Name: Thermobifida halotolerans DSM 44931
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11261

Type strain:

Species: Thermobifida halotolerans

Culture col. no.: DSM 44931, JCM 16012, KCTC 19123, YIM 90462

Strain history: <- WJ Li, Yunnan Univ, China

NCBI tax ID(s): 483545 (species)

SI-ID 297454

DSM 44931, KCTC 19123, JCM 16012

Section

Thermobifida halotolerans DSM 44931 is an aerobe, spore-forming, mesophilic bacterium that was isolated from salt well.

Gram-positive
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Nocardiopsidaceae*
	Genus	*Thermobifida*
	Species	**Thermobifida halotolerans**
	Full Scientific Name (LPSN)	Thermobifida halotolerans Yang et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #67771]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #19891]	Colony color	Beige
[Ref.: #19891]	Incubation period	10-14 days
[Ref.: #19891]	Cultivation medium used	ISP 2

[Ref.: #19891]	Colony color	Beige
[Ref.: #19891]	Incubation period	10-14 days
[Ref.: #19891]	Cultivation medium used	ISP 3

[Ref.: #19891]	Colony color	Beige
[Ref.: #19891]	Incubation period	10-14 days
[Ref.: #19891]	Cultivation medium used	ISP 4

[Ref.: #19891]	Colony color	Beige
[Ref.: #19891]	Incubation period	10-14 days
[Ref.: #19891]	Cultivation medium used	ISP 5

[Ref.: #19891]	Colony color	Beige
[Ref.: #19891]	Incubation period	10-14 days
[Ref.: #19891]	Cultivation medium used	ISP 6

[Ref.: #19891]	Colony color	Beige
[Ref.: #19891]	Incubation period	10-14 days
[Ref.: #19891]	Cultivation medium used	ISP 7

[Ref.: #19891]	Multicellular complex forming ability	no
[Ref.: #19891]	Medium Name (multicellularity)	ISP 2

[Ref.: #19891]	Multicellular complex forming ability	no
[Ref.: #19891]	Medium Name (multicellularity)	ISP 3

[Ref.: #19891]	Multicellular complex forming ability	no
[Ref.: #19891]	Medium Name (multicellularity)	ISP 4

[Ref.: #19891]	Multicellular complex forming ability	no
[Ref.: #19891]	Medium Name (multicellularity)	ISP 5

[Ref.: #19891]	Multicellular complex forming ability	no
[Ref.: #19891]	Medium Name (multicellularity)	ISP 6

[Ref.: #19891]	Multicellular complex forming ability	no
[Ref.: #19891]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12101]

Culture medium

CZAPEK PEPTONE AGAR (DSMZ Medium 83)

[Ref.: #12101]

Culture medium growth

[Ref.: #12101]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12101]

Culture medium composition

expand / minimize

[Ref.: #12101]

Culture medium

GPHF-MEDIUM (DSMZ Medium 553)

[Ref.: #12101]

Culture medium growth

[Ref.: #12101]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12101]

Culture medium composition

expand / minimize

[Ref.: #19891]

Culture medium

ISP 2

[Ref.: #19891]

Culture medium growth

[Ref.: #19891]

Culture medium composition

expand / minimize

[Ref.: #19891]

Culture medium

ISP 3

[Ref.: #19891]

Culture medium growth

[Ref.: #19891]

Culture medium composition

expand / minimize

[Ref.: #19891]

Culture medium

ISP 4

[Ref.: #19891]

Culture medium growth

[Ref.: #19891]

Culture medium composition

expand / minimize

[Ref.: #19891]

Culture medium

ISP 5

[Ref.: #19891]

Culture medium growth

[Ref.: #19891]

Culture medium composition

expand / minimize

[Ref.: #19891]

Culture medium

ISP 6

[Ref.: #19891]

Culture medium growth

[Ref.: #19891]

Culture medium composition

expand / minimize

[Ref.: #19891]

Culture medium

ISP 7

[Ref.: #19891]

Culture medium growth

[Ref.: #19891]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #12101]	growth	37 °C
[Ref.: #19891]	optimum	37 °C
[Ref.: #67770]	growth	37 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #12101]	Temperature range	mesophilic
[Ref.: #19891]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #12101]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %91.703

