Acidithiobacillus thiooxidans 3/TA is a mesophilic, Gram-negative, motile prokaryote that was isolated from Kimmeridge clay.
Gram-negative motile rod-shaped mesophilic genome sequence 16S sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Acidithiobacillia |
| Order Acidithiobacillales |
| Family Acidithiobacillaceae |
| Genus Acidithiobacillus |
| Species Acidithiobacillus thiooxidans |
| Full scientific name Acidithiobacillus thiooxidans (Waksman and Joffe 1922) Kelly and Wood 2000 |
| Synonyms (3) |
| BacDive ID | Other strains from Acidithiobacillus thiooxidans (9) | Type strain |
|---|---|---|
| 121 | A. thiooxidans DSM 504, ATCC 8085, IFO 12544, NBRC 12544, ... | |
| 122 | A. thiooxidans GP5, DSM 622 | |
| 123 | A. thiooxidans B-S2, DSM 9463 | |
| 124 | A. thiooxidans Tth04, DSM 11478 | |
| 132685 | A. thiooxidans CLST, DSM 103717 | |
| 137426 | A. thiooxidans CIP 104766, ATCC 19703, NCIMB 8345 | |
| 164862 | A. thiooxidans JCM 3868, ATCC 15494 | |
| 165618 | A. thiooxidans JCM 7813 | |
| 165619 | A. thiooxidans JCM 7814 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 5601 | ACIDITHIOBACILLUS THIOOXIDANS MEDIUM (DSMZ Medium 71) | Medium recipe at MediaDive | Name: ACIDITHIOBACILLUS THIOOXIDANS MEDIUM (DSMZ Medium 71) Composition: Na2S2O3 x 5 H2O 5.0 g/l (NH4)2SO4 3.0 g/l KH2PO4 3.0 g/l MgSO4 x 7 H2O 0.5 g/l CaCl2 x 2 H2O 0.25 g/l Distilled water | ||
| 35699 | MEDIUM 124 - for Thiobacillus | Distilled water make up to (1000.000 ml);ManganeseII chloride tetrahydrate(2.000 mg);Magnesium sulphate heptahydrate (0.100 g);Calcium chloride dihydrate (0.100 g);Agar (12.000 g);Ammonium sulphate (0.100 g);Potassium di-hydrogen phosphate (4.000 g);Sodiu | |||
| 123524 | CIP Medium 124 | Medium recipe at CIP | |||
| 123524 | CIP Medium 249 | Medium recipe at CIP |
| 67770 | Observationquinones: Q-8 |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 123524 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | - | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 123524 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 123524 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 123524 | gelatinase | - | ||
| 68382 | leucine arylamidase | - | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 123524 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 123524 | ornithine decarboxylase | - | 4.1.1.17 | |
| 123524 | oxidase | - | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68382 | valine arylamidase | - | from API zym |
Global distribution of 16S sequence Y11596 (>99% sequence identity) for Acidithiobacillus from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM966247v1 assembly for Acidithiobacillus thiooxidans ATCC 19377 | complete | 637390 | 94.6 | ||||
| 67770 | ASM671828v1 assembly for Acidithiobacillus thiooxidans ATCC 19377 | scaffold | 637390 | 60.34 | ||||
| 67770 | ASM22721v2 assembly for Acidithiobacillus thiooxidans ATCC 19377 | contig | 637390 | 42.42 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Acidithiobacillus thiooxidans gene, 16S-23S rDNA region, strain: JCM 3867 | AB189141 | 456 | 930 | ||
| 20218 | Acidithiobacillus thiooxidans strain ATCC 19377 16S ribosomal RNA gene, partial sequence; intergenic spacer, tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence | AF512812 | 514 | 637390 | ||
| 20218 | Acidithiobacillus thiooxidans 16S rRNA gene, strain ATCC 19377 | AJ459803 | 1434 | 637390 | ||
| 20218 | Acidithiobacillus thiooxidans strain ATCC 19377 16S ribosomal RNA gene, partial sequence | AY552087 | 1485 | 637390 | ||
| 20218 | Acidithiobacillus thiooxidans strain ATCC 19377 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | EF059790 | 632 | 637390 | ||
