"Pseudoalteromonas telluritireducens" Se-1-2-red is a bacterium that was isolated from near deep ocean hydrothermal vent.
genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Alteromonadales |
| Family Pseudoalteromonadaceae |
| Genus Pseudoalteromonas |
| Species "Pseudoalteromonas telluritireducens" |
| Full scientific name Pseudoalteromonas telluritireducens Rathgeber et al. 2006 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 6293 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | Medium recipe at MediaDive | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514; with strain-specific modifications) Composition: NaCl 19.45 g/l Na acetate 10.0 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 6293 | positive | growth | 30 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Environmental | #Aquatic | #Hydrothermal vent | |
| #Environmental | #Aquatic | #Marine | |
| #Condition | #Thermophilic (>45°C) | - |
| @ref | Sample type | Geographic location | |
|---|---|---|---|
| 6293 | near deep ocean hydrothermal vent | Pacific Ocean, Juan de Fuca Ridge |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM159679v1 assembly for Pseudoalteromonas agarivorans DSM 16098 | contig | 162160 | 61.76 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 6293 | Pseudoalteromonas sp. SE1-2red 16S rRNA gene, strain SE1-2red | AJ314845 | 1503 | 162160 |
| 6293 | GC-content (mol%)39.9 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.50 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 58.50 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.60 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 99.30 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 100.00 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.80 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 86.83 | no |
| 125438 | aerobic | aerobicⓘ | yes | 75.75 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.50 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 84.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Characterization and Diversity Analysis of the Extracellular Proteases of Thermophilic Anoxybacillus caldiproteolyticus 1A02591 From Deep-Sea Hydrothermal Vent Sediment. | Cheng JH, Wang Y, Zhang XY, Sun ML, Zhang X, Song XY, Zhang YZ, Zhang Y, Chen XL. | Front Microbiol | 10.3389/fmicb.2021.643508 | 2021 | ||
| Biotechnology | The tellurite-reducing bacterium Alteromonas macleodii from a culture of the toxic dinoflagellate Prorocentrum foraminosum. | Beleneva IA, Efimova KV, Eliseikina MG, Svetashev VI, Orlova TY. | Heliyon | 10.1016/j.heliyon.2019.e02435 | 2019 | |
| Genetics | Draft Genome Sequences of Pseudoalteromonas telluritireducens DSM 16098 and P. spiralis DSM 16099 Isolated from the Hydrothermal Vents of the Juan de Fuca Ridge. | Zhang H, Liu R, Wang M, Wang H, Gao Q, Hou Z, Zhou Z, Gao D, Wang L | Genome Announc | 10.1128/genomeA.00871-16 | 2016 | |
| Phylogeny | Metalloid reducing bacteria isolated from deep ocean hydrothermal vents of the Juan de Fuca Ridge, Pseudoalteromonas telluritireducens sp. nov. and Pseudoalteromonas spiralis sp. nov. | Rathgeber C, Yurkova N, Stackebrandt E, Schumann P, Humphrey E, Beatty JT, Yurkov V | Curr Microbiol | 10.1007/s00284-006-0320-2 | 2006 |
| #6293 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16098 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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https://doi.org/10.13145/bacdive12697.20251217.10
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BacDive in 2025: the core database for prokaryotic strain data