Name: Brevibacillus parabrevis Oka
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11412

Type strain:

Species: Brevibacillus parabrevis

Strain Designation: Oka, 779

Culture col. no.: DSM 5550, ATCC 8186, CIP 110335, IFO 12333, NBRC 12333, NRS 779

Strain history: CIP <- 2011, DSMZ <- NRRL <- N.R. Smith: strain 779 <- 1940, J.R. Dubos, Rockefeller Inst., as strain Oka Bacillus brevis

NCBI tax ID(s): 1255633 (strain), 54914 (species)

SI-ID 8373

LMG 16011, ATCC 8186, CCRC 10600, DSM 5550, IFO 12333, NRRL NRS-779, CECT 4047, KCTC 3003, NBRC 12333, BCRC 10600, CIP 110335

Other strains from Brevibacillus parabrevis

B. parabrevis DSM 8376, ATCC 10027, CIP 103840, ... (type strain)
B. parabrevis BG, DSM 362, ATCC 8185, CCM 1089, ...
B. parabrevis Gibson 108, DSM 370, CCM 1463, ...
B. parabrevis LBa, DSM 5608, NRS 781
B. parabrevis TC, DSM 5618, NRS 780
B. parabrevis CCUG 27608, LMG 15101
B. parabrevis CCUG 29760
B. parabrevis CCUG 60383
B. parabrevis CCUG 67681 Q

Section

Brevibacillus parabrevis Oka is an obligate aerobe, mesophilic, Gram-positive human pathogen that was isolated from Oka cheese.

Gram-positive
motile
rod-shaped
human pathogen
mesophilic
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Brevibacillus*
	Species	**Brevibacillus parabrevis**
	Full Scientific Name (LPSN)	Brevibacillus parabrevis (Takagi et al. 1993) Shida et al. 1996

Synonym

Bacillus parabrevis

Information on morphological and physiological properties Morphology

[Ref.: #121539]	Gram stain	positive

[Ref.: #121539]	Cell shape	rod-shaped

[Ref.: #121539]	Motility	yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2184]

Culture medium

TRYPTONE SOYA BROTH (TSB) (DSMZ Medium 545)

[Ref.: #2184]

Culture medium growth

[Ref.: #2184]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2184]

Culture medium composition

expand / minimize

[Ref.: #2184]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #2184]

Culture medium growth

[Ref.: #2184]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2184]

Culture medium composition

expand / minimize

[Ref.: #34722]

Culture medium

MEDIUM 328- for nutrient agar

[Ref.: #34722]

Culture medium growth

[Ref.: #34722]

Culture medium composition

expand / minimize

[Ref.: #121539]

Culture medium

CIP Medium 328

[Ref.: #121539]

Culture medium growth

[Ref.: #121539]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #2184]			growth	30 °C
[Ref.: #34722]			growth	30 °C

[Ref.: #2184]	Temperature range	mesophilic
[Ref.: #34722]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #121539]

Oxygen tolerance

obligate aerobe

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #121539]		nitrate ChEBI	+	reduction
[Ref.: #121539]		nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #121539]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #121539]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #121539]	oxidase	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #121539]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121539]	12526	-	+	+	+	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2184]	Sample type/isolated from	Oka cheese

[Ref.: #121539]	Sample type/isolated from	Food, Oka cheese
[Ref.: #121539]	Isolation date	1940
* marker position based on {}

Isolation sources categories

#Engineered

#Food production

#Dairy product

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB680273 (>99% sequence identity) for Brevibacillus from Microbeatlas

Aquatic Samples	479
Soil Samples	119
Animal Samples	42
Plant Samples	13
Total Samples	653

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2184]	Pathogenicity (human)	yes, in single cases
[Ref.: #2184]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #121539]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Brevibacillus parabrevis gene for 16S rRNA, partial sequence, strain: NBRC 12333	AB680273	1461	ENA	54914 tax ID	*
[Ref.: #20218]	Brevibacillus parabrevis clone KB-1F 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence	AF478097	587	ENA	54914 tax ID	*

[Ref.: #2184]

GC-content

47.9 mol%

Availability in culture collections External links

[Ref.: #2184]

Culture collection no.

DSM 5550, ATCC 8186, CIP 110335, IFO 12333, NBRC 12333, NRS 779

[Ref.: #80644]

SI-ID 8373

References

#2184

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5550

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#34722 ; Curators of the CIP;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80644

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID8373.1 )

#121539 Collection of Institut Pasteur ; Curators of the CIP; CIP 110335
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Brevibacillus parabrevis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF