Haemophilus parahaemolyticus (DSM 21417, ATCC 10014, CCUG 3716)

Name: Haemophilus parahaemolyticus (DSM 21417, ATCC 10014, CCUG 3716)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11708

Type strain

Strain Designation 536

Culture col. no. DSM 21417 ATCC 10014 CCUG 3716 CIP 56.86 NCTC 8479 1 more

NCBI tax ID(s) 1095744 735

Special Collections DSMZ CCUG CIP

History <- CCUG; 536 {2008} <- NCTC <- M. Pittman 1956, M. Pittman, N.I.H. : strain 536, Haemophilus haemolyticus CIP <- 1956, M. Pittman, N.I.H. : strain 536, Haemophilus haemolyticus

Links

Haemophilus parahaemolyticus 536 is a microaerophile, Gram-negative, rod-shaped bacterium that was isolated from human pulmonary infection.

Gram-negative rod-shaped microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 389305

ATCC 10014,NCTC 8479,CCUG 3716,CIP 56.86,DSM 21417

@ref 20215

Last LPSN update 2026-02-09 11:20:38

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pasteurellales

Family Pasteurellaceae

Genus Haemophilus

Species Haemophilus parahaemolyticus

Full scientific name Haemophilus parahaemolyticus Pittman 1953 (Approved Lists 1980)

BacDive ID	Other strains from **Haemophilus parahaemolyticus** (22)	Type strain
134766	H. parahaemolyticus Volle, CIP 60.87
134772	H. parahaemolyticus CIP 62.34
134895	H. parahaemolyticus 716.86, CIP 102708
135027	H. parahaemolyticus 174.87, CIP 102905
136150	H. parahaemolyticus 124.87, CIP 102863
136608	H. parahaemolyticus BM, CIP 100082
137189	H. parahaemolyticus A62-71, CIP 101263, NCTC 10794
137260	H. parahaemolyticus 736, CIP 56.87
137944	H. parahaemolyticus 235-86, CIP 102248
138024	H. parahaemolyticus 522.86, CIP 102519
144973	H. parahaemolyticus CCUG 27334
145832	H. parahaemolyticus CCUG 29740
146988	H. parahaemolyticus CCUG 32604
147260	H. parahaemolyticus CCUG 33219
148836	H. parahaemolyticus CCUG 36104, MCCM 02687
148837	H. parahaemolyticus CCUG 36112, MCCM 00317
150547	H. parahaemolyticus CCUG 41564
150763	H. parahaemolyticus CCUG 42230
153026	H. parahaemolyticus CCUG 48342
153415	H. parahaemolyticus CCUG 49512
153914	H. parahaemolyticus CCUG 51599
156630	H. parahaemolyticus CCUG 63750

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
121559	negative	rod-shaped
125438			91.397
125438	negative		97.978

Colony morphology

@ref	Incubation period	Hemolysis ability
15693	2-3 days
121559		1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
15693	HAEMOPHILUS MEDIUM (DSMZ Medium 804)	Medium recipe at MediaDive	Name: HAEMOPHILUS MEDIUM (DSMZ Medium 804) Composition: Mueller-Hinton broth 21.0 g/l Yeast extract 5.0 g/l Distilled water
37698	MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml);PolyVitex mischung (10.000 ml)
121559	CIP Medium 10	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
15693	positive	growth	37
37698	positive	growth	37
121559	positive	growth	25-37
121559	negative	growth	15
121559	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
15693	microaerophile
121559	obligate aerobe
125439	obligate aerobe	94.1

Spore formation

@ref	Spore formation	Confidence
125438		93.732

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68377	15824 ChEBI	D-fructose	+	builds acid from	from API NH
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68377	17634 ChEBI	D-glucose	+	builds acid from	from API NH
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
121559	4853 ChEBI	esculin	-	hydrolysis
68371	4853 ChEBI	esculin	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
121559	606565 ChEBI	hippurate	-	hydrolysis
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68377	17306 ChEBI	maltose	+	builds acid from	from API NH
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
121559	17632 ChEBI	nitrate	+	reduction
121559	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68377	27897 ChEBI	tryptophan	-	energy source	from API NH
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
121559	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68377	35581 ChEBI	indole		from API NH
121559	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68377	35581 ChEBI	indole	-	from API NH