[Ref.: #67770]

Observation

quinones: MK-10(H₆), MK-10(H₈)

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19891]	703	not determinedn.d.	-	+	+	-	+	+	-	-	-	+	+	-	+	+	+	+	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	threonine metabolism	100	10 of 10
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	cardiolipin biosynthesis	100	7 of 7
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	4-hydroxymandelate degradation	100	9 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	100	9 of 9
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	enterobactin biosynthesis	100	3 of 3
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	glycogen biosynthesis	100	4 of 4
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	vitamin K metabolism	100	5 of 5
[Ref.: #66794]	sulfopterin metabolism	100	4 of 4
[Ref.: #66794]	denitrification	100	2 of 2
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	glycine betaine biosynthesis	100	5 of 5
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	cellulose degradation	100	5 of 5
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	tetrahydrofolate metabolism	92.86	13 of 14
[Ref.: #66794]	phenylalanine metabolism	92.31	12 of 13
[Ref.: #66794]	pentose phosphate pathway	90.91	10 of 11
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	88.89	8 of 9
[Ref.: #66794]	C4 and CAM-carbon fixation	87.5	7 of 8
[Ref.: #66794]	gluconeogenesis	87.5	7 of 8
[Ref.: #66794]	peptidoglycan biosynthesis	86.67	13 of 15
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	heme metabolism	85.71	12 of 14
[Ref.: #66794]	purine metabolism	84.04	79 of 94
[Ref.: #66794]	NAD metabolism	83.33	15 of 18
[Ref.: #66794]	glycolate and glyoxylate degradation	83.33	5 of 6
[Ref.: #66794]	glycolysis	82.35	14 of 17
[Ref.: #66794]	glutamate and glutamine metabolism	82.14	23 of 28
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	factor 420 biosynthesis	80	4 of 5
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	phenylacetate degradation (aerobic)	80	4 of 5
[Ref.: #66794]	ethylmalonyl-CoA pathway	80	4 of 5
[Ref.: #66794]	Entner Doudoroff pathway	80	8 of 10
[Ref.: #66794]	starch degradation	80	8 of 10
[Ref.: #66794]	propionate fermentation	80	8 of 10
[Ref.: #66794]	vitamin B12 metabolism	79.41	27 of 34
[Ref.: #66794]	alanine metabolism	79.31	23 of 29
[Ref.: #66794]	tryptophan metabolism	78.95	30 of 38
[Ref.: #66794]	citric acid cycle	78.57	11 of 14
[Ref.: #66794]	molybdenum cofactor biosynthesis	77.78	7 of 9
[Ref.: #66794]	leucine metabolism	76.92	10 of 13
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	toluene degradation	75	3 of 4
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
[Ref.: #66794]	pyrimidine metabolism	73.33	33 of 45
[Ref.: #66794]	methionine metabolism	73.08	19 of 26
[Ref.: #66794]	metabolism of disaccharids	72.73	8 of 11
[Ref.: #66794]	propanol degradation	71.43	5 of 7
[Ref.: #66794]	lipid metabolism	70.97	22 of 31
[Ref.: #66794]	isoprenoid biosynthesis	69.23	18 of 26
[Ref.: #66794]	urea cycle	69.23	9 of 13
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	arginine metabolism	66.67	16 of 24
[Ref.: #66794]	methane metabolism	66.67	2 of 3
[Ref.: #66794]	sulfoquinovose degradation	66.67	2 of 3
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	degradation of sugar acids	64	16 of 25
