Aeromicrobium marinum T2 is an obligate aerobe, mesophilic, Gram-positive prokaryote that was isolated from surface water.
Gram-positive rod-shaped obligate aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Propionibacteriales |
| Family Nocardioidaceae |
| Genus Aeromicrobium |
| Species Aeromicrobium marinum |
| Full scientific name Aeromicrobium marinum Bruns et al. 2003 |
| @ref: | 5788 |
| multimedia content: | DSM_15272.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_15272.jpg |
| caption: | Medium 514 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 5788 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | Medium recipe at MediaDive | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water | ||
| 37418 | Marine agar (MA) | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) | |||
| 120808 | CIP Medium 13 | Medium recipe at CIP |
| 67770 | Observationquinones: MK-9(H4) |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 120808 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 120808 | amylase | - | ||
| 120808 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 120808 | caseinase | - | 3.4.21.50 | |
| 120808 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 120808 | gamma-glutamyltransferase | - | 2.3.2.2 | |
| 120808 | gelatinase | - | ||
| 120808 | lecithinase | + | ||
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 120808 | lipase | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 120808 | lysine decarboxylase | - | 4.1.1.18 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 120808 | ornithine decarboxylase | - | 4.1.1.17 | |
| 120808 | oxidase | - | ||
| 120808 | phenylalanine ammonia-lyase | - | 4.3.1.24 | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 120808 | tryptophan deaminase | - | ||
| 120808 | tween esterase | + | ||
| 120808 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | octane oxidation | 100 | 3 of 3 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | phenylmercury acetate degradation | 100 | 2 of 2 | ||
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | valine metabolism | 88.89 | 8 of 9 | ||
| 66794 | citric acid cycle | 85.71 | 12 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | glutamate and glutamine metabolism | 82.14 | 23 of 28 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | factor 420 biosynthesis | 80 | 4 of 5 | ||
| 66794 | ethylmalonyl-CoA pathway | 80 | 4 of 5 | ||
| 66794 | flavin biosynthesis | 80 | 12 of 15 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | phenylacetate degradation (aerobic) | 80 | 4 of 5 | ||
| 66794 | alanine metabolism | 79.31 | 23 of 29 | ||
| 66794 | heme metabolism | 78.57 | 11 of 14 | ||
| 66794 | molybdenum cofactor biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | palmitate biosynthesis | 77.27 | 17 of 22 | ||
| 66794 | leucine metabolism | 76.92 | 10 of 13 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | C4 and CAM-carbon fixation | 75 | 6 of 8 | ||
| 66794 | acetate fermentation | 75 | 3 of 4 | ||
| 66794 | purine metabolism | 74.47 | 70 of 94 | ||
| 66794 | NAD metabolism | 72.22 | 13 of 18 | ||
| 66794 | propanol degradation | 71.43 | 5 of 7 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | pyrimidine metabolism | 71.11 | 32 of 45 | ||
| 66794 | propionate fermentation | 70 | 7 of 10 | ||
| 66794 | threonine metabolism | 70 | 7 of 10 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | ||
| 66794 | methane metabolism | 66.67 | 2 of 3 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | IAA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 66.67 | 6 of 9 | ||
| 66794 | glycolysis | 64.71 | 11 of 17 | ||
| 66794 | tetrahydrofolate metabolism | 64.29 | 9 of 14 | ||
| 66794 | lysine metabolism | 64.29 | 27 of 42 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | isoleucine metabolism | 62.5 | 5 of 8 | ||
| 66794 | urea cycle | 61.54 | 8 of 13 | ||
| 66794 | oxidative phosphorylation | 61.54 | 56 of 91 | ||
| 66794 | lipid metabolism | 61.29 | 19 of 31 | ||
| 66794 | cysteine metabolism | 61.11 | 11 of 18 | ||
| 66794 | tryptophan metabolism | 60.53 | 23 of 38 | ||
| 66794 | glycine betaine biosynthesis | 60 | 3 of 5 | ||
| 66794 | Entner Doudoroff pathway | 60 | 6 of 10 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 58.82 | 10 of 17 | ||
| 66794 | non-pathway related | 57.89 | 22 of 38 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | glutathione metabolism | 57.14 | 8 of 14 | ||
| 66794 | androgen and estrogen metabolism | 56.25 | 9 of 16 | ||
| 66794 | degradation of sugar alcohols | 56.25 | 9 of 16 | ||
| 66794 | nitrate assimilation | 55.56 | 5 of 9 | ||
| 66794 | histidine metabolism | 55.17 | 16 of 29 | ||
