Name: Micrococcus aloeverae AE-6
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130433

Type strain:

Species: Micrococcus aloeverae

Strain Designation: AE-6

Culture col. no.: DSM 27472, MCC 2184

Strain history: <- O. Prakash, NCCS, Pune, India; AE-6

NCBI tax ID(s): 1391911 (species)

Section

Micrococcus aloeverae AE-6 is a bacterium that was isolated from inner tissues of a fresh leaf from Aloe barbadensis .

16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Micrococcus*
	Species	**Micrococcus aloeverae**
	Full Scientific Name (LPSN)	Micrococcus aloeverae Prakash et al. 2014

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21675]	Sample type/isolated from	inner tissues of a fresh leaf from Aloe barbadensis (Aloe vera)
[Ref.: #21675]	Host species	Aloe barbadensis
[Ref.: #21675]	Geographic location (country and/or sea, region)	Maharashtra, Pune
[Ref.: #21675]	Country	India
[Ref.: #21675]	Country ISO 3 Code	IND
[Ref.: #21675]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Leaf (Phyllosphere)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KF524364 (>99% sequence identity) for Micrococcus from Microbeatlas

Aquatic Samples	9695
Soil Samples	6060
Animal Samples	37863
Plant Samples	3126
Total Samples	56744

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21675]	Micrococcus aloeverae strain AE-6 16S ribosomal RNA gene, partial sequence	KF524364	1411	ENA	1391911 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Micrococcus aloeverae DSM 27472	GCA_022664405	scaffold	GenBank	1391911 tax ID	*

[Ref.: #21675]

GC-content

70 mol%

fluorimetric

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Micrococcus aloeverae DSM 27472 NCBI: GCA_022664405.1
[Ref.: #69480]	flagellated	no	96.897	no
[Ref.: #69480]	gram-positive	yes	91.353	no
[Ref.: #69480]	anaerobic	no	99.029	no
[Ref.: #69480]	aerobic	yes	91.96	no
[Ref.: #69480]	halophile	no	62.657	no
[Ref.: #69480]	spore-forming	no	94.164	no
[Ref.: #69480]	motile	no	95.458	no
[Ref.: #69480]	glucose-ferment	no	91.004	no
[Ref.: #69480]	thermophile	no	95.809	no
[Ref.: #69480]	glucose-util	yes	87.145	no

Availability in culture collections External links

[Ref.: #21675]

Culture collection no.

DSM 27472, MCC 2184

Literature:

Topic	Title	Authors	Journal	DOI	Year
Biotechnology	Optimization of Nutrients and Culture Conditions for Alkaline Protease Production Using Two Endophytic Micrococci: Micrococcus aloeverae and Micrococcus yunnanensis.	Prakash O, Nimonkar Y, Chavadar MS, Bharti N, Pawar S, Sharma A, Shouche YS	Indian J Microbiol	10.1007/s12088-017-0638-4	2017	*
Phylogeny	Description of Micrococcus aloeverae sp. nov., an endophytic actinobacterium isolated from Aloe vera.	Prakash O, Nimonkar Y, Munot H, Sharma A, Vemuluri VR, Chavadar MS, Shouche YS	Int J Syst Evol Microbiol	10.1099/ijs.0.063339-0	2014	*
Phylogeny	Micrococcus porci sp. nov., Isolated from Feces of Black Pig (Sus scrofa).	Lee AY, Chen CH, Liou JS, Lin YC, Hamada M, Wang YT, Peng LL, Chang SC, Chen CC, Lin CF, Huang L, Huang CH	Life (Basel)	10.3390/life12111749	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21675

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27472

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Micrococcus aloeverae DSM 27472

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