[Ref.: #66794]	proline metabolism	63.64	7 of 11
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	non-pathway related	63.16	24 of 38
[Ref.: #66794]	oxidative phosphorylation	62.64	57 of 91
[Ref.: #66794]	degradation of sugar alcohols	62.5	10 of 16
[Ref.: #66794]	lysine metabolism	61.9	26 of 42
[Ref.: #66794]	sulfate reduction	61.54	8 of 13
[Ref.: #66794]	gallate degradation	60	3 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	60	3 of 5
[Ref.: #66794]	myo-inositol biosynthesis	60	6 of 10
[Ref.: #66794]	4-hydroxyphenylacetate degradation	60	6 of 10
[Ref.: #66794]	carotenoid biosynthesis	59.09	13 of 22
[Ref.: #66794]	histidine metabolism	58.62	17 of 29
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	58.33	7 of 12
[Ref.: #66794]	ubiquinone biosynthesis	57.14	4 of 7
[Ref.: #66794]	tyrosine metabolism	57.14	8 of 14
[Ref.: #66794]	d-mannose degradation	55.56	5 of 9
[Ref.: #66794]	cysteine metabolism	55.56	10 of 18
[Ref.: #66794]	degradation of hexoses	55.56	10 of 18
[Ref.: #66794]	phenol degradation	55	11 of 20
[Ref.: #66794]	vitamin B1 metabolism	53.85	7 of 13
[Ref.: #66794]	polyamine pathway	52.17	12 of 23
[Ref.: #66794]	androgen and estrogen metabolism	50	8 of 16
[Ref.: #66794]	lactate fermentation	50	2 of 4
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	degradation of pentoses	50	14 of 28
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	ketogluconate metabolism	50	4 of 8
[Ref.: #66794]	resorcinol degradation	50	1 of 2
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	glutathione metabolism	50	7 of 14
[Ref.: #66794]	selenocysteine biosynthesis	50	3 of 6
[Ref.: #66794]	biotin biosynthesis	50	2 of 4
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	47.06	8 of 17
[Ref.: #66794]	3-phenylpropionate degradation	46.67	7 of 15
[Ref.: #66794]	phenylpropanoid biosynthesis	46.15	6 of 13
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	daunorubicin biosynthesis	44.44	4 of 9
[Ref.: #66794]	allantoin degradation	44.44	4 of 9
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	carnitine metabolism	37.5	3 of 8
[Ref.: #66794]	dTDPLrhamnose biosynthesis	37.5	3 of 8
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	arachidonic acid metabolism	33.33	6 of 18
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	benzoyl-CoA degradation	28.57	2 of 7
[Ref.: #66794]	aclacinomycin biosynthesis	28.57	2 of 7
[Ref.: #66794]	chlorophyll metabolism	27.78	5 of 18
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
[Ref.: #66794]	ascorbate metabolism	27.27	6 of 22
[Ref.: #66794]	CMP-KDO biosynthesis	25	1 of 4
[Ref.: #66794]	vitamin E metabolism	25	1 of 4
[Ref.: #66794]	lipid A biosynthesis	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12101]	Sample type/isolated from	salt well
[Ref.: #12101]	Geographic location (country and/or sea, region)	Yunnan Province
[Ref.: #12101]	Country	China
[Ref.: #12101]	Country ISO 3 Code	CHN
[Ref.: #12101]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yunnan Province, south-west China
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From salt well
[Ref.: #67771]	Geographic location (country and/or sea, region)	Yunnan Province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Condition