| 66794 | metabolism of disaccharids | 54.55 | 6 of 11 | ||
| 66794 | arginine metabolism | 54.17 | 13 of 24 | ||
| 66794 | isoprenoid biosynthesis | 53.85 | 14 of 26 | ||
| 66794 | methionine metabolism | 53.85 | 14 of 26 | ||
| 66794 | CMP-KDO biosynthesis | 50 | 2 of 4 | ||
| 66794 | dTDPLrhamnose biosynthesis | 50 | 4 of 8 | ||
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | glycolate and glyoxylate degradation | 50 | 3 of 6 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | cyclohexanol degradation | 50 | 2 of 4 | ||
| 66794 | toluene degradation | 50 | 2 of 4 | ||
| 66794 | ketogluconate metabolism | 50 | 4 of 8 | ||
| 66794 | cis-vaccenate biosynthesis | 50 | 1 of 2 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | phenol degradation | 50 | 10 of 20 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | vitamin E metabolism | 50 | 2 of 4 | ||
| 66794 | 3-phenylpropionate degradation | 46.67 | 7 of 15 | ||
| 66794 | cholesterol biosynthesis | 45.45 | 5 of 11 | ||
| 66794 | proline metabolism | 45.45 | 5 of 11 | ||
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | benzoyl-CoA degradation | 42.86 | 3 of 7 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | glycogen metabolism | 40 | 2 of 5 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 40 | 4 of 10 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | 3-chlorocatechol degradation | 40 | 2 of 5 | ||
| 66794 | gallate degradation | 40 | 2 of 5 | ||
| 66794 | carnitine metabolism | 37.5 | 3 of 8 | ||
| 66794 | d-xylose degradation | 36.36 | 4 of 11 | ||
| 66794 | tyrosine metabolism | 35.71 | 5 of 14 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | selenocysteine biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | pantothenate biosynthesis | 33.33 | 2 of 6 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | ||
| 66794 | arachidonic acid metabolism | 33.33 | 6 of 18 | ||
| 66794 | vitamin B12 metabolism | 32.35 | 11 of 34 | ||
| 66794 | ascorbate metabolism | 31.82 | 7 of 22 | ||
| 66794 | sulfate reduction | 30.77 | 4 of 13 | ||
| 66794 | vitamin B1 metabolism | 30.77 | 4 of 13 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 30.77 | 4 of 13 | ||
| 66794 | coenzyme M biosynthesis | 30 | 3 of 10 | ||
| 66794 | myo-inositol biosynthesis | 30 | 3 of 10 | ||
| 66794 | degradation of hexoses | 27.78 | 5 of 18 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | glycogen biosynthesis | 25 | 1 of 4 | ||
| 66794 | degradation of pentoses | 25 | 7 of 28 | ||
| 66794 | phenylpropanoid biosynthesis | 23.08 | 3 of 13 | ||
| 66794 | carotenoid biosynthesis | 22.73 | 5 of 22 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 |
Global distribution of 16S sequence AY166703 (>99% sequence identity) for Aeromicrobium marinum from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM16077v2 assembly for Aeromicrobium marinum DSM 15272 | chromosome | 585531 | 78.81 | ||||
| 66792 | Aeromicrobium marinum DSM 15272 | contig | 585531 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 5788 | Aeromicrobium marinum DSM 15272 strain T2 16S ribosomal RNA gene, partial sequence | AY166703 | 1357 | 585531 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 70.40 | no |
| 125439 | motility | BacteriaNetⓘ | no | 70.10 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 99.40 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 99.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 92.69 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 97.23 | no |
| 125438 | aerobic | aerobicⓘ | yes | 84.65 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 72.10 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 95.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genome Sequence of Aeromicrobium erythreum NRRL B-3381, an Erythromycin-Producing Bacterium of the Nocardioidaceae. | Harrell EA, Miller ES. | Genome Announc | 10.1128/genomea.00300-16 | 2016 | ||
| An Integrated Approach to Recognize Potential Protective Effects of Culinary Herbs Against Chronic Diseases. | Chandrababu S, Bastola D. | J Healthc Inform Res | 10.1007/s41666-018-0041-x | 2019 | ||
| Enzymology | Rhodococcus sp. strain CR-53 LipR, the first member of a new bacterial lipase family (family X) displaying an unusual Y-type oxyanion hole, similar to the Candida antarctica lipase clan. | Bassegoda A, Pastor FI, Diaz P. | Appl Environ Microbiol | 10.1128/aem.06332-11 | 2012 | |
| Diverse alkane hydroxylase genes in microorganisms and environments. | Nie Y, Chi CQ, Fang H, Liang JL, Lu SL, Lai GL, Tang YQ, Wu XL. | Sci Rep | 10.1038/srep04968 | 2014 | ||
| Salix purpurea Stimulates the Expression of Specific Bacterial Xenobiotic Degradation Genes in a Soil Contaminated with Hydrocarbons. | Page AP, Yergeau E, Greer CW. | PLoS One | 10.1371/journal.pone.0132062 | 2015 | ||
