Neobacillus pocheonensis (DSM 18135, KCTC 13943, Gsoil 420)

Name: Neobacillus pocheonensis (DSM 18135, KCTC 13943, Gsoil 420)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1249

Type strain

Culture col. no. DSM 18135 KCTC 13943 Gsoil 420

NCBI tax ID(s) 363869

Special Collections DSMZ KCTC

History DSMZ <- Sung-Taik Lee <- Wan-Taek Im, Gsoil 420 KCTC <- ST Lee, KAIST

Links

Neobacillus pocheonensis DSM 18135 is an aerobe, spore-forming, rod-shaped bacterium that was isolated from soil, ginseng field.

spore-forming rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 403948

KCTC 13943,DSM 18135

@ref 20215

Last LPSN update 2026-05-29 08:25:13

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Cytobacillaceae

Genus Neobacillus

Species Neobacillus pocheonensis

Full scientific name Neobacillus pocheonensis (Ten et al. 2007) Gupta et al. 2020

Synonyms (1)

Bacillus pocheonensis

Morphology

Cell morphology

@ref	Cell shape	Motility	Gram stain
67771	rod-shaped
67771			positive

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7403	R2A MEDIUM (DSMZ Medium 830)		Medium recipe at MediaDive	Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7403	positive	growth	30
67771	positive	growth	25

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
67771	aerobe
125439	obligate aerobe	97.443

Spore formation

@ref	Type of spore	Confidence
67771	endospore
125438		92.391
125439		91.903

Observation

67771

Observationquinones: MK-7

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Field
#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
7403	soil, ginseng field		Republic of Korea	KOR	Asia
67771	From soil of the ginseng field	Pocheon Province	Republic of Korea	KOR	Asia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7403	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2370223v1 assembly for Neobacillus pocheonensis KCTC 13943	contig	GCA_023702235	363869.3	8117747685	363869	35.65

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7403	Bacillus pocheonensis gene for 16S rRNA, partial sequence, strain: Gsoil 420	AB245377	1495		363869

GC content

7403

GC-content (mol%)44.9

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2370223v1 assembly for Neobacillus pocheonensis KCTC 13943
NCBI: GCA_023702235

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	97.44	no
125439	gram_stain	BacteriaNetⓘ	variable	58.05	no
125439	motility	BacteriaNetⓘ	yes	76.08	no
125439	spore_formation	BacteriaNetⓘ	yes	91.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Neobacillus pocheonensis KCTC 13943
NCBI: GCA_023702235.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	72.15	yes
125438	anaerobic	anaerobicⓘ	no	90.72	yes
125438	aerobic	aerobicⓘ	yes	66.98	yes
125438	spore-forming	spore-formingⓘ	yes	92.39	yes
125438	thermophilic	thermophileⓘ	no	91.64	yes
125438	flagellated	motile2+ⓘ	no	62.70	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
	Deep eutectic solvent assisted recovery of high molecular weight levan from an isolated Neobacillus pocheonensis BPSCM4.	Keerthashalini P, Sobanadevi V, Uppuluri KB.	Prep Biochem Biotechnol	10.1080/10826068.2023.2245877	2024
Phylogeny	Neobacillus driksii sp. nov. isolated from a Mars 2020 spacecraft assembly facility and genomic potential for lasso peptide production in Neobacillus.	Hameed A, McDonagh F, Sengupta P, Miliotis G, Sivabalan SKM, Szydlowski L, Simpson A, Singh NK, Rekha PD, Raman K, Venkateswaran K.	Microbiol Spectr	10.1128/spectrum.01376-24	2025
Metabolism	Bacillus mesophilus sp. nov., an alginate-degrading bacterium isolated from a soil sample collected from an abandoned marine solar saltern.	Zhou YX, Liu GH, Liu B, Chen GJ, Du ZJ	Antonie Van Leeuwenhoek	10.1007/s10482-016-0692-7	2016
Phylogeny	Bacillus ginsengisoli sp. nov., isolated from soil of a ginseng field.	Nguyen NL, Kim YJ, Hoang VA, Min JW, Liang ZQ, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.031740-0	2012
Phylogeny	Bacillus pocheonensis sp. nov., a moderately halotolerant, aerobic bacterium isolated from soil of a ginseng field.	Ten LN, Baek SH, Im WT, Larina LL, Lee JS, Oh HM, Lee ST	Int J Syst Evol Microbiol	10.1099/ijs.0.64491-0	2007

References

#7403	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18135
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Neobacillus pocheonensis (DSM 18135, KCTC 13943, Gsoil 420)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_023702235

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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