Gallibacterium anatis (DSM 16844, ATCC 43329, CCUG 15563)

Name: Gallibacterium anatis (DSM 16844, ATCC 43329, CCUG 15563)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11697

Type strain

Strain Designation F149

Culture col. no. DSM 16844 ATCC 43329 CCUG 15563 NCTC 11413 F149 1 more

NCBI tax ID(s) 1121910 750

Special Collections DSMZ CCUG CIP

History DSMZ <- H. Christensen; F149 <- M. Bisgaard CIP <- 1986, NCTC <- 1981, M. Bisgaard, Copenhagen, Denmark: strain F 149, Taxon 1

Links

Gallibacterium anatis F149 is an animal pathogen that was isolated from duck.

animal pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 46835

ATCC 43329,NCTC 11413,CCUG 15563,CCUG 26456,CIP 102679,DSM 16844

@ref 20215

Last LPSN update 2026-05-29 08:27:37

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pasteurellales

Family Pasteurellaceae

Genus Gallibacterium

Species Gallibacterium anatis

Full scientific name Gallibacterium anatis (Mutters et al. 1985) Christensen et al. 2003

Synonyms (1)

Pasteurella anatis

BacDive ID	Other strains from **Gallibacterium anatis** (2)	Type strain
135432	G. anatis CNPA63, CIP 104143, CCM 5995, CCUG 23138
144752	G. anatis CCUG 26455, MCCM 00141

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		94.037
125438		98	negative

Colony morphology

@ref	Type of hemolysis	Hemolysis ability	Incubation period
6629	gamma	0	1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6629	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
6629	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
38103	MEDIUM 118 - for Pasteurella, Actinobacillus and Psychrobacter frigidicola		Distilled water make up to (1000.000 ml);Yeast extract (1.000 g);Tryptocasein soy agar (40.000 g)
116375	CIP Medium 118-b	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6629	positive	growth	37
38103	positive	growth	37

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125439		93.585
125438		90.212

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68377	17634 ChEBI	D-glucose	+	builds acid from	from API NH
68377	18257 ChEBI	ornithine	-	degradation	from API NH
68377	16199 ChEBI	urea	-	hydrolysis	from API NH

Enzymes

@ref	Value	Activity	Ec
6629	catalase	+	1.11.1.6
6629	cytochrome-c oxidase	+	1.9.3.1
68377	ornithine decarboxylase	-	4.1.1.17	from API NH
68377	urease	-	3.5.1.5	from API NH

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
6629	+	+	-	+	-	-	-	+	+	-	+	-	-
6629	+	+	-	+	-	-	-	+	+/-	not determinedn.d.	not determinedn.d.	-	+/-
6629	+/-	+	+	-	+	-	-	-	+	+/-	not determinedn.d.	not determinedn.d.	-
6629	-	+	+	-	+	-	-	-	+	+	-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Host	#Birds

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Isolation date
6629	duck	Denmark	DNK	Europe
116375	Animal, Duck, intestine	Denmark	DNK	Europe	1981

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
6629		2	Risk group (German classification) According to TRBA 466
116375		2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	49950_E01 assembly for Gallibacterium anatis NCTC11413	contig	GCA_900450735	750.26	2833159525	750	74.81
66792	ASM77226v1 assembly for Gallibacterium anatis DSM 16844 = F 149 F149	contig	GCA_000772265	1121910.4	2833090974	1121910	55.89
66792	ASM37978v1 assembly for Gallibacterium anatis DSM 16844 = F 149	scaffold	GCA_000379785	1121910.3	2514885008	1121910	55.29

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Gallibacterium anatis DSM 16844 = F 149 strain ATCC 43329 16S ribosomal RNA gene, partial sequence	M75054	1478	1121910
20218	Bisgaard Taxon 3 strain CCUG 15563 16S ribosomal RNA gene, partial sequence	L06079	1488	28158
20218	Pasteurella anatis strain F149 16S ribosomal RNA gene, partial sequence	AF228001	1471	1121910

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 49950_E01 assembly for Gallibacterium anatis NCTC11413
NCBI: GCA_900450735

