Name: Lederbergia galactosidilytica MB800
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1212

Type strain:

Species: Lederbergia galactosidilytica

Strain Designation: MB800

Culture col. no.: DSM 15595, LMG 17892, CIP 108417

Strain history: CIP <- 2004, DSMZ <- 1997, P. de Vos, Ghent Univ., Ghent, Belgium <- 1997, M. Heyndrickx, APQCA Res., Ghent, Belgium: strain MB800

NCBI tax ID(s): 217031 (species)

SI-ID 10694

LMG 17892, DSM 15595, CIP 108417

Section

Lederbergia galactosidilytica MB800 is a facultative anaerobe, spore-forming, mesophilic bacterium that forms irregular colonies and was isolated from raw milk.

colony-forming
Gram-positive
motile
rod-shaped
spore-forming
facultative anaerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Lederbergia*
	Species	**Lederbergia galactosidilytica**
	Full Scientific Name (LPSN)	Lederbergia galactosidilytica corrig. (Heyndrickx et al. 2004) Gupta et al. 2020

	Synonym	Bacillus galactosidilyticus
	Synonym	Lederbergia galactosidilyticus

Information on morphological and physiological properties Morphology

[Ref.: #23311]	Gram stain	positive
[Ref.: #119504]	Gram stain	positive

[Ref.: #23311]	Cell length	2-5 µm

[Ref.: #23311]	Cell width	0.7-0.9 µm

[Ref.: #23311]	Cell shape	rod-shaped
[Ref.: #119504]	Cell shape	rod-shaped

[Ref.: #23311]	Motility	yes
[Ref.: #119504]	Motility	yes

[Ref.: #23311]	Colony size	1 mm
[Ref.: #23311]	Colony color	creamy, off-white, opaque
[Ref.: #23311]	Colony shape	irregular
[Ref.: #23311]	Incubation period	2 days
[Ref.: #23311]	Cultivation medium used	TSA

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5910]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #5910]

Culture medium growth

[Ref.: #5910]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5910]

Culture medium composition

expand / minimize

[Ref.: #23311]

Culture medium

Trypticase Soy Agar (TSA)

[Ref.: #23311]

Culture medium growth

[Ref.: #38177]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #38177]

Culture medium growth

[Ref.: #38177]

Culture medium composition

expand / minimize

[Ref.: #119504]

Culture medium

CIP Medium 72

[Ref.: #119504]

Culture medium growth

[Ref.: #119504]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #5910]		growth	30 °C
[Ref.: #23311]		growth	30 °C
[Ref.: #23311]		growth	40 °C
[Ref.: #23311]	no	growth	50 °C
[Ref.: #38177]		growth	30 °C
[Ref.: #119504]		growth	22-45 °C
[Ref.: #119504]	no	growth	10 °C
[Ref.: #119504]	no	growth	55 °C

[Ref.: #5910]	Temperature range	mesophilic
[Ref.: #23311]	Temperature range	mesophilic
[Ref.: #23311]	Temperature range	thermophilic
[Ref.: #38177]	Temperature range	mesophilic
[Ref.: #119504]	Temperature range	psychrophilic
[Ref.: #119504]	Temperature range	thermophilic

	Kind of pH		pH
[Ref.: #23311]		growth	6-10.5
[Ref.: #23311]	no	growth	<5
[Ref.: #119504]		growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23311]	Oxygen tolerance	facultative anaerobe
[Ref.: #119504]	Oxygen tolerance	obligate aerobe

