Name: Pseudomonas savastanoi 277
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 12932

Type strain:

Species: Pseudomonas savastanoi

Strain Designation: 277, 64

Culture col. no.: DSM 50298, ATCC 13492, DSM 60228, NCPPB 64, CCUG 2171, LMG 5011

Strain history: <- H. Stolp; 277 <- M.E. Rhodes <- W.J. Dowson; 64 <- M. de C. d'Oliveira

NCBI tax ID(s): 29438 (species)

SI-ID 4563

LMG 5011, ATCC 13492, CCUG 2171, DSM 50298, DSM 60228, NCPPB 64, CECT 5019, CFBP 5050

Special Collections

DSMZ
CCUG

Other strains from Pseudomonas savastanoi

Section

Pseudomonas savastanoi 277 is a plant pathogen that was isolated from Olea europaea.

plant pathogen
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas savastanoi**
	Full Scientific Name (LPSN)	Pseudomonas savastanoi (Janse 1982 ex Smith 1908) Gardan et al. 1992

Synonym

Pseudomonas syringae subsp. savastanoi

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12703]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #12703]

Culture medium growth

[Ref.: #12703]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12703]

Culture medium composition

expand / minimize

[Ref.: #12703]

Culture medium

GLUCOSE YEAST EXTRACT MEDIUM (DSMZ Medium 54)

[Ref.: #12703]

Culture medium growth

[Ref.: #12703]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12703]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #12703]			growth	26 °C

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	adipate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-mannose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	L-arabinose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	maltose ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	N-acetylglucosamine ChEBI	-	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	-	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #68369]	cytochrome oxidase	-	1.9.3.1	* from API 20NE
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68369]	urease	-	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #12703]	22955	-	-	-	-	-	-	-	-	+	-	+	+	-	-	+	-	-	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12703]	Sample type/isolated from	Olea europaea
[Ref.: #12703]	Host species	Olea europaea
[Ref.: #12703]	Country	Portugal
[Ref.: #12703]	Country ISO 3 Code	PRT
[Ref.: #12703]	Continent	Europe

[Ref.: #44507]	Sample type/isolated from	Olive (Olea europaea)
[Ref.: #44507]	Sampling date	1954
[Ref.: #44507]	Country	Portugal
[Ref.: #44507]	Country ISO 3 Code	PRT
[Ref.: #44507]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host

#Plants

#Tree

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12703]	Pathogenicity (plant)	yes
[Ref.: #12703]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Pseudomonas savastanoi pv. savastanoi strain NCPPB-64 clone 1 16S ribosomal RNA gene, partial sequence	DQ463682	547	GenBank ENA	360920 tax ID	*
[Ref.: #20218]	Pseudomonas savastanoi pv. savastanoi strain NCPPB-64 clone 2 16S ribosomal RNA gene, partial sequence	DQ463683	665	GenBank ENA	360920 tax ID	*

Availability in culture collections External links

[Ref.: #12703]

Culture collection no.

DSM 50298, ATCC 13492, DSM 60228, NCPPB 64, CCUG 2171, LMG 5011

[Ref.: #82144]

SI-ID 4563

References

#12703

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50298

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#44507 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2171

#68369

Automatically annotated from API 20NE .

#82144

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID4563.1 )

* These data were automatically processed and therefore are not curated

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