Micrococcus luteus AE-6 is a bacterium that was isolated from inner tissues of a fresh leaf from Aloe barbadensis .
genome sequence 16S sequence Bacteria| @ref 20215 |
|
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micrococcales |
| Family Micrococcaceae |
| Genus Micrococcus |
| Species Micrococcus luteus |
| Full scientific name Micrococcus luteus (Schroeter 1872) Cohn 1872 (Approved Lists 1980) |
| Synonyms (3) |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | facultative anaerobe | 96.641 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Host | #Plants | #Herbaceous plants (Grass,Crops) | |
| #Host Body-Site | #Plant | #Leaf (Phyllosphere) |
| @ref | Sample type | Host species | Geographic location | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|---|---|
| 21675 | inner tissues of a fresh leaf from Aloe barbadensis (Aloe vera) | Aloe barbadensis | Maharashtra, Pune | India | IND | Asia |
Global distribution of 16S sequence KF524364 (>99% sequence identity) for Micrococcus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|
| 66792 | ASM2266440v1 assembly for Micrococcus aloeverae DSM 27472 | scaffold | 1391911 | 65.6 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 21675 | Micrococcus aloeverae strain AE-6 16S ribosomal RNA gene, partial sequence | KF524364 | 1411 | 1391911 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 21675 | 70 | fluorimetric |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.46 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 96.64 | no |
| 125439 | motility | BacteriaNetⓘ | no | 92.67 | no |
| 125439 | spore_formation | BacteriaNetⓘ | yes | 56.37 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 91.81 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.33 | no |
| 125438 | aerobic | aerobicⓘ | yes | 84.47 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 82.56 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.00 | no |
| 125438 | flagellated | motile2+ⓘ | no | 93.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Draft genome sequence data of Micrococcus yunnanesis strain ORF15-23 from rice rhizosphere soil in Thailand. | Chinachanta K, Chaiwan F, Luu DT, Pathom-Aree W. | Data Brief | 10.1016/j.dib.2024.110466 | 2024 | |
| Unravelling the genetic and functional diversity of dominant bacterial communities involved in manure co-composting bioremediation of complex crude oil waste sludge. | Ubani O, Atagana HI, Selvarajan R, Ogola HJ. | Heliyon | 10.1016/j.heliyon.2022.e08945 | 2022 | ||
| Transcriptome | Partial rpoB Gene Sequencing Identification and Probiotic Potential of Floricoccus penangensis ML061-4 Isolated from Assam Tea (Camellia sinensis var. assamica). | Rungsirivanich P, Inta A, Tragoolpua Y, Thongwai N. | Sci Rep | 10.1038/s41598-019-52979-9 | 2019 | |
| Phylogeny | A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community. | Joseph S, Aduse-Opoku J, Hashim A, Hanski E, Streich R, Knowles SCL, Pedersen AB, Wade WG, Curtis MA. | mSystems | 10.1128/msystems.01222-20 | 2021 | |
| Biotechnology | Optimization of Nutrients and Culture Conditions for Alkaline Protease Production Using Two Endophytic Micrococci: Micrococcus aloeverae and Micrococcus yunnanensis. | Prakash O, Nimonkar Y, Chavadar MS, Bharti N, Pawar S, Sharma A, Shouche YS | Indian J Microbiol | 10.1007/s12088-017-0638-4 | 2017 | |
| Phylogeny | Description of Micrococcus aloeverae sp. nov., an endophytic actinobacterium isolated from Aloe vera. | Prakash O, Nimonkar Y, Munot H, Sharma A, Vemuluri VR, Chavadar MS, Shouche YS | Int J Syst Evol Microbiol | 10.1099/ijs.0.063339-0 | 2014 | |
| Phylogeny | Micrococcus porci sp. nov., Isolated from Feces of Black Pig (Sus scrofa). | Lee AY, Chen CH, Liou JS, Lin YC, Hamada M, Wang YT, Peng LL, Chang SC, Chen CC, Lin CF, Huang L, Huang CH | Life (Basel) | 10.3390/life12111749 | 2022 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #21675 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27472 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
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https://doi.org/10.13145/bacdive130433.20260601.11
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