Name: Pseudoalteromonas distincta DSM 26439
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 12692

Type strain:

Species: Pseudoalteromonas distincta

Culture col. no.: DSM 26439, ATCC BAA-322, KMM 3548, LMG 19694

Strain history: 2002, E. Ivanova, Swinburne Inst., Victoria, Australia

NCBI tax ID(s): 1315279 (strain), 77608 (species)

SI-ID 264387

LMG 19696, ATCC BAA-322, DSM 14403, CIP 107732

Other strains from Pseudoalteromonas distincta

P. distincta DSM 12749, ATCC 700518, CIP 105340, ... (type strain)

Section

Pseudoalteromonas distincta DSM 26439 is a mesophilic, motile bacterium that was isolated from sponge Paragorgia arborea.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Pseudoalteromonadaceae*
	Genus	*Pseudoalteromonas*
	Species	**Pseudoalteromonas distincta**
	Full Scientific Name (LPSN)	Pseudoalteromonas distincta (Romanenko et al. 1995) Ivanova et al. 2000

	Synonym	Pseudoalteromonas paragorgicola
	Synonym	Alteromonas distincta

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.99

[Ref.: #69480]	Motility	yes Confidence in %97.7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #18223]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #18223]

Culture medium growth

[Ref.: #18223]

Culture medium link

Medium recipe at MediaDive

[Ref.: #18223]

Culture medium composition

expand / minimize

[Ref.: #42045]

Culture medium

Marine agar (MA)

[Ref.: #42045]

Culture medium growth

[Ref.: #42045]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #18223]			growth	28 °C
[Ref.: #42045]			growth	20 °C

[Ref.: #18223]	Temperature range	mesophilic
[Ref.: #42045]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.972

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18223]	Sample type/isolated from	sponge Paragorgia arborea
[Ref.: #18223]	Host species	Paragorgia arborea
[Ref.: #18223]	Geographic location (country and/or sea, region)	Kuril Islands, Onekotan
* marker position based on {}

Isolation sources categories

#Host

#Invertebrates (Other)

#Porifera (Sponges)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY040229 (>99% sequence identity) for Pseudoalteromonas from Microbeatlas

Aquatic Samples	2792
Soil Samples	24
Animal Samples	384
Plant Samples	22
Total Samples	3222

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18223]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18223]	Pseudoalteromonas sp. KMM 3548 16S ribosomal RNA gene, partial sequence	AY040229	1506	ENA	166934 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudoalteromonas distincta KMM 3548	GCA_014918315	chromosome	GenBank	1315279 tax ID	*
[Ref.: #66792]	Pseudoalteromonas paragorgicola KMM 3548	1315279.3	wgs	PATRIC	1315279 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Pseudoalteromonas paragorgicola KMM 3548 KMM 3548 NCBI: GCA_014918315.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudoalteromonas paragorgicola KMM 3548 KMM 3548 NCBI: GCA_014918315.1
[Ref.: #69480]	motile	yes	92.075	no
[Ref.: #69480]	flagellated	yes	84.984	no
[Ref.: #69480]	gram-positive	no	99.338	no
[Ref.: #69480]	anaerobic	no	97.387	no
[Ref.: #69480]	aerobic	yes	88.138	no
[Ref.: #69480]	halophile	yes	59.772	no
[Ref.: #69480]	spore-forming	no	95.92	no
[Ref.: #69480]	glucose-util	yes	93.505	no
[Ref.: #69480]	thermophile	no	98.661	no
[Ref.: #69480]	glucose-ferment	no	77.703	no

Availability in culture collections External links

[Ref.: #18223]

Culture collection no.

DSM 26439, ATCC BAA-322, KMM 3548, LMG 19694

[Ref.: #81904]

SI-ID 264387

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Genome-Based Classification of Strain 16-SW-7, a Marine Bacterium Capable of Converting B Red Blood Cells, as Pseudoalteromonas distincta and Proposal to Reclassify Pseudoalteromonas paragorgicola as a Later Heterotypic Synonym of Pseudoalteromonas distincta.	Nedashkovkaya OI, Kim SG, Balabanova LA, Zhukova NV, Son OM, Tekutyeva LA, Mikhailov VV	Front Microbiol	10.3389/fmicb.2021.809431	2022	*
Phylogeny	Pseudoalteromonas translucida sp. nov. and Pseudoalteromonas paragorgicola sp. nov., and emended description of the genus.	Ivanova EP, Sawabe T, Lysenko AM, Gorshkova NM, Hayashi K, Zhukova NV, Nicolau DV, Christen R, Mikhailov VV	Int J Syst Evol Microbiol	10.1099/00207713-52-5-1759	2002	*

References

#18223

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26439

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42045 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#81904

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID264387.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Pseudoalteromonas paragorgicola in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Pseudoalteromonas paragorgicola KMM 3548 KMM 3548

Pseudoalteromonas paragorgicola KMM 3548 KMM 3548

Change proposal

Change proposal