Name: Neobacillus pocheonensis DSM 18135
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1249

Type strain:

Species: Neobacillus pocheonensis

Culture col. no.: DSM 18135, KCTC 13943, Gsoil 420

Strain history: <- ST Lee, KAIST

NCBI tax ID(s): 363869 (species)

SI-ID 403948

DSM 18135

Special Collections

DSMZ
KCTC

Section

Neobacillus pocheonensis DSM 18135 is an aerobe, spore-forming, rod-shaped bacterium that was isolated from soil, ginseng field.

rod-shaped
spore-forming
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Neobacillus*
	Species	**Neobacillus pocheonensis**
	Full Scientific Name (LPSN)	Neobacillus pocheonensis (Ten et al. 2007) Gupta et al. 2020

Synonym

Bacillus pocheonensis

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	positive

[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #67771]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7403]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #7403]

Culture medium growth

[Ref.: #7403]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7403]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7403]			growth	30 °C
[Ref.: #67771]			growth	25 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67771]

Oxygen tolerance

aerobe

[Ref.: #67771]	Type of spore	endospore
[Ref.: #67771]	Ability of spore formation	yes
[Ref.: #69480]	Ability of spore formation	yes Confidence in %92.391

[Ref.: #67771]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7403]	Sample type/isolated from	soil, ginseng field
[Ref.: #7403]	Country	Republic of Korea
[Ref.: #7403]	Country ISO 3 Code	KOR
[Ref.: #7403]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From soil of the ginseng field
[Ref.: #67771]	Geographic location (country and/or sea, region)	Pocheon Province
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Agriculture	#Field
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7403]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7403]	Bacillus pocheonensis gene for 16S rRNA, partial sequence, strain: Gsoil 420	AB245377	1495	GenBank ENA	363869 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Neobacillus pocheonensis KCTC 13943	GCA_023702235	contig	GenBank ENA	363869 tax ID	*

[Ref.: #7403]

GC-content

44.9 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Neobacillus pocheonensis KCTC 13943 NCBI: GCA_023702235.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	72.146	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	90.719	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	66.977	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.391	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	91.643	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	62.696	yes

Availability in culture collections External links

[Ref.: #7403]

Culture collection no.

DSM 18135, KCTC 13943, Gsoil 420

[Ref.: #70905]

SI-ID 403948

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Bacillus mesophilus sp. nov., an alginate-degrading bacterium isolated from a soil sample collected from an abandoned marine solar saltern.	Zhou YX, Liu GH, Liu B, Chen GJ, Du ZJ	Antonie Van Leeuwenhoek	10.1007/s10482-016-0692-7	2016	*
Phylogeny	Bacillus ginsengisoli sp. nov., isolated from soil of a ginseng field.	Nguyen NL, Kim YJ, Hoang VA, Min JW, Liang ZQ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.031740-0	2012	*
Phylogeny	Bacillus pocheonensis sp. nov., a moderately halotolerant, aerobic bacterium isolated from soil of a ginseng field.	Ten LN, Baek SH, Im WT, Larina LL, Lee JS, Oh HM, Lee ST	Int J Syst Evol Microbiol	10.1099/ijs.0.64491-0	2007	*

References

#7403

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18135

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#70905

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID403948.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Neobacillus pocheonensis in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Neobacillus pocheonensis KCTC 13943

Change proposal

Change proposal