[Ref.: #23311]	Spore description	ellipsoidal, central, paracentral, subterminal, slightly swollen sporangia
[Ref.: #23311]	Type of spore	endospore
[Ref.: #23311]	Ability of spore formation	yes
[Ref.: #119504]	Ability of spore formation	yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #119504]		NaCl		growth	0-8	%
[Ref.: #119504]		NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23311]	2-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23311]	5-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23311]	amygdalin ChEBI	+/-	builds acid from
[Ref.: #23311]	arbutin ChEBI	+	builds acid from
[Ref.: #23311]	casein	+/-	hydrolysis
[Ref.: #23311]	cellobiose ChEBI	+	builds acid from
[Ref.: #23311]	citrate ChEBI	-	assimilation
[Ref.: #119504]	citrate ChEBI	-	carbon source
[Ref.: #23311]	D-arabinose ChEBI	-	builds acid from
[Ref.: #23311]	D-arabitol ChEBI	-	builds acid from
[Ref.: #23311]	D-fructose ChEBI	+/-	builds acid from
[Ref.: #23311]	D-fucose ChEBI	-	builds acid from
[Ref.: #23311]	D-galactose ChEBI	+/-	builds acid from
[Ref.: #23311]	D-glucose ChEBI	+/-	builds acid from
[Ref.: #23311]	D-lyxose ChEBI	-	builds acid from
[Ref.: #23311]	D-mannitol ChEBI	+/-	builds acid from
[Ref.: #23311]	D-mannose ChEBI	+/-	builds acid from
[Ref.: #23311]	D-ribose ChEBI	+/-	builds acid from
[Ref.: #23311]	D-sorbitol ChEBI	-	builds acid from
[Ref.: #23311]	D-tagatose ChEBI	-	builds acid from
[Ref.: #23311]	D-trehalose ChEBI	+	builds acid from
[Ref.: #23311]	D-xylose ChEBI	+/-	builds acid from
[Ref.: #23311]	erythritol ChEBI	-	builds acid from
[Ref.: #23311]	esculin ChEBI	+	hydrolysis
[Ref.: #119504]	esculin ChEBI	+	hydrolysis
[Ref.: #23311]	galactitol ChEBI	-	builds acid from
[Ref.: #23311]	gelatin ChEBI	-	hydrolysis
[Ref.: #23311]	gentiobiose ChEBI	+/-	builds acid from
[Ref.: #23311]	gluconate ChEBI	-	builds acid from
[Ref.: #23311]	glycerol ChEBI	-	builds acid from
[Ref.: #23311]	glycogen ChEBI	-	builds acid from
[Ref.: #119504]	hippurate ChEBI	+	hydrolysis
[Ref.: #23311]	inulin ChEBI	+/-	builds acid from
[Ref.: #23311]	L-arabinose ChEBI	+/-	builds acid from
[Ref.: #23311]	L-arabitol ChEBI	-	builds acid from
[Ref.: #23311]	L-arginine ChEBI	-	assimilation
[Ref.: #23311]	L-fucose ChEBI	-	builds acid from
[Ref.: #23311]	L-lysine ChEBI	-	assimilation
[Ref.: #23311]	L-ornithine ChEBI	-	assimilation
[Ref.: #23311]	L-rhamnose ChEBI	+/-	builds acid from
[Ref.: #23311]	L-sorbose ChEBI	-	builds acid from
[Ref.: #23311]	L-xylose ChEBI	-	builds acid from
[Ref.: #23311]	lactose ChEBI	+/-	builds acid from
[Ref.: #23311]	maltose ChEBI	+/-	builds acid from
[Ref.: #23311]	melezitose ChEBI	+	builds acid from
[Ref.: #23311]	melibiose ChEBI	+	builds acid from
[Ref.: #23311]	methyl alpha-D-glucopyranoside ChEBI	+/-	builds acid from
[Ref.: #23311]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #23311]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from
[Ref.: #23311]	myo-inositol ChEBI	-	builds acid from
[Ref.: #23311]	N-acetylglucosamine ChEBI	+/-	builds acid from
[Ref.: #23311]	nitrate ChEBI	+	reduction
[Ref.: #119504]	nitrate ChEBI	+	reduction
[Ref.: #119504]	nitrate ChEBI	-	respiration
[Ref.: #119504]	nitrite ChEBI	-	reduction
[Ref.: #23311]	O-nitrophenyl-beta-D-galactopyranosid ChEBI	+	assimilation
[Ref.: #23311]	raffinose ChEBI	+	builds acid from
[Ref.: #23311]	ribitol ChEBI	-	builds acid from
[Ref.: #23311]	salicin ChEBI	+/-	builds acid from
[Ref.: #23311]	starch ChEBI	+	builds acid from
[Ref.: #23311]	sucrose ChEBI	+	builds acid from
[Ref.: #23311]	tryptophan ChEBI	-	energy source
[Ref.: #23311]	turanose ChEBI	+/-	builds acid from
[Ref.: #23311]	urea ChEBI	-	hydrolysis
[Ref.: #23311]	xylitol ChEBI	-	builds acid from
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #23311]	acetoin ChEBI	no
[Ref.: #23311]	hydrogen sulfide ChEBI	no
[Ref.: #23311]	indole ChEBI	no
[Ref.: #119504]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #23311]	acetoin ChEBI	-
[Ref.: #119504]	acetoin ChEBI	-
[Ref.: #119504]	glucose ChEBI		-
[Ref.: #23311]	indole ChEBI			-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #119504]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119504]	amylase	-
[Ref.: #119504]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #119504]	caseinase	+	3.4.21.50
[Ref.: #23311]	catalase	+	1.11.1.6
[Ref.: #119504]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #119504]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #119504]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #119504]	gelatinase	-
[Ref.: #119504]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #119504]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #119504]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #119504]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #119504]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #23311]	tryptophan deaminase	-	4.1.99.1
[Ref.: #119504]	tween esterase	-
[Ref.: #23311]	urease	+/-	3.5.1.5
[Ref.: #23311]	urease	-	3.5.1.5
[Ref.: #119504]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #119504]	2742	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119504]	11168	-	-	+	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	cellulose degradation	100	5 of 5
