Pasteurella canis 182 is a microaerophile bacterium that was isolated from healthy dog throat.
microaerophile genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Gammaproteobacteria |
| Order Pasteurellales |
| Family Pasteurellaceae |
| Genus Pasteurella |
| Species Pasteurella canis |
| Full scientific name Pasteurella canis Mutters et al. 1985 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 16564 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 16564 | BHI MEDIUM (DSMZ Medium 215) | Medium recipe at MediaDive | Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water | ||
| 40590 | MEDIUM 118 - for Pasteurella, Actinobacillus and Psychrobacter frigidicola | Distilled water make up to (1000.000 ml);Yeast extract (1.000 g);Tryptocasein soy agar (40.000 g) | |||
| 117141 | CIP Medium 118-b | Medium recipe at CIP |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 68374 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32E |
| 68374 | 17057 ChEBI | cellobiose | - | builds acid from | from API ID32E |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68374 | 18333 ChEBI | D-arabitol | - | builds acid from | from API ID32E |
| 68374 | 18024 ChEBI | D-galacturonic acid | - | builds acid from | from API ID32E |
| 68377 | 17634 ChEBI | D-glucose | + | builds acid from | from API NH |
| 68374 | 17634 ChEBI | D-glucose | - | builds acid from | from API ID32E |
| 68374 | 16899 ChEBI | D-mannitol | - | builds acid from | from API ID32E |
| 68381 | 16899 ChEBI | D-mannitol | - | builds acid from | from API rID32STR |
| 68381 | 16988 ChEBI | D-ribose | + | builds acid from | from API rID32STR |
| 68381 | 16443 ChEBI | D-tagatose | - | builds acid from | from API rID32STR |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68381 | 606565 ChEBI | hippurate | - | hydrolysis | from API rID32STR |
| 68374 | 30849 ChEBI | L-arabinose | - | builds acid from | from API ID32E |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68374 | 18403 ChEBI | L-arabitol | - | builds acid from | from API ID32E |
| 68374 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API ID32E |
| 68381 | 17716 ChEBI | lactose | - | builds acid from | from API rID32STR |
| 68374 | 25094 ChEBI | lysine | - | degradation | from API ID32E |
| 68374 | 15792 ChEBI | malonate | - | assimilation | from API ID32E |
| 68381 | 17306 ChEBI | maltose | - | builds acid from | from API rID32STR |
| 68374 | 17306 ChEBI | maltose | - | builds acid from | from API ID32E |
| 68381 | 6731 ChEBI | melezitose | - | builds acid from | from API rID32STR |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68374 | 17268 ChEBI | myo-inositol | - | builds acid from | from API ID32E |
| 68374 | 18257 ChEBI | ornithine | - | degradation | from API ID32E |
| 68374 | 18394 ChEBI | palatinose | - | builds acid from | from API ID32E |
| 68374 | Potassium 5-ketogluconate | - | builds acid from | from API ID32E | |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68374 | 15963 ChEBI | ribitol | - | builds acid from | from API ID32E |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68374 | 30911 ChEBI | sorbitol | - | builds acid from | from API ID32E |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68377 | 17992 ChEBI | sucrose | + | builds acid from | from API NH |
| 68374 | 17992 ChEBI | sucrose | - | builds acid from | from API ID32E |
| 68381 | 27082 ChEBI | trehalose | - | builds acid from | from API rID32STR |
| 68374 | 27082 ChEBI | trehalose | - | builds acid from | from API ID32E |
| 68374 | 27897 ChEBI | tryptophan | + | energy source | from API ID32E |
| 68377 | 27897 ChEBI | tryptophan | - | energy source | from API NH |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68377 | 16199 ChEBI | urea | - | hydrolysis | from API NH |
| 68374 | 16199 ChEBI | urea | - | hydrolysis | from API ID32E |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68381 | Alanyl-Phenylalanyl-Proline arylamidase | - | from API rID32STR | |
| 68381 | alkaline phosphatase | + | 3.1.3.1 | from API rID32STR |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68374 | alpha-galactosidase | - | 3.2.1.22 | from API ID32E |