| Genetics | Characterization of the genome of the polyvalent lytic bacteriophage GTE2, which has potential for biocontrol of Gordonia-, Rhodococcus-, and Nocardia-stabilized foams in activated sludge plants. | Petrovski S, Seviour RJ, Tillett D. | Appl Environ Microbiol | 10.1128/aem.00025-11 | 2011 | |
| Genomics of sponge-associated Streptomyces spp. closely related to Streptomyces albus J1074: insights into marine adaptation and secondary metabolite biosynthesis potential. | Ian E, Malko DB, Sekurova ON, Bredholt H, Ruckert C, Borisova ME, Albersmeier A, Kalinowski J, Gelfand MS, Zotchev SB. | PLoS One | 10.1371/journal.pone.0096719 | 2014 | ||
| Metabolism | Are there acyl-homoserine lactones within mammalian intestines? | Swearingen MC, Sabag-Daigle A, Ahmer BM. | J Bacteriol | 10.1128/jb.01341-12 | 2013 | |
| Metabolism | Multiplicity of 3-Ketosteroid-9alpha-Hydroxylase enzymes in Rhodococcus rhodochrous DSM43269 for specific degradation of different classes of steroids. | Petrusma M, Hessels G, Dijkhuizen L, van der Geize R. | J Bacteriol | 10.1128/jb.00274-11 | 2011 | |
| Genetics | Anthropogenic and natural disturbances along a river and its estuary alter the diversity of pathogens and antibiotic resistance mechanisms. | Rubin-Blum M, Harbuzov Z, Cohen R, Astrahan P. | Sci Total Environ | 10.1016/j.scitotenv.2023.164108 | 2023 | |
| Metabolism | Discovery of Two Native Baeyer-Villiger Monooxygenases for Asymmetric Synthesis of Bulky Chiral Sulfoxides. | Zhang Y, Liu F, Xu N, Wu YQ, Zheng YC, Zhao Q, Lin G, Yu HL, Xu JH. | Appl Environ Microbiol | 10.1128/aem.00638-18 | 2018 | |
| Metabolism | A Data-Driven Approach to Enhance the Prediction of Bacteria-Metabolite Interactions in the Human Gut Microbiome Using Enzyme Encodings and Metabolite Structural Embeddings. | Srivastava G, Brylinski M. | Nutrients | 10.3390/nu17030469 | 2025 | |
| Genetics | Complete Genome Sequence and Function Gene Identify of Prometryne-Degrading Strain Pseudomonas sp. DY-1. | Liang D, Xiao C, Song F, Li H, Liu R, Gao J. | Microorganisms | 10.3390/microorganisms9061261 | 2021 | |
| Diversity of alkane hydroxylase genes on the rhizoplane of grasses planted in petroleum-contaminated soils. | Tsuboi S, Yamamura S, Nakajima-Kambe T, Iwasaki K. | Springerplus | 10.1186/s40064-015-1312-0 | 2015 | ||
| Application of a bioinformatic pipeline to RNA-seq data identifies novel virus-like sequence in human blood. | Melnick M, Gonzales P, LaRocca TJ, Song Y, Wuu J, Benatar M, Oskarsson B, Petrucelli L, Dowell RD, Link CD, Prudencio M. | G3 (Bethesda) | 10.1093/g3journal/jkab141 | 2021 | ||
| Genetics | Lysis to Kill: Evaluation of the Lytic Abilities, and Genomics of Nine Bacteriophages Infective for Gordonia spp. and Their Potential Use in Activated Sludge Foam Biocontrol. | Dyson ZA, Tucci J, Seviour RJ, Petrovski S. | PLoS One | 10.1371/journal.pone.0134512 | 2015 | |
| Light Modulates the Physiology of Nonphototrophic Actinobacteria. | Maresca JA, Keffer JL, Hempel PP, Polson SW, Shevchenko O, Bhavsar J, Powell D, Miller KJ, Singh A, Hahn MW. | J Bacteriol | 10.1128/jb.00740-18 | 2019 | ||
| Genetics | Comparative genomics reveals evidence of marine adaptation in Salinispora species. | Penn K, Jensen PR. | BMC Genomics | 10.1186/1471-2164-13-86 | 2012 | |
| Genetics | Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin. | Boxberger M, Ben Khedher M, Magnien S, Cassir N, La Scola B. | New Microbes New Infect | 10.1016/j.nmni.2020.100809 | 2020 | |
| Phylogeny | Aeromicrobium ponti sp. nov., isolated from seawater. | Lee DW, Lee SD. | Int J Syst Evol Microbiol | 10.1099/ijs.0.65575-0 | 2008 | |
| Phylogeny | Aeromicrobium tamlense sp. nov., isolated from dried seaweed. | Lee SD, Kim SJ. | Int J Syst Evol Microbiol | 10.1099/ijs.0.64442-0 | 2007 | |
| Phylogeny | Aeromicrobium panaciterrae sp. nov., isolated from soil of a ginseng field in South Korea. | Cui YS, Im WT, Yin CR, Lee JS, Lee KC, Lee ST. | Int J Syst Evol Microbiol | 10.1099/ijs.0.64697-0 | 2007 | |
| Phylogeny | Aeromicrobium marinum sp. nov., an abundant pelagic bacterium isolated from the German Wadden Sea. | Bruns A, Philipp H, Cypionka H, Brinkhoff T | Int J Syst Evol Microbiol | 10.1099/ijs.0.02735-0 | 2003 |
| #5788 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15272 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #37418 | ; Curators of the CIP; |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #120808 | Collection of Institut Pasteur ; Curators of the CIP; CIP 108216 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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