	-	reduction
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE
35979	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
35979	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
35979	amylase	+
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
35979	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
35979	caseinase	-	3.4.21.50
35979	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
35979	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
35979	gelatinase	-
68369	gelatinase	-		from API 20NE
35979	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
35979	lipase	-
68382	lipase (C 14)	-		from API zym
35979	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
35979	ornithine decarboxylase	-	4.1.1.17
35979	oxidase	-
35979	protease	-
68382	trypsin	+	3.4.21.4	from API zym
35979	tryptophan deaminase	-
35979	tween esterase	-
35979	urease	-	3.5.1.5
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

45736

Fatty acid	Percentage	ECL
C18:1 ω7c /12t/9t	35.1	17.824
C16:1 ω7c	23.9	15.819
C16:0	16.6	16
C12:0	10.1	12
C10:0 3OH	4.1	11.423
C12:0 3OH	3.1	13.455
C15:0	1.6	15
C17:1 ω8c	1	16.792
C14:0	0.8	14
C17:0	0.6	17
C16:0 iso	0.5	15.626
C15:1 ω6c	0.4	14.856
C11:0 3OH	0.3	12.441
C18:0	0.3	18
C17:1 ω6c	0.3	16.862
C18:2 ω6,9c/C18:0 ANTE	0.2	17.724
Unidentified	0.2
C10:0	0.2	10
C13:0	0.2	13
C11:0	0.2	11
unknown 11.798	0.2	11.798
C17:0 iso	0.1	16.629
C13:0 ISO 2OH	0.1	13.814

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
45736	-	+	+	+	-	+	-	-	+	-	+	+	-	-	-	-	-	-	-	-
35979	-	+	+	+	-	+	-	-	+	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
45736	-	-	-	-	-	-	-	-	+	+	+	+	-	-	+	+	-	+	+	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
35979	not determinedn.d.	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	+	+	-	-	-	+	+	+	+	-	+	+	+	-	-	-	-	+	-	+	+	+	-	-	+	-	-	+	+	+	+	-	+	+	+	-	+	+	+	+	-	+	-	-	+	+	+	+	+	+	+	+	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Field
#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
35979		Japan	JPN	Asia
45736	Japanese paddy	Japan	JPN	Asia
35979	Japanese paddy	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AB060135 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	752
Soil Samples	552
Animal Samples	734
Plant Samples	748
Total Samples	2786

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
35979	1	Risk group (French classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Pseudomonas straminea gene for 16S rRNA, partial sequence, strain: IAM 1587	AB060135	1483		47882

GC content

@ref	GC-content (mol%)	Method
67770	62.1	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	A persistent and diverse airway microbiota present during chronic obstructive pulmonary disease exacerbations.	Huang YJ, Kim E, Cox MJ, Brodie EL, Brown R, Wiener-Kronish JP, Lynch SV.	OMICS	10.1089/omi.2009.0100	2010
Phylogeny	Recharacterization of Pseudomonas fulva Iizuka and Komagata 1963, and proposals of Pseudomonas parafulva sp. nov. and Pseudomonas cremoricolorata sp. nov.	Uchino M, Shida O, Uchimura T, Komagata K	J Gen Appl Microbiol	10.2323/jgam.47.247	2001

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#35979	Collection of Institut Pasteur ; Curators of the CIP; CIP 106694
#45736	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 12537
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudomonas fulva (CIP 106694, CCUG 12537, IAM 1587)

Name and taxonomic classification