#Saline

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU250489 (>99% sequence identity) for Thermobifida halotolerans subclade from Microbeatlas

Aquatic Samples	24
Soil Samples	156
Animal Samples	99
Plant Samples	17
Total Samples	296

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12101]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19891]	Biosafety level	1	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #12101]	Thermobifida halotolerans strain YIM 90462 16S ribosomal RNA gene, partial sequence	EU250489	1426	ENA	483545 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Thermobifida halotolerans DSM 44931	GCA_003574835	complete	GenBank	483545 tax ID
[Ref.: #67770]	Thermobifida halotolerans YIM 90462	GCA_001660385	scaffold	GenBank	483545 tax ID
[Ref.: #66792]	Thermobifida halotolerans strain DSM 44931	483545.5	wgs	PATRIC	483545 tax ID	*
[Ref.: #66792]	Thermobifida halotolerans strain YIM 90462	483545.3	wgs	PATRIC	483545 tax ID	*
[Ref.: #66792]	Thermobifida halotolerans DSM 44931	2806310643	draft	JGI IMG/M	483545 tax ID	*
[Ref.: #66792]	Thermobifida halotolerans YIM 90462	2839664203	draft	JGI IMG/M	483545 tax ID	*

[Ref.: #12101]	GC-content	69 mol%
[Ref.: #67770]	GC-content	69 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	71.2 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Thermobifida halotolerans YIM 90462 NCBI: GCA_001660385.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thermobifida halotolerans strain DSM 44931 PATRIC: 483545.5
[Ref.: #69480]	gram-positive	yes	90.399	yes
[Ref.: #69480]	anaerobic	no	98.801	yes
[Ref.: #69480]	halophile	no	59.991	no
[Ref.: #69480]	spore-forming	yes	91.411	no
[Ref.: #69480]	glucose-util	yes	83.036	no
[Ref.: #69480]	aerobic	yes	90.167	yes
[Ref.: #69480]	thermophile	no	95.191	no
[Ref.: #69480]	motile	no	93.849	no
[Ref.: #69480]	flagellated	no	98.221	no
[Ref.: #69480]	glucose-ferment	no	91.624	no

Availability in culture collections External links

[Ref.: #12101]

Culture collection no.

DSM 44931, JCM 16012, KCTC 19123, YIM 90462

[Ref.: #80494]

SI-ID 297454

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Pathogenicity	Bioremediation of lindane contaminated soil: Exploring the potential of actinobacterial strains.	Usmani Z, Kulp M, Lukk T	Chemosphere	10.1016/j.chemosphere.2021.130468	2021	*
Enzymology	Expression and characterisation of a pH and salt tolerant, thermostable and xylose tolerant recombinant GH43 beta-xylosidase from Thermobifida halotolerans YIM 90462(T) for promoting hemicellulose degradation.	Yin YR, Xian WD, Han MX, Zhou EM, Liu L, Alkhalifah DHM, Hozzein WN, Xiao M, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-018-1161-2	2018	*
Enzymology	Heterologous expression and characterization of a novel halotolerant, thermostable, and alkali-stable GH6 endoglucanase from Thermobifida halotolerans.	Yin YR, Zhang F, Hu QW, Xian WD, Hozzein WN, Zhou EM, Ming H, Nie GX, Li WJ	Biotechnol Lett	10.1007/s10529-014-1742-8	2014	*
Phylogeny	Allonocardiopsis opalescens gen. nov., sp. nov., a new member of the suborder Streptosporangineae, from the surface-sterilized fruit of a medicinal plant.	Du HJ, Zhang YQ, Liu HY, Su J, Wei YZ, Ma BP, Guo BL, Yu LY	Int J Syst Evol Microbiol	10.1099/ijs.0.041491-0	2012	*
Enzymology	Cloning, expression, and characterization of an alkaline thermostable GH11 xylanase from Thermobifida halotolerans YIM 90462T.	Zhang F, Chen JJ, Ren WZ, Lin LB, Zhou Y, Zhi XY, Tang SK, Li WJ	J Ind Microbiol Biotechnol	10.1007/s10295-012-1119-8	2012	*
Enzymology	Cloning, expression and characterization of an alkaline thermostable GH9 endoglucanase from Thermobifida halotolerans YIM 90462 T.	Zhang F, Chen JJ, Ren WZ, Nie GX, Ming H, Tang SK, Li WJ	Bioresour Technol	10.1016/j.biortech.2011.08.019	2011	*
Phylogeny	Spinactinospora alkalitolerans gen. nov., sp. nov., an actinomycete isolated from marine sediment.	Chang X, Liu W, Zhang XH	Int J Syst Evol Microbiol	10.1099/ijs.0.027383-0	2011	*
Phylogeny	Thermobifida halotolerans sp. nov., isolated from a salt mine sample, and emended description of the genus Thermobifida.	Yang LL, Tang SK, Zhang YQ, Zhi XY, Wang D, Xu LH, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.65732-0	2008	*
Enzymology	Cloning, expression and characterization of a novel GH5 exo/endoglucanase of Thermobi fi da halotolerans YIM 90462(T) by genome mining.	Zhang F, Zhang XM, Yin YR, Li WJ	J Biosci Bioeng	10.1016/j.jbiosc.2015.04.012	2015	*

References

#12101

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44931

#19891

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#80494

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID297454.1 )

* These data were automatically processed and therefore are not curated

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Search for species Thermobifida halotolerans in external resources:
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Thermobifida halotolerans YIM 90462

Thermobifida halotolerans strain DSM 44931

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