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	lipoate biosynthesis	100	5 of 5
[Ref.: #66794]	vitamin K metabolism	100	5 of 5
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	starch degradation	100	10 of 10
[Ref.: #66794]	teichoic acid biosynthesis	100	1 of 1
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	tetrahydrofolate metabolism	100	14 of 14
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	aspartate and asparagine metabolism	100	9 of 9
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	photosynthesis	92.86	13 of 14
[Ref.: #66794]	vitamin B1 metabolism	92.31	12 of 13
[Ref.: #66794]	pentose phosphate pathway	90.91	10 of 11
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	Entner Doudoroff pathway	90	9 of 10
[Ref.: #66794]	valine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	degradation of sugar alcohols	87.5	14 of 16
[Ref.: #66794]	ketogluconate metabolism	87.5	7 of 8
[Ref.: #66794]	peptidoglycan biosynthesis	86.67	13 of 15
[Ref.: #66794]	pyrimidine metabolism	84.44	38 of 45
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	80	4 of 5
[Ref.: #66794]	purine metabolism	78.72	74 of 94
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	NAD metabolism	77.78	14 of 18
[Ref.: #66794]	degradation of sugar acids	76	19 of 25
[Ref.: #66794]	dTDPLrhamnose biosynthesis	75	6 of 8
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	C4 and CAM-carbon fixation	75	6 of 8
[Ref.: #66794]	ppGpp biosynthesis	75	3 of 4
[Ref.: #66794]	gluconeogenesis	75	6 of 8
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	glycolysis	70.59	12 of 17
[Ref.: #66794]	phenylalanine metabolism	69.23	9 of 13
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	d-mannose degradation	66.67	6 of 9
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	selenocysteine biosynthesis	66.67	4 of 6
[Ref.: #66794]	degradation of hexoses	66.67	12 of 18
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	serine metabolism	66.67	6 of 9
[Ref.: #66794]	methionine metabolism	65.38	17 of 26
[Ref.: #66794]	glutamate and glutamine metabolism	64.29	18 of 28
[Ref.: #66794]	metabolism of disaccharids	63.64	7 of 11
[Ref.: #66794]	cholesterol biosynthesis	63.64	7 of 11
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	arginine metabolism	62.5	15 of 24
[Ref.: #66794]	alanine metabolism	62.07	18 of 29
[Ref.: #66794]	leucine metabolism	61.54	8 of 13
[Ref.: #66794]	urea cycle	61.54	8 of 13
[Ref.: #66794]	oxidative phosphorylation	61.54	56 of 91
[Ref.: #66794]	degradation of pentoses	60.71	17 of 28
[Ref.: #66794]	glycine betaine biosynthesis	60	3 of 5
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	histidine metabolism	58.62	17 of 29
[Ref.: #66794]	lipid metabolism	58.06	18 of 31
[Ref.: #66794]	non-pathway related	57.89	22 of 38
[Ref.: #66794]	isoprenoid biosynthesis	57.69	15 of 26
[Ref.: #66794]	citric acid cycle	57.14	8 of 14
[Ref.: #66794]	lipid A biosynthesis	55.56	5 of 9
[Ref.: #66794]	tryptophan metabolism	52.63	20 of 38
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	50	6 of 12
[Ref.: #66794]	suberin monomers biosynthesis	50	1 of 2
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	CMP-KDO biosynthesis	50	2 of 4
[Ref.: #66794]	androgen and estrogen metabolism	50	8 of 16
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	cysteine metabolism	50	9 of 18
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	biotin biosynthesis	50	2 of 4
[Ref.: #66794]	lactate fermentation	50	2 of 4
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	sulfate reduction	46.15	6 of 13
[Ref.: #66794]	phenylpropanoid biosynthesis	46.15	6 of 13
[Ref.: #66794]	proline metabolism	45.45	5 of 11
[Ref.: #66794]	vitamin B6 metabolism	45.45	5 of 11
[Ref.: #66794]	4-hydroxymandelate degradation	44.44	4 of 9
[Ref.: #66794]	ubiquinone biosynthesis	42.86	3 of 7
[Ref.: #66794]	glutathione metabolism	42.86	6 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	42.86	3 of 7
[Ref.: #66794]	mevalonate metabolism	42.86	3 of 7
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	41.18	7 of 17
[Ref.: #66794]	ascorbate metabolism	40.91	9 of 22
[Ref.: #66794]	lysine metabolism	40.48	17 of 42
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	glycine metabolism	40	4 of 10
[Ref.: #66794]	myo-inositol biosynthesis	40	4 of 10
[Ref.: #66794]	propionate fermentation	40	4 of 10
[Ref.: #66794]	hydrogen production	40	2 of 5
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	38.46	5 of 13
[Ref.: #66794]	phenol degradation	35	7 of 20
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	polyamine pathway	30.43	7 of 23
[Ref.: #66794]	coenzyme M biosynthesis	30	3 of 10
[Ref.: #66794]	4-hydroxyphenylacetate degradation	30	3 of 10
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	aclacinomycin biosynthesis	28.57	2 of 7
[Ref.: #66794]	tyrosine metabolism	28.57	4 of 14
[Ref.: #66794]	arachidonic acid metabolism	27.78	5 of 18
[Ref.: #66794]	ginsenoside metabolism	25	4 of 16
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	vitamin B12 metabolism	23.53	8 of 34
[Ref.: #66794]	nitrate assimilation	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5910]	Sample type/isolated from	raw milk
[Ref.: #5910]	Country	Belgium
[Ref.: #5910]	Country ISO 3 Code	BEL
[Ref.: #5910]	Continent	Europe