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
121559	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
121559	beta-galactosidase	-	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
68377	beta-galactosidase	-	3.2.1.23	from API NH
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
15693	catalase	+	1.11.1.6
121559	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
15693	cytochrome-c oxidase	+	1.9.3.1
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
121559	gamma-glutamyltransferase	-	2.3.2.2
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
121559	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
121559	ornithine decarboxylase	-	4.1.1.17
121559	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
68377	tryptophan deaminase	-	4.1.99.1	from API NH
121559	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	formaldehyde oxidation	100	3 of 3
66794	adipate degradation	100	2 of 2
66794	vitamin K metabolism	100	5 of 5
66794	L-lactaldehyde degradation	100	3 of 3
66794	gluconeogenesis	100	8 of 8
66794	ppGpp biosynthesis	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	denitrification	100	2 of 2
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	methylglyoxal degradation	100	5 of 5
66794	palmitate biosynthesis	95.45	21 of 22
66794	tetrahydrofolate metabolism	92.86	13 of 14
66794	pentose phosphate pathway	90.91	10 of 11
66794	threonine metabolism	90	9 of 10
66794	valine metabolism	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	C4 and CAM-carbon fixation	87.5	7 of 8
66794	photosynthesis	85.71	12 of 14
66794	vitamin B1 metabolism	84.62	11 of 13
66794	glycine betaine biosynthesis	80	4 of 5
66794	metabolism of amino sugars and derivatives	80	4 of 5
66794	peptidoglycan biosynthesis	80	12 of 15
66794	serine metabolism	77.78	7 of 9
66794	molybdenum cofactor biosynthesis	77.78	7 of 9
66794	lipid A biosynthesis	77.78	7 of 9
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	isoleucine metabolism	75	6 of 8
66794	glycogen biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	CMP-KDO biosynthesis	75	3 of 4
66794	heme metabolism	71.43	10 of 14
66794	Entner Doudoroff pathway	70	7 of 10
66794	phenylalanine metabolism	69.23	9 of 13
66794	purine metabolism	68.09	64 of 94
66794	acetoin degradation	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	flavin biosynthesis	66.67	10 of 15
66794	CO2 fixation in Crenarchaeota	66.67	6 of 9
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	alanine metabolism	65.52	19 of 29
66794	glycolysis	64.71	11 of 17
66794	pyrimidine metabolism	64.44	29 of 45
66794	proline metabolism	63.64	7 of 11
66794	leucine metabolism	61.54	8 of 13
66794	degradation of hexoses	61.11	11 of 18
66794	NAD metabolism	61.11	11 of 18
66794	lipoate biosynthesis	60	3 of 5
66794	glycogen metabolism	60	3 of 5
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	glutamate and glutamine metabolism	57.14	16 of 28
66794	glutathione metabolism	57.14	8 of 14
66794	isoprenoid biosynthesis	53.85	14 of 26
66794	oxidative phosphorylation	53.85	49 of 91
66794	methionine metabolism	53.85	14 of 26
66794	tryptophan metabolism	52.63	20 of 38
66794	non-pathway related	52.63	20 of 38
66794	histidine metabolism	51.72	15 of 29
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	citric acid cycle	50	7 of 14
66794	ethanol fermentation	50	1 of 2
66794	sulfopterin metabolism	50	2 of 4
66794	starch degradation	50	5 of 10
66794	butanoate fermentation	50	2 of 4
66794	glycine metabolism	50	5 of 10
66794	biotin biosynthesis	50	2 of 4
66794	nitrate assimilation	44.44	4 of 9
66794	d-mannose degradation	44.44	4 of 9
66794	cysteine metabolism	44.44	8 of 18
66794	propanol degradation	42.86	3 of 7
66794	tyrosine metabolism	42.86	6 of 14
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	cardiolipin biosynthesis	42.86	3 of 7
66794	lysine metabolism	42.86	18 of 42
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	lipid metabolism	38.71	12 of 31
66794	urea cycle	38.46	5 of 13
66794	arginine metabolism	37.5	9 of 24
66794	ketogluconate metabolism	37.5	3 of 8
66794	vitamin B6 metabolism	36.36	4 of 11
66794	degradation of pentoses	35.71	10 of 28
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	octane oxidation	33.33	1 of 3
66794	cyanate degradation	33.33	1 of 3
66794	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	degradation of sugar alcohols	31.25	5 of 16
66794	coenzyme M biosynthesis	30	3 of 10
66794	propionate fermentation	30	3 of 10
66794	metabolism of disaccharids	27.27	3 of 11
66794	d-xylose degradation	27.27	3 of 11
66794	3-phenylpropionate degradation	26.67	4 of 15
66794	dTDPLrhamnose biosynthesis	25	2 of 8
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	sulfate reduction	23.08	3 of 13
66794	phosphatidylethanolamine bioynthesis	23.08	3 of 13
66794	phenylpropanoid biosynthesis	23.08	3 of 13

