Name: Priestia endophytica 2DT
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1203

Type strain:

Species: Priestia endophytica

Strain Designation: 2DT

Culture col. no.: DSM 13796, JCM 12211, CIP 106778, KCTC 13922, UCM B-5715

Strain history: CIP <- 2000, F. G. Priest, Heriot-Watt Univ. Edinburgh, UK: strain 2DT <- 1989, O. Reva

NCBI tax ID(s): 1121089 (strain), 135735 (species)

SI-ID 49526

DSM 13796, NCIMB 13749, CIP 106778, KCTC 13922, LMG 21715, JCM 12211, KACC 10901, NCIMB 14066

Special Collections

Other strains from Priestia endophytica

Section

Priestia endophytica 2DT is an obligate aerobe, spore-forming, Gram-positive bacterium that forms circular colonies and was isolated from inner tissues of plants of healthy cotton plants .

colony-forming
Gram-positive
rod-shaped
spore-forming
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Priestia*
	Species	**Priestia endophytica**
	Full Scientific Name (LPSN)	Priestia endophytica (Reva et al. 2002) Gupta et al. 2020

Synonym

Bacillus endophyticus

Information on morphological and physiological properties Morphology

[Ref.: #23307]	Gram stain	positive
[Ref.: #119029]	Gram stain	positive

[Ref.: #23307]	Cell length	2.5-3.5 µm

[Ref.: #23307]	Cell width	0.5-1.5 µm

[Ref.: #23307]	Cell shape	rod-shaped
[Ref.: #119029]	Cell shape	rod-shaped

[Ref.: #23307]	Motility	no
[Ref.: #119029]	Motility	no

[Ref.: #23307]	Colony size	1-3 mm
[Ref.: #23307]	Colony color	red, pink or white
[Ref.: #23307]	Colony shape	circular
[Ref.: #23307]	Cultivation medium used	nutrient agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5167]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #5167]

Culture medium growth

[Ref.: #5167]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5167]

Culture medium composition

expand / minimize

[Ref.: #23307]

Culture medium

Nutrient agar (NA)

[Ref.: #23307]

Culture medium growth

[Ref.: #38648]

Culture medium

MEDIUM 29- Brain heart agar

[Ref.: #38648]

Culture medium growth

[Ref.: #38648]

Culture medium composition

expand / minimize

[Ref.: #119029]

Culture medium

CIP Medium 29

[Ref.: #119029]

Culture medium growth

[Ref.: #119029]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #5167]	growth	30 °C
[Ref.: #23307]	growth	10-45 °C
[Ref.: #23307]	optimum	28 °C
[Ref.: #38648]	growth	30 °C
[Ref.: #67770]	growth	30 °C
[Ref.: #119029]	growth	10-45 °C

	pH	Kind of pH		pH
[Ref.: #119029]			growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23307]	Oxygen tolerance	obligate aerobe
[Ref.: #119029]	Oxygen tolerance	obligate aerobe

[Ref.: #23307]	Spore description	ellipsoidal, subterminally or terminally in a non-swollen sporangium
[Ref.: #23307]	Type of spore	endospore
[Ref.: #23307]	Ability of spore formation	yes
[Ref.: #119029]	Ability of spore formation	yes
[Ref.: #69480]	Ability of spore formation	yes Confidence in %90.422
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