| 20218 | Acidithiobacillus thiooxidans 16S ribosomal RNA (16S rRNA)s and 16S ribosomal RNA, complete sequence | AH001789 | 355 | 930 | ||
| 5601 | Acidithiobacillus thiooxidans 16S rRNA gene, type strain ATCC19377 | Y11596 | 1472 | 930 | ||
| 124043 | Acidithiobacillus thiooxidans ATCC 19377 16S ribosomal RNA gene, partial sequence. | MN585129 | 785 | 637390 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.40 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 65.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.20 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 68.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 96.97 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 83.25 | no |
| 125438 | aerobic | aerobicⓘ | yes | 56.79 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 91.22 | no |
| 125438 | thermophilic | thermophileⓘ | no | 90.36 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 64.32 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Phosphorus Recovery from Sewage Sludge Using Acidithiobacilli. | Pradhan SK, Heinonen-Tanski H, Veijalainen AM, Peraniemi S, Torvinen E. | Int J Environ Res Public Health | 10.3390/ijerph18137135 | 2021 | ||
| Roles and Regulation of Quorum Sensing of Acidophiles in Bioleaching: A Review. | Luo W, Li Y, Chen S, Liang Y, Liu X. | Microorganisms | 10.3390/microorganisms12030422 | 2024 | ||
| A novel closed-loop biotechnology for recovery of cobalt from a lithium-ion battery active cathode material. | Pakostova E, Graves J, Latvyte E, Maddalena G, Horsfall L. | Microbiology (Reading) | 10.1099/mic.0.001475 | 2024 | ||
| Phylogeny | Succession of sulfur-oxidizing bacteria in the microbial community on corroding concrete in sewer systems. | Okabe S, Odagiri M, Ito T, Satoh H. | Appl Environ Microbiol | 10.1128/aem.02054-06 | 2007 | |
| Phylogeny | Isolation, characterization, and in situ detection of a novel chemolithoautotrophic sulfur-oxidizing bacterium in wastewater biofilms growing under microaerophilic conditions. | Ito T, Sugita K, Okabe S. | Appl Environ Microbiol | 10.1128/aem.70.5.3122-3129.2004 | 2004 | |
| Deciphering the enigmatic PilY1 of Acidithiobacillus thiooxidans: An in silico analysis. | Hernandez-Sanchez A, Paez-Perez ED, Alfaro-Saldana E, Garcia-Meza JV. | Biochem Biophys Rep | 10.1016/j.bbrep.2024.101797 | 2024 | ||
| Enzymology | Understanding a Core Pilin of the Type IVa Pili of Acidithiobacillus thiooxidans, PilV. | Hernandez-Sanchez A, Paez-Perez ED, Alfaro-Saldana E, Olivares-Illana V, Garcia-Meza JV. | J Microbiol Biotechnol | 10.4014/jmb.2310.10033 | 2024 | |
| Metabolism | Comparative Genomics of Sigma Factors in Acidithiobacillia Sheds Light into the Transcriptional Regulatory Networks Involved in Biogeochemical Dynamics in Extreme Acidic Environments. | Sepulveda-Rebolledo P, Gonzalez-Rosales C, Dopson M, Perez-Rueda E, Holmes DS, Valdes JH. | Microorganisms | 10.3390/microorganisms13061199 | 2025 | |
| Pangenome-level analysis of nucleoid-associated proteins in the Acidithiobacillia class: insights into their functional roles in mobile genetic elements biology. | Beard S, Moya-Beltran A, Silva-Garcia D, Valenzuela C, Perez-Acle T, Loyola A, Quatrini R. | Front Microbiol | 10.3389/fmicb.2023.1271138 | 2023 | ||
| Genetics | In Silico Genome-Wide Analysis Reveals the Potential Links Between Core Genome of Acidithiobacillus thiooxidans and Its Autotrophic Lifestyle. | Zhang X, Liu Z, Wei G, Yang F, Liu X. | Front Microbiol | 10.3389/fmicb.2018.01255 | 2018 | |