| 68374 | alpha-glucosidase | - | 3.2.1.20 | from API ID32E |
| 68374 | alpha-maltosidase | - | from API ID32E | |
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 68374 | arginine dihydrolase | - | 3.5.3.6 | from API ID32E |
| 68377 | beta-galactosidase | - | 3.2.1.23 | from API NH |
| 68374 | beta-galactosidase | - | 3.2.1.23 | from API ID32E |
| 68381 | beta-galactosidase | - | 3.2.1.23 | from API rID32STR |
| 68381 | beta-glucosidase | - | 3.2.1.21 | from API rID32STR |
| 68374 | beta-glucosidase | - | 3.2.1.21 | from API ID32E |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68374 | beta-glucuronidase | - | 3.2.1.31 | from API ID32E |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 68377 | gamma-glutamyltransferase | - | 2.3.2.2 | from API NH |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 68374 | L-aspartate arylamidase | - | 3.4.11.21 | from API ID32E |
| 68374 | lipase | - | from API ID32E | |
| 68374 | lysine decarboxylase | - | 4.1.1.18 | from API ID32E |
| 68381 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API rID32STR |
| 68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API ID32E |
| 68374 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32E |
| 68377 | proline-arylamidase | - | 3.4.11.5 | from API NH |
| 68381 | pyrrolidonyl arylamidase | - | 3.4.19.3 | from API rID32STR |
| 68377 | tryptophan deaminase | - | 4.1.99.1 | from API NH |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 68377 | urease | - | 3.5.1.5 | from API NH |
| 68374 | urease | - | 3.5.1.5 | from API ID32E |
| @ref | ODC | ADH (Arg) | LDC (Lys) | URE | LARL | GAT | 5KG | LipaseLIP | Phenol red (Acidification)RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | N-Acetyl-beta-Glucosaminidasebeta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alpha-MaltosidasealphaMAL | L-aspartic acid arylamidaseAspA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45691 | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16564 | - | - | - | - | - | + | + | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 98.40 | no |
| 125439 | motility | BacteriaNetⓘ | no | 71.60 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.60 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.00 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.60 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 95.81 | yes |
| 125438 | aerobic | aerobicⓘ | no | 82.85 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 94.23 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.70 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 94.06 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| A novel quantitative real-time polymerase chain reaction method for detecting toxigenic Pasteurella multocida in nasal swabs from swine. | Scherrer S, Frei D, Wittenbrink MM. | Acta Vet Scand | 10.1186/s13028-016-0267-7 | 2016 | ||
| A Sensitive and Accurate Recombinase Polymerase Amplification Assay for Detection of the Primary Bacterial Pathogens Causing Bovine Respiratory Disease. | Conrad CC, Daher RK, Stanford K, Amoako KK, Boissinot M, Bergeron MG, Alexander T, Cook S, Ralston B, Zaheer R, Niu YD, McAllister T. | Front Vet Sci | 10.3389/fvets.2020.00208 | 2020 | ||
| Enzymology | Rapid and accurate identification of human isolates of Pasteurella and related species by sequencing the sodA gene. | Gautier AL, Dubois D, Escande F, Avril JL, Trieu-Cuot P, Gaillot O. | J Clin Microbiol | 10.1128/jcm.43.5.2307-2314.2005 | 2005 | |
| Pathogenicity | Linezolid activity compared to those of selected macrolides and other agents against aerobic and anaerobic pathogens isolated from soft tissue bite infections in humans. | Goldstein EJ, Citron DM, Merriam CV. | Antimicrob Agents Chemother | 10.1128/aac.43.6.1469 | 1999 | |
| Pathogenicity | Activity of gatifloxacin compared to those of five other quinolones versus aerobic and anaerobic isolates from skin and soft tissue samples of human and animal bite wound infections. | Goldstein EJ, Citron DM, Merriam CV, Tyrrell K, Warren Y. | Antimicrob Agents Chemother | 10.1128/aac.43.6.1475 | 1999 | |