	Salt		Salt conc.
[Ref.: #23307]	NaCl	growth	10	%
[Ref.: #23307]	NaCl	growth	5	%
[Ref.: #119029]	NaCl	growth	0-10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23307]	acetate ChEBI	-	assimilation
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	casein	-	hydrolysis
[Ref.: #68371]	cellobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	citrate ChEBI	+	assimilation
[Ref.: #119029]	citrate ChEBI	-	carbon source
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	D-glucose ChEBI	+	builds acid from
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	D-mannitol ChEBI	+	builds acid from
[Ref.: #68371]	D-mannitol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	D-mannose ChEBI	+	builds acid from
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	D-rhamnose ChEBI	+	builds acid from
[Ref.: #68371]	D-ribose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	D-xylose ChEBI	+/-	builds acid from
[Ref.: #68371]	D-xylose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	egg yolk	-	assimilation
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #119029]	esculin ChEBI	+	hydrolysis
[Ref.: #68371]	esculin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	galactose ChEBI	-	builds acid from
[Ref.: #23307]	gelatin ChEBI	-	hydrolysis
[Ref.: #68371]	gentiobiose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	gluconate ChEBI	+	assimilation
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	glucose ChEBI	-	builds gas from
[Ref.: #23307]	glycerol ChEBI	-	builds acid from
[Ref.: #68371]	glycerol ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	glycogen ChEBI	-	builds acid from
[Ref.: #68371]	glycogen ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #119029]	hippurate ChEBI	-	hydrolysis
[Ref.: #23307]	L-arabinose ChEBI	+	builds acid from
[Ref.: #68371]	L-arabinose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	lactose ChEBI	-	builds acid from
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	melezitose ChEBI	-	builds acid from
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	melibiose ChEBI	+	builds acid from
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	methyl D-glucoside ChEBI	-	builds acid from
[Ref.: #23307]	myo-inositol ChEBI	+	builds acid from
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	nitrate ChEBI	-	reduction
[Ref.: #119029]	nitrate ChEBI	-	reduction
[Ref.: #119029]	nitrate ChEBI	-	respiration
[Ref.: #119029]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	propionate ChEBI	-	assimilation
[Ref.: #23307]	raffinose ChEBI	+/-	builds acid from
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	ribitol ChEBI	-	builds acid from
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23307]	ribose ChEBI	+	builds acid from
[Ref.: #68371]	salicin ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	starch ChEBI	-	hydrolysis
[Ref.: #68371]	starch ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #23307]	sucrose ChEBI	+	builds acid from
[Ref.: #23307]	tartrate ChEBI	-	assimilation
[Ref.: #23307]	trehalose ChEBI	-	builds acid from
[Ref.: #23307]	tryptophan ChEBI	-	energy source
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic resistance	Concentration
[Ref.: #23307]		ampicillin ChEBI	yes	100	µg

	Metabolite	Production
[Ref.: #23307]	acetoin ChEBI	no
[Ref.: #23307]	indole ChEBI	no
[Ref.: #119029]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #23307]	acetoin ChEBI	-
[Ref.: #119029]	acetoin ChEBI	-
[Ref.: #119029]	glucose ChEBI		-
[Ref.: #23307]	indole ChEBI			-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #119029]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #119029]	amylase	-
[Ref.: #23307]	arginine dihydrolase	-	3.5.3.6
[Ref.: #23307]	beta-galactosidase	+	3.2.1.23
[Ref.: #119029]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #119029]	caseinase	-	3.4.21.50
[Ref.: #23307]	catalase	+	1.11.1.6
[Ref.: #119029]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #23307]	cytochrome oxidase	+	1.9.3.1
[Ref.: #119029]	DNase	-
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #119029]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #119029]	gelatinase	-
[Ref.: #119029]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #119029]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #119029]	oxidase	+
[Ref.: #23307]	phenylalanine deaminase	-	4.3.1.5
[Ref.: #119029]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #23307]	tryptophan deaminase	-	4.1.99.1
[Ref.: #119029]	tryptophan deaminase	-
[Ref.: #119029]	tween esterase	+
[Ref.: #23307]	urease	-	3.5.1.5
[Ref.: #119029]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #119029]	10717	not determinedn.d.	+	-	-	+	+	+	-	-	-	+/-	+	+	-	-	+	-	-	+	+	-	+/-	+	-	+	+	+	+	+	-	-	+/-	+/-	+/-	-	-	+	+	-	+	-	-	-	-	-	-	-	-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #119029]	1831	not determinedn.d.	+	+	-	+	+	-	+	+	-	+	+	+	+	-	-	+	+	+	+	+	+	+	+	+	-	+	-	-	-	-	-	+	+	+	+	-	+	-	-	-	-	+	-	+	-	-	-	+	+	+	+	+	-	+	+	+	+	-	-	+	+	+	-	-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	+	+	+	-	+	-	+	-	+	-	+	+	+	+	+	+	+	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #119029]	9800	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23307]	Sample type/isolated from	inner tissues of plants of healthy cotton plants (Gossypium sp.)
[Ref.: #23307]	Geographic location (country and/or sea, region)	Dushanbe
[Ref.: #23307]	Country	Tajikistan
[Ref.: #23307]	Country ISO 3 Code	TJK
[Ref.: #23307]	Continent	Asia