| Genetics | Integrative Assessments on Molecular Taxonomy of Acidiferrobacter thiooxydans ZJ and Its Environmental Adaptation Based on Mobile Genetic Elements. | Ma L, Yang W, Huang S, Liu R, Li H, Huang X, Xiong J, Liu X. | Front Microbiol | 10.3389/fmicb.2022.826829 | 2022 | |
| Phylogeny | Sequence analysis and confirmation of the type IV pili-associated proteins PilY1, PilW and PilV in Acidithiobacillus thiooxidans. | Alfaro-Saldana E, Hernandez-Sanchez A, Patron-Soberano OA, Astello-Garcia M, Mendez-Cabanas JA, Garcia-Meza JV. | PLoS One | 10.1371/journal.pone.0199854 | 2019 | |
| Genetics | Comparative Genomics of the Extreme Acidophile Acidithiobacillus thiooxidans Reveals Intraspecific Divergence and Niche Adaptation. | Zhang X, Feng X, Tao J, Ma L, Xiao Y, Liang Y, Liu X, Yin H. | Int J Mol Sci | 10.3390/ijms17081355 | 2016 | |
| From Genes to Bioleaching: Unraveling Sulfur Metabolism in Acidithiobacillus Genus. | Ibanez A, Garrido-Chamorro S, Coque JJR, Barreiro C. | Genes (Basel) | 10.3390/genes14091772 | 2023 | ||
| Genetics | Genome sequencing and metabolic network reconstruction of a novel sulfur-oxidizing bacterium Acidithiobacillus Ameehan. | Wu P, Yuan Q, Cheng T, Han Y, Zhao W, Liao X, Wang L, Cai J, He Q, Guo Y, Zhang X, Lu F, Wang J, Ma H, Huang Z. | Front Microbiol | 10.3389/fmicb.2023.1277847 | 2023 | |
| Biofilm Formation by the Acidophile Bacterium Acidithiobacillus thiooxidans Involves c-di-GMP Pathway and Pel exopolysaccharide. | Diaz M, Castro M, Copaja S, Guiliani N. | Genes (Basel) | 10.3390/genes9020113 | 2018 | ||
| Draft Genome Sequence of the Extremophile Acidithiobacillus thiooxidans A01, Isolated from the Wastewater of a Coal Dump. | Yin H, Zhang X, Liang Y, Xiao Y, Niu J, Liu X. | Genome Announc | 10.1128/genomea.00222-14 | 2014 | ||
| New Sulfur Organic Polymer-Concrete Composites Containing Waste Materials: Mechanical Characteristics and Resistance to Biocorrosion. | Gutarowska B, Kotynia R, Bielinski D, Anyszka R, Wreczycki J, Piotrowska M, Kozirog A, Berlowska J, Dziugan P. | Materials (Basel) | 10.3390/ma12162602 | 2019 | ||
| Phosphate Favors the Biosynthesis of CdS Quantum Dots in Acidithiobacillus thiooxidans ATCC 19703 by Improving Metal Uptake and Tolerance. | Ulloa G, Quezada CP, Araneda M, Escobar B, Fuentes E, Alvarez SA, Castro M, Bruna N, Espinoza-Gonzalez R, Bravo D, Perez-Donoso JM. | Front Microbiol | 10.3389/fmicb.2018.00234 | 2018 | ||
| Metabolism | Putative bacterial interactions from metagenomic knowledge with an integrative systems ecology approach. | Bordron P, Latorre M, Cortes MP, Gonzalez M, Thiele S, Siegel A, Maass A, Eveillard D. | Microbiologyopen | 10.1002/mbo3.315 | 2016 | |
| Genetics | Bioinformatic Analyses of Unique (Orphan) Core Genes of the Genus Acidithiobacillus: Functional Inferences and Use As Molecular Probes for Genomic and Metagenomic/Transcriptomic Interrogation. | Gonzalez C, Lazcano M, Valdes J, Holmes DS. | Front Microbiol | 10.3389/fmicb.2016.02035 | 2016 | |
| Structural and mechanism-based engineering of sulfotransferase CHST15 for the efficient synthesis of chondroitin sulfate E. | Wang Z, Song W, Wei W, Qi H, Meng W, Liu J, Li X, Gao C, Liu L, Hu G, Zhou Y, Wu J. | Appl Environ Microbiol | 10.1128/aem.01573-24 | 2025 | ||
| Genetics | Integrative Genomics Sheds Light on Evolutionary Forces Shaping the Acidithiobacillia Class Acidophilic Lifestyle. | Gonzalez-Rosales C, Vergara E, Dopson M, Valdes JH, Holmes DS. | Front Microbiol | 10.3389/fmicb.2021.822229 | 2021 | |
| Draft genome sequence of Acidithiobacillus thiooxidans CLST isolated from the acidic hypersaline Gorbea salt flat in northern Chile. | Quatrini R, Escudero LV, Moya-Beltran A, Galleguillos PA, Issotta F, Acosta M, Cardenas JP, Nunez H, Salinas K, Holmes DS, Demergasso C. | Stand Genomic Sci | 10.1186/s40793-017-0305-8 | 2017 | ||