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
121559	-	+	-	-	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
121559	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
15693	+	+	+	+	-	+	-	+	-	-	-	-	-
15693	+	+	+	+	-	+	-	+	-	-	+	-	-
15693	-	+	+	+	+	-	+	-	+	-	-	+	-
15693	-	+	+	+	+	-	+	-	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Disease	-
#Host	#Human	-
#Host Body-Site	#Oral cavity and airways	#Lung

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
15693	human pulmonary infection			USA	USA	North America
44686	Pulmonary infection	1939	South Carolina	USA	USA	North America
121559	Human, Sputum		South Carolina	United States of America	USA	North America	1939

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
15693	2	Risk group (German classification) According to TRBA 466
121559	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM1688938v1 assembly for Haemophilus parahaemolyticus FDAARGOS_1199	complete	GCA_016889385	735.52	8121857780	735	97.97
66792	53694_G01 assembly for Haemophilus parahaemolyticus HK385 NCTC 8479	contig	GCA_900450675	1095744.7	2916270391	1095744	78.63
66792	ASM201503v1 assembly for Haemophilus parahaemolyticus CCUG 3716	scaffold	GCA_002015035	735.3	2924818472	735	73.45

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Haemophilus parahaemolyticus partial 16S rRNA gene, strain NCTC 8479T	AJ295746	1466	1095744
15693	Haemophilus parahaemolyticus strain NCTC 8479 16S ribosomal RNA gene, partial sequence	M75073	1477	735
124043	Haemophilus parahaemolyticus NCTC 8479 gene for 16S rRNA, partial sequence.	LC752406	1466	735

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Haemophilus parahaemolyticus CCUG 3716
NCBI: GCA_002015035

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.10	no
125439	gram_stain	BacteriaNetⓘ	negative	63.40	no
125439	motility	BacteriaNetⓘ	no	67.80	no
125439	spore_formation	BacteriaNetⓘ	no	89.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Haemophilus parahaemolyticus strain FDAARGOS_1199 strain Not applicable
PATRIC: 735.52