[Ref.: #5167]	Sample type/isolated from	inner tissues of cotton plants
[Ref.: #5167]	Geographic location (country and/or sea, region)	Dushanbe
[Ref.: #5167]	Country	Tajikistan
[Ref.: #5167]	Country ISO 3 Code	TJK
[Ref.: #5167]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Inner tissues of healthy cotton plants (Gossypium sp.)
[Ref.: #67770]	Host species	Gossypium sp.
[Ref.: #67770]	Geographic location (country and/or sea, region)	Dushanbe
[Ref.: #67770]	Country	Tajikistan
[Ref.: #67770]	Country ISO 3 Code	TJK
[Ref.: #67770]	Continent	Asia

[Ref.: #119029]	Sample type/isolated from	Plant, Inner tissues of cotton plants
[Ref.: #119029]	Country	Tajikistan
[Ref.: #119029]	Country ISO 3 Code	TJK
[Ref.: #119029]	Continent	Asia
[Ref.: #119029]	Isolation date	1989
* marker position based on {}

Isolation sources categories

#Host

#Plants

#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AF295302 (>99% sequence identity) for Priestia endophytica from Microbeatlas

Aquatic Samples	2200
Soil Samples	5640
Animal Samples	4743
Plant Samples	1546
Total Samples	14129

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5167]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #119029]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23307]	Bacillus endophyticus 16S ribosomal RNA gene, partial sequence	AF295302	1470	GenBank ENA	135735 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Priestia endophytica DSM 13796	GCA_900115845	scaffold	GenBank ENA	1121089 tax ID
[Ref.: #67770]	Priestia endophytica KCTC 13922	GCA_001590825	scaffold	GenBank ENA	135735 tax ID
[Ref.: #66792]	Bacillus endophyticus DSM 13796	1121089.3	wgs	PATRIC	1121089 tax ID	*
[Ref.: #66792]	Bacillus endophyticus strain KCTC 13922	135735.7	wgs	PATRIC	135735 tax ID	*
[Ref.: #66792]	Bacillus endophyticus DSM 13796	2599185264	draft	JGI IMG/M	1121089 tax ID	*
[Ref.: #66792]	Bacillus endophyticus KCTC 13922	2724679200	draft	JGI IMG/M	135735 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Bacillus endophyticus strain KCTC 13922 PATRIC: 135735.6
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Bacillus endophyticus DSM 13796 PATRIC: 1121089.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	79.9	yes
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	98.654	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	90.422	yes
[Ref.: #69480]	aerobic	aerobicⓘ	yes	75.017	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	91.711	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	78.598	no

Availability in culture collections External links

[Ref.: #5167]

Culture collection no.

DSM 13796, JCM 12211, CIP 106778, KCTC 13922, UCM B-5715

[Ref.: #70859]

SI-ID 49526

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus filamentosus sp. nov., isolated from sediment sample.	Sonalkar VV, Mawlankar R, Venkata Ramana V, Joseph N, Shouche YS, Dastager SG	Antonie Van Leeuwenhoek	10.1007/s10482-014-0341-y	2014	*
Phylogeny	Bacillus endophyticus sp. nov., isolated from the inner tissues of cotton plants (Gossypium sp.).	Reva ON, Smirnov VV, Pettersson B, Priest FG	Int J Syst Evol Microbiol	10.1099/00207713-52-1-101	2002	*

References

#5167

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13796

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23307

Oleg N Reva, Valerie V Smirnov, Bertil Pettersson, Fergus G Priest: Bacillus endophyticus sp. nov., isolated from the inner tissues of cotton plants (Gossypium sp.).. IJSEM 52: 101 - 107 2002 ( DOI 10.1099/00207713-52-1-101 , PubMed 11837291 )

#38648 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#70859

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49526.1 )

#119029 Collection of Institut Pasteur ; Curators of the CIP; CIP 106778
* These data were automatically processed and therefore are not curated

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Bacillus endophyticus strain KCTC 13922

Bacillus endophyticus DSM 13796

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