| Acidithiobacillus sp. applied to sewage sludge bioleaching: perspectives for process optimization through the establishment of optimal operational parameters. | do Nascimento LP, Goncalves J, Duarte IC. | 3 Biotech | 10.1007/s13205-022-03354-5 | 2022 | ||
| Phylogeny | Insights into Adaptive Mechanisms of Extreme Acidophiles Based on Quorum Sensing/Quenching-Related Proteins. | Huang S, Liu X, Yang W, Ma L, Li H, Liu R, Qiu J, Li Y. | mSystems | 10.1128/msystems.01491-21 | 2022 | |
| Metabolism | Whole-genome sequencing reveals novel insights into sulfur oxidation in the extremophile Acidithiobacillus thiooxidans. | Yin H, Zhang X, Li X, He Z, Liang Y, Guo X, Hu Q, Xiao Y, Cong J, Ma L, Niu J, Liu X. | BMC Microbiol | 10.1186/1471-2180-14-179 | 2014 | |
| Metabolism | Biogeography of sulfur-oxidizing Acidithiobacillus populations in extremely acidic cave biofilms. | Jones DS, Schaperdoth I, Macalady JL. | ISME J | 10.1038/ismej.2016.74 | 2016 | |
| Metabolism | The Two-Component System RsrS-RsrR Regulates the Tetrathionate Intermediate Pathway for Thiosulfate Oxidation in Acidithiobacillus caldus. | Wang ZB, Li YQ, Lin JQ, Pang X, Liu XM, Liu BQ, Wang R, Zhang CJ, Wu Y, Lin JQ, Chen LX. | Front Microbiol | 10.3389/fmicb.2016.01755 | 2016 | |
| Genetics | Omics on bioleaching: current and future impacts. | Martinez P, Vera M, Bobadilla-Fazzini RA. | Appl Microbiol Biotechnol | 10.1007/s00253-015-6903-8 | 2015 | |
| Extremophilic Exopolysaccharides: Biotechnologies and Wastewater Remediation. | Banerjee A, Sarkar S, Govil T, Gonzalez-Faune P, Cabrera-Barjas G, Bandopadhyay R, Salem DR, Sani RK. | Front Microbiol | 10.3389/fmicb.2021.721365 | 2021 | ||
| Metabolism | Diversity and ecophysiology of new isolates of extremely acidophilic CS2-converting Acidithiobacillus strains. | Smeulders MJ, Pol A, Zandvoort MH, Jetten MS, Op den Camp HJ. | Appl Environ Microbiol | 10.1128/aem.02167-13 | 2013 | |
| Comparative Genomic Analysis of Soil Dwelling Bacteria Utilizing a Combinational Codon Usage and Molecular Phylogenetic Approach Accentuating on Key Housekeeping Genes. | Saha J, Saha BK, Pal Sarkar M, Roy V, Mandal P, Pal A. | Front Microbiol | 10.3389/fmicb.2019.02896 | 2019 | ||
| Cyanuric acid hydrolase: evolutionary innovation by structural concatenation. | Peat TS, Balotra S, Wilding M, French NG, Briggs LJ, Panjikar S, Cowieson N, Newman J, Scott C. | Mol Microbiol | 10.1111/mmi.12249 | 2013 | ||
| Metabolism | Discovery of a new subgroup of sulfur dioxygenases and characterization of sulfur dioxygenases in the sulfur metabolic network of Acidithiobacillus caldus. | Wu W, Pang X, Lin J, Liu X, Wang R, Lin J, Chen L. | PLoS One | 10.1371/journal.pone.0183668 | 2017 | |
| Codon usage bias reveals genomic adaptations to environmental conditions in an acidophilic consortium. | Hart A, Cortes MP, Latorre M, Martinez S. | PLoS One | 10.1371/journal.pone.0195869 | 2018 | ||
| Pathogenicity | Microbial copper resistance: importance in biohydrometallurgy. | Martinez-Bussenius C, Navarro CA, Jerez CA. | Microb Biotechnol | 10.1111/1751-7915.12450 | 2017 | |
| Phylogeny | Molecular Systematics of the Genus Acidithiobacillus: Insights into the Phylogenetic Structure and Diversification of the Taxon. | Nunez H, Moya-Beltran A, Covarrubias PC, Issotta F, Cardenas JP, Gonzalez M, Atavales J, Acuna LG, Johnson DB, Quatrini R. | Front Microbiol | 10.3389/fmicb.2017.00030 | 2017 | |
| Genetics | Comparative Genomic Analysis Reveals the Distribution, Organization, and Evolution of Metal Resistance Genes in the Genus Acidithiobacillus. | Li L, Liu Z, Meng D, Liu X, Li X, Zhang M, Tao J, Gu Y, Zhong S, Yin H. | Appl Environ Microbiol | 10.1128/aem.02153-18 | 2019 | |