[Ref.: #23311]	Sample type/isolated from	aerobic sporeforming flora of raw milk

[Ref.: #119504]	Sample type/isolated from	Food, Raw milk after heat-treatement
* marker position based on {}

Isolation sources categories

#Engineered	#Food production	#Dairy product
#Environmental	#Microbial community	-
#Host Body Product	#Fluids	#Milk

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ535638 (>99% sequence identity) for Lederbergia galactosidilyticus subclade from Microbeatlas

Aquatic Samples	93
Soil Samples	412
Animal Samples	390
Plant Samples	82
Total Samples	977

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5910]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119504]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5910]	Bacillus galactosidilyticus partial 16S rRNA gene, type strain LMG 17892T	AJ535638	1486	ENA	217031 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Lederbergia galactosidilytica DSM 15595	GCA_017873565	contig	GenBank	217031 tax ID	*
[Ref.: #66792]	Lederbergia galactosidilyticus strain DSM 15595	217031.9	wgs	PATRIC	217031 tax ID	*
[Ref.: #66792]	Bacillus galactosidilyticus DSM 15595	2913365302	draft	JGI IMG/M	217031 tax ID	*

[Ref.: #5910]	GC-content	37.7 mol%
[Ref.: #23311]	GC-content	37.7 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lederbergia galactosidilyticus strain DSM 15595 PATRIC: 217031.9
[Ref.: #69480]	motile	yes	87.256	no
[Ref.: #69480]	gram-positive	yes	87.088	no
[Ref.: #69480]	anaerobic	no	98.607	yes
[Ref.: #69480]	aerobic	yes	75.317	yes
[Ref.: #69480]	halophile	yes	75.181	no
[Ref.: #69480]	spore-forming	yes	95.337	yes
[Ref.: #69480]	glucose-util	yes	88.133	no
[Ref.: #69480]	thermophile	no	99.361	no
[Ref.: #69480]	flagellated	yes	82.07	no
[Ref.: #69480]	glucose-ferment	no	84.124	no

Availability in culture collections External links

[Ref.: #5910]

Culture collection no.

DSM 15595, LMG 17892, CIP 108417

[Ref.: #70868]

SI-ID 10694

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus wuyishanensis sp. nov., isolated from rhizosphere soil of a medical plant, Prunella vulgaris.	Liu B, Liu GH, Sengonca C, Schumann P, Che JM, Zhu YJ, Wang JP	Int J Syst Evol Microbiol	10.1099/ijs.0.000215	2015	*
Phylogeny	Bacillus graminis sp. nov., an endophyte isolated from a coastal dune plant.	Bibi F, Chung EJ, Jeon CO, Chung YR	Int J Syst Evol Microbiol	10.1099/ijs.0.023820-0	2010	*
Phylogeny	Bacillus galactosidilyticus sp. nov., an alkali-tolerant beta-galactosidase producer.	Heyndrickx M, Logan NA, Lebbe L, Rodriguez-Diaz M, Forsyth G, Goris J, Scheldeman P, De Vos P	Int J Syst Evol Microbiol	10.1099/ijs.0.02816-0	2004	*

References

#5910

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15595

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23311

Marc Heyndrickx, Niall A. Logan, Liesbeth Lebbe, Marina Rodríguez-Díaz, Gillian Forsyth, Johan Goris, Patsy Scheldeman, Paul De Vos: Bacillus galactosidilyticus sp. nov., an alkali-tolerant beta-galactosidase producer. IJSEM 54: 617 - 621 2004 ( DOI 10.1099/ijs.0.02816-0 , PubMed 15023985 )

#38177 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#70868

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID10694.1 )

#119504 Collection of Institut Pasteur ; Curators of the CIP; CIP 108417
* These data were automatically processed and therefore are not curated

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Lederbergia galactosidilyticus strain DSM 15595

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