Name: Prauserella coralliicola DSM 45821
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130588

Type strain:

Species: Prauserella coralliicola

Culture col. no.: DSM 45821, NBRC 109418, SCSIO 11529

Strain history: <- J. Li, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China; SCSIO 11529

NCBI tax ID(s): 1401264 (species)

SI-ID 403679

DSM 45821

Section

Prauserella coralliicola DSM 45821 is a spore-forming, mesophilic bacterium that was isolated from stony coral Galaxea fascicularis.

spore-forming
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Prauserella*
	Species	**Prauserella coralliicola**
	Full Scientific Name (LPSN)	Prauserella coralliicola Wu et al. 2014

Synonym

Prauserella endophytica

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %91.379

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21731]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #21731]

Culture medium growth

[Ref.: #21731]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21731]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21731]			growth	28 °C

[Ref.: #21731]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %96
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21731]	Sample type/isolated from	stony coral Galaxea fascicularis
[Ref.: #21731]	Host species	Galaxea fascicularis
[Ref.: #21731]	Geographic location (country and/or sea, region)	Hainan province, Sanya, Luhuitou fringing reef (18° 13' N 109° 28' E) at a depth of 5 m
[Ref.: #21731]	Country	China
[Ref.: #21731]	Country ISO 3 Code	CHN
[Ref.: #21731]	Continent	Asia
[Ref.: #21731]	Geographic location	18.2167°/109.4670°
* marker position based on {}

Isolation sources categories

#Host

#Invertebrates (Other)

#Cnidaria (Corals)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF670858 (>99% sequence identity) for Prauserella from Microbeatlas

Aquatic Samples	10
Soil Samples	205
Animal Samples	91
Plant Samples	20
Total Samples	326

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21731]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21731]	Prauserella coralliicola strain SCSIO 11529 16S ribosomal RNA gene, partial sequence	KF670858	1495	ENA	1401264 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Prauserella coralliicola DSM 45821	GCA_003202275	contig	GenBank	1401264 tax ID	*
[Ref.: #66792]	Prauserella coralliicola strain DSM 45821	1401264.3	wgs	PATRIC	1401264 tax ID	*
[Ref.: #66792]	Prauserella coralliicola DSM 45821	2834462815	draft	JGI IMG/M	1401264 tax ID	*

[Ref.: #21731]

GC-content

70.2 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Prauserella coralliicola strain DSM 45821 PATRIC: 1401264.3
[Ref.: #69481]	spore-forming	yes	96	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Prauserella coralliicola strain DSM 45821 PATRIC: 1401264.3
[Ref.: #69480]	motile	no	91.536	no
[Ref.: #69480]	gram-positive	yes	91.069	no
[Ref.: #69480]	anaerobic	no	98.984	no
[Ref.: #69480]	halophile	no	51.892	no
[Ref.: #69480]	spore-forming	yes	79.959	no
[Ref.: #69480]	glucose-util	yes	88.479	no
[Ref.: #69480]	thermophile	no	95.39	no
[Ref.: #69480]	aerobic	yes	93.8	no
[Ref.: #69480]	flagellated	no	96.927	no
[Ref.: #69480]	glucose-ferment	no	93.213	no

Availability in culture collections External links

[Ref.: #21731]

Culture collection no.

DSM 45821, NBRC 109418, SCSIO 11529

[Ref.: #89103]

SI-ID 403679

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Prauserella cavernicola sp. nov., isolated from cave rock.	Suriyachadkun C, Ngaemthao W, Pujchakarn T, Mhuantong W, Chunhametha S	Int J Syst Evol Microbiol	10.1099/ijsem.0.005107	2021	*
Phylogeny	Prauserella flavalba sp. nov., a novel species of the genus Prauserella, isolated from alkaline soil.	Li Q, Ruckert C, Li G, Huang P, Schneider O, Kalinowski J, Jiang Y, Zotchev SB, Jiang C	Int J Syst Evol Microbiol	10.1099/ijsem.0.003768	2020	*
Phylogeny	Prauserella oleivorans sp. nov., a halophilic and thermotolerant crude-oil-degrading actinobacterium isolated from an oil-contaminated mud pit.	Dastgheib SMM, Tirandaz H, Moshtaghi Nikou M, Ramezani M, Shavandi M, Amoozegar MA, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijsem.0.002124	2017	*
Phylogeny	Prauserella endophytica sp. nov., an endophytic actinobacterium isolated from Tamarix taklamakanensis.	Liu JM, Habden X, Guo L, Tuo L, Jiang ZK, Liu SW, Liu XF, Chen L, Li RF, Zhang YQ, Sun CH	Antonie Van Leeuwenhoek	10.1007/s10482-015-0435-1	2015	*
Phylogeny	Prauserella coralliicola sp. nov., isolated from the coral Galaxea fascicularis.	Wu JF, Li J, You ZQ, Zhang S	Int J Syst Evol Microbiol	10.1099/ijs.0.062679-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21731

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45821

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#89103

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403679.1 )

* These data were automatically processed and therefore are not curated

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Prauserella coralliicola strain DSM 45821

Prauserella coralliicola strain DSM 45821

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