Name: Sulfurovum aggregans Monchim33
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130821

Type strain:

Species: Sulfurovum aggregans

Strain Designation: Monchim33

Culture col. no.: DSM 27205, JCM 19824

Strain history: S. Mino; Hokkaido Univ., Japan; Monchim33.

NCBI tax ID(s): 1431962 (species)

SI-ID 406275

DSM 27205

Section

Sulfurovum aggregans Monchim33 is a microaerophile, mesophilic bacterium that was isolated from deep-sea hydrothermal vent chimney, depth of 2422 m.

mesophilic
microaerophile
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Epsilonproteobacteria*
	Order	*Campylobacterales*
	Family	*Helicobacteraceae*
	Genus	*Sulfurovum*
	Species	**Sulfurovum aggregans**
	Full Scientific Name (LPSN)	Sulfurovum aggregans Mino et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #21994]

Incubation period

2-3 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21994]

Culture medium

DESULFOTHERMUS MJ MEDIUM (H2/CO2) (DSMZ Medium 1011c)

[Ref.: #21994]

Culture medium growth

[Ref.: #21994]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21994]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21994]			growth	32 °C
[Ref.: #67770]			growth	33 °C

[Ref.: #21994]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #21994]

Oxygen tolerance

microaerophile

[Ref.: #67770]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21994]	Sample type/isolated from	deep-sea hydrothermal vent chimney, depth of 2422 m
[Ref.: #21994]	Geographic location (country and/or sea, region)	Indian Ocean, Kairei field in the Central Indian Ridge
[Ref.: #21994]	Country	International waters
[Ref.: #21994]	Geographic location	-25.3203°/70.0404°

[Ref.: #67770]	Sample type/isolated from	Deep-sea hydrothermal vent chimney in the Central Indian Ridge
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Hydrothermal vent
#Environmental	#Aquatic	#Marine
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB889689 (>99% sequence identity) for Sulfurovum aggregans subclade from Microbeatlas

Aquatic Samples	16
Soil Samples
Animal Samples
Plant Samples
Total Samples	16

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21994]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21994]	Sulfurovum aggregans gene for 16S ribosomal RNA, partial sequence	AB889689	1384	ENA	1431962 tax ID

[Ref.: #21994]

GC-content

42.6 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #21994]

Culture collection no.

DSM 27205, JCM 19824

[Ref.: #89308]

SI-ID 406275

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sulfurovum aggregans sp. nov., a hydrogen-oxidizing, thiosulfate-reducing chemolithoautotroph within the Epsilonproteobacteria isolated from a deep-sea hydrothermal vent chimney, and an emended description of the genus Sulfurovum.	Mino S, Kudo H, Arai T, Sawabe T, Takai K, Nakagawa S	Int J Syst Evol Microbiol	10.1099/ijs.0.065094-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21994

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27205

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89308

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406275.1 )

* These data were automatically processed and therefore are not curated

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