Name: Acinetobacter gandensis UG 60467
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130452

Type strain:

Species: Acinetobacter gandensis

Strain Designation: UG 60467

Culture col. no.: CCUG 68482, DSM 28097, ANC 4275, LMG 27960

Strain history: <- M. Vaneechoutte, Ghent Univ., Belgium; UG 60467 <- A. Smet, Fac. Vet. Med

NCBI tax ID(s): 1443941 (species)

SI-ID 391386

LMG 27960, DSM 28097, CCUG 68482

Other strains from Acinetobacter gandensis

A. gandensis UG 60716, DSM 28098, LMG 27961, ...
A. gandensis UG 60730, DSM 28099, LMG 27969, ...

Section

Acinetobacter gandensis UG 60467 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from dung of a hospitalized horse, with an illness not associated with the isolate.

Gram-negative
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Moraxellaceae*
	Genus	*Acinetobacter*
	Species	**Acinetobacter gandensis**
	Full Scientific Name (LPSN)	Acinetobacter gandensis Smet et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.969

[Ref.: #21453]	Type of hemolysis	gamma
[Ref.: #21453]	Incubation period	1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21453]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #21453]

Culture medium growth

[Ref.: #21453]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21453]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21453]			growth	37 °C
[Ref.: #63490]			growth	30 °C

[Ref.: #21453]	Temperature range	mesophilic
[Ref.: #63490]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #63490]

Oxygen tolerance

aerobe

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.984

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #21453]	catalase	+	1.11.1.6
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #21453]	23980	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21453]	Sample type/isolated from	dung of a hospitalized horse, with an illness not associated with the isolate
[Ref.: #21453]	Geographic location (country and/or sea, region)	Merelbeke, Gent
[Ref.: #21453]	Country	Belgium
[Ref.: #21453]	Country ISO 3 Code	BEL
[Ref.: #21453]	Continent	Europe

[Ref.: #63490]	Sample type/isolated from	Horse,faeces
[Ref.: #63490]	Sampling date	2012
[Ref.: #63490]	Geographic location (country and/or sea, region)	Merelbeke
[Ref.: #63490]	Country	Belgium
[Ref.: #63490]	Country ISO 3 Code	BEL
[Ref.: #63490]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Infection	#Medical environment	#Clinic
#Host	#Mammals	#Equidae (Horse)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KM206131 (>99% sequence identity) for Acinetobacter gandensis subclade from Microbeatlas

Aquatic Samples	361
Soil Samples	90
Animal Samples	559
Plant Samples	41
Total Samples	1051

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21453]	Acinetobacter gandensis strain UG 60467 16S ribosomal RNA gene, partial sequence	KM206131	1404	ENA	1443941 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acinetobacter gandensis CCUG 68482	GCA_008802205	contig	GenBank	1443941 tax ID	*
[Ref.: #66792]	Acinetobacter gandensis strain CCUG 68482	1443941.6	wgs	PATRIC	1443941 tax ID	*

[Ref.: #21453]

GC-content

39.6 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Acinetobacter gandensis strain CCUG 68482 PATRIC: 1443941.6
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acinetobacter gandensis strain CCUG 68482 PATRIC: 1443941.6
[Ref.: #69480]	motile	no	90.717	no
[Ref.: #69480]	gram-positive	no	97.951	no
[Ref.: #69480]	anaerobic	no	98.82	no
[Ref.: #69480]	halophile	no	88.588	no
[Ref.: #69480]	spore-forming	no	96.631	no
[Ref.: #69480]	thermophile	no	99.901	yes
[Ref.: #69480]	glucose-util	no	87.137	yes
[Ref.: #69480]	aerobic	yes	93.788	no
[Ref.: #69480]	flagellated	no	94.267	no
[Ref.: #69480]	glucose-ferment	no	91.291	yes

Availability in culture collections External links

[Ref.: #21453]

Culture collection no.

CCUG 68482, DSM 28097, ANC 4275, LMG 27960

[Ref.: #88980]

SI-ID 391386

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Acinetobacter gandensis sp. nov. isolated from horse and cattle.	Smet A, Cools P, Krizova L, Maixnerova M, Sedo O, Haesebrouck F, Kempf M, Nemec A, Vaneechoutte M	Int J Syst Evol Microbiol	10.1099/ijs.0.068791-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21453

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28097

#63490 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 68482

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68369

Automatically annotated from API 20NE .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#88980

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID391386.1 )

* These data were automatically processed and therefore are not curated

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Acinetobacter gandensis strain CCUG 68482

Acinetobacter gandensis strain CCUG 68482

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