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	84.25	no
125439	gram_stain	BacteriaNetⓘ	positive	53.61	no
125439	motility	BacteriaNetⓘ	no	80.30	no
125439	spore_formation	BacteriaNetⓘ	no	93.59	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Gallibacterium anatis DSM 16844 = F 149 DSM 16844
NCBI: GCA_000379785.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.00	no
125438	anaerobic	anaerobicⓘ	no	94.79	no
125438	aerobic	aerobicⓘ	no	75.50	no
125438	spore-forming	spore-formingⓘ	no	90.21	no
125438	thermophilic	thermophileⓘ	no	98.50	yes
125438	flagellated	motile2+ⓘ	no	94.04	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Isolation and characterization of multidrug resistant Gallibacterium anatis biovar haemolytica strains from Polish geese and hens.	Karwanska M, Wieliczko A, Bojesen AM, Villumsen KR, Krzyzewska-Dudek E, Wozniak-Biel A.	Vet Res	10.1186/s13567-023-01198-2	2023
	Sensory neurons regulate stimulus-dependent humoral immunity in mouse models of bacterial infection and asthma.	Aguilar D, Zhu F, Millet A, Millet N, Germano P, Pisegna J, Akbari O, Doherty TA, Swidergall M, Jendzjowsky N.	Nat Commun	10.1038/s41467-024-53269-3	2024
Pathogenicity	Inhibition of the lipoxin A4 and resolvin D1 receptor impairs host response to acute lung injury caused by pneumococcal pneumonia in mice.	Siegel ER, Croze RH, Fang X, Matthay MA, Gotts JE.	Am J Physiol Lung Cell Mol Physiol	10.1152/ajplung.00046.2021	2021
Metabolism	Alterins Produced by Oyster-Associated Pseudoalteromonas Are Antibacterial Cyclolipopeptides with LPS-Binding Activity.	Desriac F, El Harras A, Simon M, Bondon A, Brillet B, Le Chevalier P, Pugniere M, Got P, Destoumieux-Garzon D, Fleury Y.	Mar Drugs	10.3390/md18120630	2020
	Deciphering the metabolic capabilities of Bifidobacteria using genome-scale metabolic models.	Devika NT, Raman K.	Sci Rep	10.1038/s41598-019-54696-9	2019
	Elicitation of integrated immunity in mice by a novel pneumococcal polysaccharide vaccine conjugated with HBV surface antigen.	Qian W, Huang Z, Chen Y, Yang J, Wang L, Wu K, Chen M, Chen N, Duan Y, Shi J, Zhang Y, Li Q.	Sci Rep	10.1038/s41598-020-62185-7	2020
	Anti-bacterial antibodies in multiple myeloma patients at disease presentation, in response to therapy and in remission: implications for patient management.	Chicca IJ, Heaney JLJ, Iqbal G, Dunn JA, Bowcock S, Pratt G, Yong KL, Planche TD, Richter A, Drayson MT.	Blood Cancer J	10.1038/s41408-020-00370-7	2020
Pathogenicity	Impact of an urban effluent on antibiotic resistance of riverine Enterobacteriaceae and Aeromonas spp.	Goni-Urriza M, Capdepuy M, Arpin C, Raymond N, Caumette P, Quentin C.	Appl Environ Microbiol	10.1128/aem.66.1.125-132.2000	2000
	Multidrug Resistance of Gallibacterium anatis Biovar Haemolytica Isolated from the Reproductive Tracts of Laying Hens.	Kursa O.	Pathogens	10.3390/pathogens13110989	2024
Enzymology	Gallibacterium anatis bacteremia in a human.	Aubin GG, Haloun A, Treilhaud M, Reynaud A, Corvec S.	J Clin Microbiol	10.1128/jcm.01638-13	2013
Enzymology	Rapid and accurate identification of human isolates of Pasteurella and related species by sequencing the sodA gene.	Gautier AL, Dubois D, Escande F, Avril JL, Trieu-Cuot P, Gaillot O.	J Clin Microbiol	10.1128/jcm.43.5.2307-2314.2005	2005
Enzymology	A loop-mediated isothermal amplification procedure targeting the sodA gene for rapid and specific identification of Gallibacterium anatis.	Stepien-Pysniak D, Kosikowska U, Hauschild T, Burzynski A, Wilczynski J, Kolinska A, Nowaczek A, Marek A	Poult Sci	10.3382/ps/pex420	2018
Phylogeny	Genetic relationships among avian isolates classified as Pasteurella haemolytica, 'Actinobacillus salpingitidis' or Pasteurella anatis with proposal of Gallibacterium anatis gen. nov., comb. nov. and description of additional genomospecies within Gallibacterium gen. nov.	Christensen H, Bisgaard M, Bojesen AM, Mutters R, Olsen JE	Int J Syst Evol Microbiol	10.1099/ijs.0.02330-0	2003
Phylogeny	Paenibacillus phoenicis sp. nov., isolated from the Phoenix Lander assembly facility and a subsurface molybdenum mine.	Benardini JN, Vaishampayan PA, Schwendner P, Swanner E, Fukui Y, Osman S, Satomi M, Venkateswaran K.	Int J Syst Evol Microbiol	10.1099/ijs.0.021428-0	2011

References

#6629	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16844
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#38103	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68377	Automatically annotated from API NH .
#116375	Collection of Institut Pasteur ; Curators of the CIP; CIP 102679
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Gallibacterium anatis (DSM 16844, ATCC 43329, CCUG 15563)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Metabolite utilization

Enzymes

API NH

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900450735

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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