Name: Paenibacillus senegalensis JC66
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130511

Type strain:

Species: Paenibacillus senegalensis

Strain Designation: JC66

Culture col. no.: DSM 25958, CSUR P157

Strain history: <- J.-C. Lagier, Timone Hospital, Marseille, France; JC66

NCBI tax ID(s): 1465766 (species)

SI-ID 398788

DSM 25958

Section

Paenibacillus senegalensis JC66 is a mesophilic bacterium that was isolated from stool of a healthy patient.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus senegalensis**
	Full Scientific Name (LPSN)	Paenibacillus senegalensis Mishra et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21713]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #21713]

Culture medium growth

[Ref.: #21713]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21713]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21713]			growth	37 °C

[Ref.: #21713]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21713]	Sample type/isolated from	stool of a healthy patient
[Ref.: #21713]	Country	Senegal
[Ref.: #21713]	Country ISO 3 Code	SEN
[Ref.: #21713]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Infection	#Patient	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JF824808 (>99% sequence identity) for Paenibacillus senegalensis subclade from Microbeatlas

Aquatic Samples	5
Soil Samples	28
Animal Samples	4
Plant Samples	14
Total Samples	51

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21713]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21713]	Paenibacillus senegalensis JC66 16S ribosomal RNA gene, partial sequence	JF824808	1434	ENA	1033743 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Paenibacillus senegalensis JC66	2547132139	draft	JGI IMG/M	1033743 tax ID	*
[Ref.: #66792]	Paenibacillus senegalensis JC66	GCA_000285515	scaffold	GenBank	1033743 tax ID	*

[Ref.: #21713]

GC-content

48.2 mol%

sequence analysis

Availability in culture collections External links

[Ref.: #21713]

Culture collection no.

DSM 25958, CSUR P157

[Ref.: #89034]

SI-ID 398788

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21713

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 25958

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89034

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398788.1 )

* These data were automatically processed and therefore are not curated

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