Streptococcus loxodontisalivarius (DSM 27382, JCM 19287, CCUG 70865)

Name: Streptococcus loxodontisalivarius (DSM 27382, JCM 19287, CCUG 70865)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130708

Type strain

Culture col. no. DSM 27382 JCM 19287 CCUG 70865 NUM 6304

NCBI tax ID(s) 1349415

Special Collections DSMZ CCUG JCM

Links

Streptococcus loxodontisalivarius DSM 27382 is a microaerophile, mesophilic prokaryote that was isolated from elephant oral cavity.

microaerophile mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 403635

JCM 19287,DSM 27382,CCUG 70865T

@ref 20215

Last LPSN update 2025-12-16 10:01:03

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Streptococcaceae

Genus Streptococcus

Species Streptococcus loxodontisalivarius

Full scientific name Streptococcus loxodontisalivarius Saito et al. 2014

Morphology

Cell morphology

@ref	Motility	Confidence
125438		91

Colony morphology

@ref	Type of hemolysis	Hemolysis ability	Incubation period
21941	alpha	1	1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21941	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
21941	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
21941	positive	growth	37	mesophilic
63757	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
21941	microaerophile
63757	microaerophile
125439	obligate aerobe

Spore formation

@ref	Spore formation	Confidence
125439		99.9

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68381	606565 ChEBI	hippurate	+	hydrolysis	from API rID32STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68381	17306 ChEBI	maltose	+	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	+	builds acid from	from API rID32STR
68381	27941 ChEBI	pullulan	+	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	+	from API rID32STR

Enzymes

@ref	Value	Activity
68381	Alanyl-Phenylalanyl-Proline arylamidase	+	from API rID32STR
68381	alkaline phosphatase	-	from API rID32STR
68381	alpha-galactosidase	-	from API rID32STR
68381	arginine dihydrolase	-	from API rID32STR
68381	beta-galactosidase	-	from API rID32STR
68381	beta-glucosidase	+	from API rID32STR
68381	beta-glucuronidase	-	from API rID32STR
68381	beta-mannosidase	-	from API rID32STR
21941	catalase	-
21941	cytochrome-c oxidase	-
68381	glycyl tryptophan arylamidase	-	from API rID32STR
68381	N-acetyl-beta-glucosaminidase	-	from API rID32STR
68381	pyrrolidonyl arylamidase	-	from API rID32STR
68381	urease	-	from API rID32STR

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
21941	-	+	-	-	-	-	-	-	-	-	+	-	+	-	-	-	+	+	-	-	-	-	+	-	+	+	-	-	+	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Mammals
#Host Body-Site	#Oral cavity and airways

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
21941	elephant oral cavity	Ichihara Elephant Kingdom, Chiba	Japan	JPN	Asia
63757	Saliva,African elephant
67770	Elephant oral cavities

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21941	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1690864v1 assembly for Streptococcus loxodontisalivarius DSM 27382	contig	GCA_016908645	1349415.3	2901175613	1349415	60.79
124043	ASM4266266v1 assembly for Streptococcus loxodontisalivarius CCUG 70865	scaffold	GCA_042662665			1349415	59.14

Genome browser: GCA_016908645

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21941	Streptococcus loxodontisalivarius gene for 16S ribosomal RNA, partial sequence	AB828326	1506		1349415
67770	Streptococcus loxodontisalivarius JCM 19287 gene for 16S rRNA, partial sequence	LC589217	1485		1349415

GC content

@ref	GC-content (mol%)	Method
21941	38.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Streptococcus loxodontisalivarius DSM 27382
NCBI: GCA_016908645

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.90	no
125439	motility	BacteriaNetⓘ	no	69.80	no
125439	gram_stain	BacteriaNetⓘ	positive	82.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	93.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptococcus loxodontisalivarius strain DSM 27382
PATRIC: 1349415.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	86.93	no
125438	anaerobic	anaerobicⓘ	no	88.50	no
125438	spore-forming	spore-formingⓘ	no	87.47	no
125438	aerobic	aerobicⓘ	no	96.00	yes
125438	thermophilic	thermophileⓘ	no	95.18	yes
125438	flagellated	motile2+ⓘ	no	91.00	no

Literature

Title	Authors	Journal	DOI	Year
Molecular characterization of multi-drug-resistant Staphylococcus aureus in mastitis bovine milk from a dairy farm in Anhui, China.	Liu J, Wang X, Bi C, Mehmood K, Ali F, Qin J, Han Z.	Front Vet Sci	10.3389/fvets.2022.966533	2022
Streptococcus loxodontisalivarius sp. nov. and Streptococcus saliviloxodontae sp. nov., isolated from oral cavities of elephants.	Saito M, Shinozaki-Kuwahara N, Hirasawa M, Takada K	Int J Syst Evol Microbiol	10.1099/ijs.0.063263-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21941	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27382
#63757	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 70865
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68381	Automatically annotated from API rID32STR .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptococcus loxodontisalivarius (DSM 27382, JCM 19287, CCUG 70865)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API rID32STR

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_016908645

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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