Prauserella coralliicola (DSM 45821, NBRC 109418, SCSIO 11529)

Name: Prauserella coralliicola (DSM 45821, NBRC 109418, SCSIO 11529)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130588

Type strain

Culture col. no. DSM 45821 NBRC 109418 SCSIO 11529

NCBI tax ID(s) 1401264

Special Collections DSMZ

History <- J. Li, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China; SCSIO 11529

Links

Prauserella coralliicola DSM 45821 is a mesophilic prokaryote that was isolated from stony coral Galaxea fascicularis.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 403679

TBRC 13933,NBRC 109418,DSM 45821

@ref 20215

Last LPSN update 2026-02-09 11:31:15

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Pseudonocardiales

Family Pseudonocardiaceae

Genus Prauserella

Species Prauserella coralliicola

Full scientific name Prauserella coralliicola Wu et al. 2014

Synonyms (1)

Prauserella endophytica

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	98

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21731	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
21731	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	91.342
125439	obligate aerobe	98.6

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Invertebrates (Other)	#Cnidaria (Corals)

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
21731	stony coral Galaxea fascicularis	Galaxea fascicularis	Hainan province, Sanya, Luhuitou fringing reef (18° 13' N 109° 28' E) at a depth of 5 m	China	CHN	Asia	18.2167	109.467 18.2167/109.467

Taxonmaps

69479

Global distribution of 16S sequence KF670858 (>99% sequence identity) for Prauserella from Microbeatlas

Aquatic Samples	10
Soil Samples	205
Animal Samples	91
Plant Samples	20
Total Samples	326

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21731	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM320227v1 assembly for Prauserella coralliicola DSM 45821	scaffold	GCA_003202275	1401264.3	2834462815	1401264	48.17

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21731	Prauserella coralliicola strain SCSIO 11529 16S ribosomal RNA gene, partial sequence	KF670858	1495		1401264

GC content

@ref	GC-content (mol%)	Method
21731	70.2	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Prauserella coralliicola DSM 45821
NCBI: GCA_003202275

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	52.50	no
125439	motility	BacteriaNetⓘ	no	75.30	no
125439	gram_stain	BacteriaNetⓘ	positive	98.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Prauserella coralliicola strain DSM 45821
PATRIC: 1401264.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.88	no
125438	anaerobic	anaerobicⓘ	no	96.65	no
125438	spore-forming	spore-formingⓘ	yes	79.05	no
125438	aerobic	aerobicⓘ	yes	91.34	no
125438	thermophilic	thermophileⓘ	no	96.34	yes
125438	flagellated	motile2+ⓘ	no	89.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Taxonomic note on the family Pseudonocardiaceae based on phylogenomic analysis and descriptions of Allosaccharopolyspora gen. nov. and Halosaccharopolyspora gen. nov.	Teo WFA, Tan GYA, Li WJ.	Int J Syst Evol Microbiol	10.1099/ijsem.0.005075	2021
	Taxogenomic and Comparative Genomic Analysis of the Genus Saccharomonospora Focused on the Identification of Biosynthetic Clusters PKS and NRPS.	Ramirez-Duran N, de la Haba RR, Vera-Gargallo B, Sanchez-Porro C, Alonso-Carmona S, Sandoval-Trujillo H, Ventosa A.	Front Microbiol	10.3389/fmicb.2021.603791	2021
Phylogeny	Prauserella cavernicola sp. nov., isolated from cave rock.	Suriyachadkun C, Ngaemthao W, Pujchakarn T, Mhuantong W, Chunhametha S	Int J Syst Evol Microbiol	10.1099/ijsem.0.005107	2021
Phylogeny	Prauserella flavalba sp. nov., a novel species of the genus Prauserella, isolated from alkaline soil.	Li Q, Ruckert C, Li G, Huang P, Schneider O, Kalinowski J, Jiang Y, Zotchev SB, Jiang C	Int J Syst Evol Microbiol	10.1099/ijsem.0.003768	2020
Phylogeny	Prauserella oleivorans sp. nov., a halophilic and thermotolerant crude-oil-degrading actinobacterium isolated from an oil-contaminated mud pit.	Dastgheib SMM, Tirandaz H, Moshtaghi Nikou M, Ramezani M, Shavandi M, Amoozegar MA, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijsem.0.002124	2017
Phylogeny	Prauserella endophytica sp. nov., an endophytic actinobacterium isolated from Tamarix taklamakanensis.	Liu JM, Habden X, Guo L, Tuo L, Jiang ZK, Liu SW, Liu XF, Chen L, Li RF, Zhang YQ, Sun CH	Antonie Van Leeuwenhoek	10.1007/s10482-015-0435-1	2015
Phylogeny	Prauserella coralliicola sp. nov., isolated from the coral Galaxea fascicularis.	Wu JF, Li J, You ZQ, Zhang S	Int J Syst Evol Microbiol	10.1099/ijs.0.062679-0	2014

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21731	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45821
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Prauserella coralliicola (DSM 45821, NBRC 109418, SCSIO 11529)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003202275

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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