| Proteome | Structure and identification of a pterin dehydratase-like protein as a ribulose-bisphosphate carboxylase/oxygenase (RuBisCO) assembly factor in the alpha-carboxysome. | Wheatley NM, Sundberg CD, Gidaniyan SD, Cascio D, Yeates TO. | J Biol Chem | 10.1074/jbc.m113.531236 | 2014 | |
| Metabolism | From Laboratory towards Industrial Operation: Biomarkers for Acidophilic Metabolic Activity in Bioleaching Systems. | Marin S, Cortes M, Acosta M, Delgado K, Escuti C, Ayma D, Demergasso C. | Genes (Basel) | 10.3390/genes12040474 | 2021 | |
| Metabolism | The sulfur oxygenase reductase from the mesophilic bacterium Halothiobacillus neapolitanus is a highly active thermozyme. | Veith A, Botelho HM, Kindinger F, Gomes CM, Kletzin A. | J Bacteriol | 10.1128/jb.06531-11 | 2012 | |
| Metabolism | Biomarker panels for characterizing microbial community biofilm formation as composite molecular process. | Bosse M, Heuwieser A, Heinzel A, Lukas A, Oliveira G, Mayer B. | PLoS One | 10.1371/journal.pone.0202032 | 2018 | |
| Metabolism | Genes and pathways for CO2 fixation in the obligate, chemolithoautotrophic acidophile, Acidithiobacillus ferrooxidans, carbon fixation in A. ferrooxidans. | Esparza M, Cardenas JP, Bowien B, Jedlicki E, Holmes DS. | BMC Microbiol | 10.1186/1471-2180-10-229 | 2010 | |
| Permanent draft genome of Thiobacillus thioparus DSM 505T, an obligately chemolithoautotrophic member of the Betaproteobacteria. | Hutt LP, Huntemann M, Clum A, Pillay M, Palaniappan K, Varghese N, Mikhailova N, Stamatis D, Reddy T, Daum C, Shapiro N, Ivanova N, Kyrpides N, Woyke T, Boden R. | Stand Genomic Sci | 10.1186/s40793-017-0229-3 | 2017 | ||
| Sulfur Oxidation in the Acidophilic Autotrophic Acidithiobacillus spp. | Wang R, Lin JQ, Liu XM, Pang X, Zhang CJ, Yang CL, Gao XY, Lin CM, Li YQ, Li Y, Lin JQ, Chen LX. | Front Microbiol | 10.3389/fmicb.2018.03290 | 2018 | ||
| The chromosomal arsenic resistance genes of Thiobacillus ferrooxidans have an unusual arrangement and confer increased arsenic and antimony resistance to Escherichia coli. | Butcher BG, Deane SM, Rawlings DE. | Appl Environ Microbiol | 10.1128/aem.66.5.1826-1833.2000 | 2000 | ||
| Phylogeny | Development and application of small-subunit rRNA probes for assessment of selected Thiobacillus species and members of the genus Acidiphilium. | Peccia J, Marchand EA, Silverstein J, Hernandez M. | Appl Environ Microbiol | 10.1128/aem.66.7.3065-3072.2000 | 2000 | |
| Metabolism | Microbial iron management mechanisms in extremely acidic environments: comparative genomics evidence for diversity and versatility. | Osorio H, Martinez V, Nieto PA, Holmes DS, Quatrini R. | BMC Microbiol | 10.1186/1471-2180-8-203 | 2008 | |
| Metabolism | Immobilization of arsenite and ferric iron by Acidithiobacillus ferrooxidans and its relevance to acid mine drainage. | Duquesne K, Lebrun S, Casiot C, Bruneel O, Personne JC, Leblanc M, Elbaz-Poulichet F, Morin G, Bonnefoy V. | Appl Environ Microbiol | 10.1128/aem.69.10.6165-6173.2003 | 2003 | |
| Phylogeny | Cultural and phylogenetic analysis of mixed microbial populations found in natural and commercial bioleaching environments. | Goebel BM, Stackebrandt E. | Appl Environ Microbiol | 10.1128/aem.60.5.1614-1621.1994 | 1994 | |
| A Tn7-like transposon is present in the glmUS region of the obligately chemoautolithotrophic bacterium Thiobacillus ferrooxidans. | Oppon JC, Sarnovsky RJ, Craig NL, Rawlings DE. | J Bacteriol | 10.1128/jb.180.11.3007-3012.1998 | 1998 | ||
