Name: Pseudoalteromonas telluritireducens Se-1-2-red
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 12697

Type strain:

Species: Pseudoalteromonas telluritireducens

Strain Designation: Se-1-2-red

Culture col. no.: DSM 16098, VKM B-2382

Strain history: <- V. Yurkov; Se-1-2-red

NCBI tax ID(s): 162160 (species)

Section

Pseudoalteromonas telluritireducens Se-1-2-red is a mesophilic, motile bacterium that was isolated from near deep ocean hydrothermal vent.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Pseudoalteromonadaceae*
	Genus	*Pseudoalteromonas*
	Species	"Pseudoalteromonas telluritireducens"
	Full Scientific Name (LPSN)	Pseudoalteromonas telluritireducens Rathgeber et al. 2006

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.997

[Ref.: #69480]	Motility	yes Confidence in %98.356

Information on culture and growth conditions Culture and growth conditions

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Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6293]			growth	30 °C

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Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.992

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6293]	Sample type/isolated from	near deep ocean hydrothermal vent
[Ref.: #6293]	Geographic location (country and/or sea, region)	Pacific Ocean, Juan de Fuca Ridge
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Hydrothermal vent
#Environmental	#Aquatic	#Marine
#Condition	#Thermophilic (>45°C)	-

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6293]	Pseudoalteromonas sp. SE1-2red 16S rRNA gene, strain SE1-2red	AJ314845	1503	ENA	162160 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudoalteromonas telluritireducens DSM 16098	GCA_001596795	contig	GenBank	162160 tax ID	*
[Ref.: #66792]	Pseudoalteromonas telluritireducens strain DSM 16098	162160.3	wgs	PATRIC	162160 tax ID	*
[Ref.: #66792]	Pseudoalteromonas telluritireducens DSM 16098	2724679213	draft	JGI IMG/M	162160 tax ID	*

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GC-content

39.9 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pseudoalteromonas telluritireducens strain DSM 16098 PATRIC: 162160.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudoalteromonas telluritireducens strain DSM 16098 PATRIC: 162160.3
[Ref.: #69480]	motile	yes	92.452	no
[Ref.: #69480]	gram-positive	no	99.001	no
[Ref.: #69480]	anaerobic	no	97.848	no
[Ref.: #69480]	aerobic	yes	91.045	no
[Ref.: #69480]	halophile	yes	65.256	no
[Ref.: #69480]	spore-forming	no	95.527	no
[Ref.: #69480]	thermophile	no	99.25	yes
[Ref.: #69480]	glucose-util	yes	93.435	no
[Ref.: #69480]	flagellated	yes	87.569	no
[Ref.: #69480]	glucose-ferment	no	78.582	no

Availability in culture collections External links

[Ref.: #6293]

Culture collection no.

DSM 16098, VKM B-2382

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft Genome Sequences of Pseudoalteromonas telluritireducens DSM 16098 and P. spiralis DSM 16099 Isolated from the Hydrothermal Vents of the Juan de Fuca Ridge.	Zhang H, Liu R, Wang M, Wang H, Gao Q, Hou Z, Zhou Z, Gao D, Wang L	Genome Announc	10.1128/genomeA.00871-16	2016	*
Phylogeny	Metalloid reducing bacteria isolated from deep ocean hydrothermal vents of the Juan de Fuca Ridge, Pseudoalteromonas telluritireducens sp. nov. and Pseudoalteromonas spiralis sp. nov.	Rathgeber C, Yurkova N, Stackebrandt E, Schumann P, Humphrey E, Beatty JT, Yurkov V	Curr Microbiol	10.1007/s00284-006-0320-2	2006	*

References

#6293

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16098

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Pseudoalteromonas telluritireducens strain DSM 16098

Pseudoalteromonas telluritireducens strain DSM 16098

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