| Pathogenicity | Comparative in vitro activities of DU-6859a, levofloxacin, ofloxacin, sparfloxacin, and ciprofloxacin against 387 aerobic and anaerobic bite wound isolates. | Goldstein EJ, Citron DM, Hunt Gerardo S, Hudspeth M, Merriam CV. | Antimicrob Agents Chemother | 10.1128/aac.41.5.1193 | 1997 | |
| Pathogenicity | In vitro activity of Bay 12-8039, a new 8-methoxyquinolone, compared to the activities of 11 other oral antimicrobial agents against 390 aerobic and anaerobic bacteria isolated from human and animal bite wound skin and soft tissue infections in humans. | Goldstein EJ, Citron DM, Hudspeth M, Hunt Gerardo S, Merriam CV. | Antimicrob Agents Chemother | 10.1128/aac.41.7.1552 | 1997 | |
| Pathogenicity | Activities of HMR 3004 (RU 64004) and HMR 3647 (RU 66647) compared to those of erythromycin, azithromycin, clarithromycin, roxithromycin, and eight other antimicrobial agents against unusual aerobic and anaerobic human and animal bite pathogens isolated from skin and soft tissue infections in humans. | Goldstein EJ, Citron DM, Hunt Gerardo S, Hudspeth M, Merriam CV. | Antimicrob Agents Chemother | 10.1128/aac.42.5.1127 | 1998 | |
| Pathogenicity | Comparative in vitro activities of azithromycin, Bay y 3118, levofloxacin, sparfloxacin, and 11 other oral antimicrobial agents against 194 aerobic and anaerobic bite wound isolates. | Goldstein EJ, Nesbit CA, Citron DM. | Antimicrob Agents Chemother | 10.1128/aac.39.5.1097 | 1995 | |
| Compilation of small ribosomal subunit RNA structures. | Neefs JM, Van de Peer Y, De Rijk P, Chapelle S, De Wachter R. | Nucleic Acids Res | 10.1093/nar/21.13.3025 | 1993 | ||
| Pasteurella canis soft tissue infection after a cat bite - A case report. | Hitkova HY, Hristova PM, Gergova RT, Alexandrova AS. | IDCases | 10.1016/j.idcr.2024.e01963 | 2024 | ||
| Pathogenicity | Establishment of a Multilocus Sequence Typing Scheme for Pasteurella canis Using Isolates from Infected Humans and Diseased Companion Animals. | Yoshida H, Kim JS, Maeda T, Goto M, Tsuyuki Y, Shizuno K, Takahashi T. | Ann Lab Med | 10.3343/alm.2024.0501 | 2025 | |
| Genetics | Pasteurella multocida genome assembly of Indonesian local isolates using long-read Oxford Nanopore Technology sequencing. | Prihandani SS, Wayan Teguh Wibawan I, Noor SM, Safika S, Khairullah AR, Susanti S, Wahyuwardani S, Andriani A, Sumarningsih S, Kurnianto H, Ariyanti T, Adinata Y, Nuradji H, Puarada ARR. | Open Vet J | 10.5455/ovj.2025.v15.i6.46 | 2025 | |
| Genetics | Virulence-associated Genome Sequences of Pasteurella canis and Unique Toxin Gene Prevalence of P. canis and Pasteurella multocida Isolated from Humans and Companion Animals. | Yoshida H, Kim JM, Maeda T, Goto M, Tsuyuki Y, Shibata S, Shizuno K, Okuzumi K, Kim JS, Takahashi T. | Ann Lab Med | 10.3343/alm.2023.43.3.263 | 2023 | |
| Enzymology | Development of PCR assays for species- and type-specific identification of Pasteurella multocida isolates. | Townsend KM, Frost AJ, Lee CW, Papadimitriou JM, Dawkins HJ. | J Clin Microbiol | 10.1128/jcm.36.4.1096-1100.1998 | 1998 | |
| Genetics | Draft Genome Sequence of Blood-Origin Pasteurella canis Strain PA42, Isolated from a Dog in Japan. | Maeda T, Yoshida H, Kim JM, Tsuyuki Y, Kurita G, Kim JS, Takahashi T | Microbiol Resour Announc | 10.1128/mra.00260-22 | 2022 |
| #16564 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22968 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #40590 | ; Curators of the CIP; |
| #45691 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 12400 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68374 | Automatically annotated from API ID32E . |
| #68377 | Automatically annotated from API NH . |
| #68381 | Automatically annotated from API rID32STR . |
| #117141 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103294 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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