| Genetics | Microbial diversity and metabolic networks in acid mine drainage habitats. | Mendez-Garcia C, Pelaez AI, Mesa V, Sanchez J, Golyshina OV, Ferrer M. | Front Microbiol | 10.3389/fmicb.2015.00475 | 2015 | |
| Direct 5S rRNA Assay for Monitoring Mixed-Culture Bioprocesses. | Stoner DL, Browning CK, Bulmer DK, Ward TE, Macdonell MT. | Appl Environ Microbiol | 10.1128/aem.62.6.1969-1976.1996 | 1996 | ||
| Enzymology | Detection of Acidithiobacillus ferrooxidans in acid mine drainage environments using fluorescent in situ hybridization (FISH). | Mahmoud KK, Leduc LG, Ferroni GD | J Microbiol Methods | 10.1016/j.mimet.2004.10.022 | 2005 | |
| Sticky Bacteria: Understanding the Behavior of a D-Galactose Adapted Consortium of Acidophilic Chemolithotroph Bacteria and Their Attachment on a Concentrate of Polymetallic Mineral. | Aguirre P, Saavedra A, Moncayo E, Hedrich S, Guerrero K, Gentina JC | Front Microbiol | 10.3389/fmicb.2021.767639 | 2021 | ||
| Bioaugmentation with Acidithiobacillus species accelerates mineral weathering and formation of secondary mineral cements for hardpan development in sulfidic Pb-Zn tailings. | Liu Y, Wu S, Southam G, Chan TS, Lu YR, Paterson DJ, Huang L | J Hazard Mater | 10.1016/j.jhazmat.2020.124988 | 2021 | ||
| Metabolism | New Insights Into Acidithiobacillus thiooxidans Sulfur Metabolism Through Coupled Gene Expression, Solution Chemistry, Microscopy, and Spectroscopy Analyses. | Camacho D, Frazao R, Fouillen A, Nanci A, Lang BF, Apte SC, Baron C, Warren LA | Front Microbiol | 10.3389/fmicb.2020.00411 | 2020 | |
| Genetics | A new genome of Acidithiobacillus thiooxidans provides insights into adaptation to a bioleaching environment. | Travisany D, Cortes MP, Latorre M, Di Genova A, Budinich M, Bobadilla-Fazzini RA, Parada P, Gonzalez M, Maass A | Res Microbiol | 10.1016/j.resmic.2014.08.004 | 2014 | |
| Enzymology | A versatile and efficient markerless gene disruption system for Acidithiobacillus thiooxidans: application for characterizing a copper tolerance related multicopper oxidase gene. | Wen Q, Liu X, Wang H, Lin J | Environ Microbiol | 10.1111/1462-2920.12494 | 2014 | |
| Genetics | Draft genome sequence of the extremely acidophilic biomining bacterium Acidithiobacillus thiooxidans ATCC 19377 provides insights into the evolution of the Acidithiobacillus genus. | Valdes J, Ossandon F, Quatrini R, Dopson M, Holmes DS | J Bacteriol | 10.1128/JB.06281-11 | 2011 | |
| Phylogeny | Differentiation of Acidithiobacillus ferrooxidans and A. thiooxidans strains based on 16S-23S rDNA spacer polymorphism analysis. | Bergamo RF, Novo MT, Verissimo RV, Paulino LC, Stoppe NC, Sato MI, Manfio GP, Prado PI, Garcia O Jr, Ottoboni LM | Res Microbiol | 10.1016/j.resmic.2004.03.009 | 2004 | |
| Phylogeny | Physiology and taxonomy of thiobacillus strain TJ330, which oxidizes carbon disulphide (CS2). | Hartikainen T, Ruuskanen J, Raty K, Von Wright A, Martikainen PJ | J Appl Microbiol | 10.1046/j.1365-2672.2000.01150.x | 2000 | |
| Metabolism | Organic layer characteristics and microbial utilization of the biosulfur globules produced by haloalkaliphilic Thioalkalivibrio versutus D301 during biological desulfurization. | Liu Z, Yang M, Mu T, Liu J, Chen L, Miao D, Xing J | Extremophiles | 10.1007/s00792-022-01274-z | 2022 |
| #5601 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14887 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #35699 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123524 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104597 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive125.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data