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.98	no
125438	anaerobic	anaerobicⓘ	no	91.74	yes
125438	spore-forming	spore-formingⓘ	no	93.73	no
125438	aerobic	aerobicⓘ	no	87.18	no
125438	thermophilic	thermophileⓘ	no	98.00	yes
125438	flagellated	motile2+ⓘ	no	91.40	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Rapid identification of methylase specificity (RIMS-seq) jointly identifies methylated motifs and generates shotgun sequencing of bacterial genomes.	Baum C, Lin YC, Fomenkov A, Anton BP, Chen L, Yan B, Evans TC, Roberts RJ, Tolonen AC, Ettwiller L.	Nucleic Acids Res	10.1093/nar/gkab705	2021
Enzymology	Duplex Quantitative PCR Assay for Detection of Haemophilus influenzae That Distinguishes Fucose- and Protein D-Negative Strains.	de Gier C, Pickering JL, Richmond PC, Thornton RB, Kirkham LA.	J Clin Microbiol	10.1128/jcm.00982-16	2016
Enzymology	Selective microbial genomic DNA isolation using restriction endonucleases.	Barnes HE, Liu G, Weston CQ, King P, Pham LK, Waltz S, Helzer KT, Day L, Sphar D, Yamamoto RT, Forsyth RA.	PLoS One	10.1371/journal.pone.0109061	2014
Phylogeny	Development of a PCR assay for identification of staphylococci at genus and species levels.	Martineau F, Picard FJ, Ke D, Paradis S, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.39.7.2541-2547.2001	2001
Enzymology	Use of tuf sequences for genus-specific PCR detection and phylogenetic analysis of 28 streptococcal species.	Picard FJ, Ke D, Boudreau DK, Boissinot M, Huletsky A, Richard D, Ouellette M, Roy PH, Bergeron MG.	J Clin Microbiol	10.1128/jcm.42.8.3686-3695.2004	2004
Enzymology	Rapid concentration and molecular enrichment approach for sensitive detection of Escherichia coli and Shigella species in potable water samples.	Maheux AF, Bissonnette L, Boissinot M, Bernier JL, Huppe V, Picard FJ, Berube E, Bergeron MG.	Appl Environ Microbiol	10.1128/aem.02337-10	2011
	Development of a PCR assay for rapid detection of enterococci.	Ke D, Picard FJ, Martineau F, Menard C, Roy PH, Ouellette M, Bergeron MG.	J Clin Microbiol	10.1128/jcm.37.11.3497-3503.1999	1999
	Investigating the target recognition of DNA cytosine-5 methyltransferase HhaI by library selection using in vitro compartmentalisation.	Lee YF, Tawfik DS, Griffiths AD.	Nucleic Acids Res	10.1093/nar/gkf617	2002
	Characterization of Haemophilus ducreyi-specific T-cell lines from lesions of experimentally infected human subjects.	Gelfanova V, Humphreys TL, Spinola SM.	Infect Immun	10.1128/iai.69.7.4224-4231.2001	2001
	Dysregulated immune profiles for skin and dendritic cells are associated with increased host susceptibility to Haemophilus ducreyi infection in human volunteers.	Humphreys TL, Li L, Li X, Janowicz DM, Fortney KR, Zhao Q, Li W, McClintick J, Katz BP, Wilkes DS, Edenberg HJ, Spinola SM.	Infect Immun	10.1128/iai.00777-07	2007
	Cytolethal distending toxin of Haemophilus ducreyi induces apoptotic death of Jurkat T cells.	Gelfanova V, Hansen EJ, Spinola SM.	Infect Immun	10.1128/iai.67.12.6394-6402.1999	1999
Metabolism	Ability of oral bacteria to degrade fibronectin.	Wikstrom M, Linde A.	Infect Immun	10.1128/iai.51.2.707-711.1986	1986
	Compilation of small ribosomal subunit RNA structures.	Neefs JM, Van de Peer Y, De Rijk P, Chapelle S, De Wachter R.	Nucleic Acids Res	10.1093/nar/21.13.3025	1993

References

#15693	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21417
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#37698	; Curators of the CIP;
#44686	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 3716
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68371	Automatically annotated from API 50CH acid .
#68377	Automatically annotated from API NH .
#68382	Automatically annotated from API zym .
#121559	Collection of Institut Pasteur ; Curators of the CIP; CIP 56.86
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Haemophilus parahaemolyticus (DSM 21417, ATCC 10014, CCUG 3716)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API zym

API 50CHac

API NH

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_016889385

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media