Nocardia transvalensis (DSM 43405, ATCC 6865, DSM 43582)

Name: Nocardia transvalensis (DSM 43405, ATCC 6865, DSM 43582)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10717

Type strain

Strain Designation 3426, 16, strain 16

Culture col. no. DSM 43405 ATCC 6865 DSM 43582 IFO 15921 IMRU 3426 14 more

NCBI tax ID(s) 1206744 37333

Special Collections DSMZ CCUG JCM CIP Wink compendium

Links

Nocardia transvalensis 3426 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from mycetoma pedis.

Gram-positive rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 92785

ATCC 6865,NCTC 2392,CIP 104841,CCM 2776,DSM 43405,IMET 7500,JCM 9099,VKM Ac-867,DSM 43582,IFO 15921,NRRL B-16037,CCUG 45937,NBRC 15921,CGMCC 4.1169

@ref 20215

Last LPSN update 2025-12-16 09:49:24

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Nocardiaceae

Genus Nocardia

Species Nocardia transvalensis

Full scientific name Nocardia transvalensis Pijper and Pullinger 1927 (Approved Lists 1980)

BacDive ID	Other strains from **Nocardia transvalensis** (4)	Type strain
10718	N. transvalensis DSM 46068, CIP 766, IMET 7499, IMRU 1583, ...
136349	N. transvalensis 193, Jr 366, A-0319, CIP 104829, IFM 0203, ...
161204	N. transvalensis JCM 12242, IFM 10065
161640	N. transvalensis JCM 15839, IFM 0035

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
123575	positive	rod-shaped
125439	positive			98.3

Colony morphology

@ref	Incubation period
56994	1 day
123575

Multimedia

@ref:	10679
multimedia content:	DSM_43405.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_43405.jpg
caption:	Medium 65 37°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
10679	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10679	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
41335	MEDIUM 129 - for Pseudonocardia, Nocardia, Skermania and Streptomyces seoulensis, Streptomyces stramineus		Distilled water make up to (1000.000 ml);Agar (20.000 g);Glucose (10.000g);Yeast extract (1.000 g);Beef extract (1.000 g);Casamino acids (2.000 g)
123575	CIP Medium 129	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
10679	positive	growth	37	mesophilic
18492	positive	optimum	37	mesophilic
41335	positive	growth	30	mesophilic
56994	positive	growth	30-37	mesophilic
67770	positive	growth	28	mesophilic
123575	negative	growth	41
123575	negative	growth	10
123575	negative	growth	5
123575	positive	growth	25-37	mesophilic
123575	negative	growth	45

Culture pH

@ref	Ability	Type	PH
18492	positive	maximum	8
18492	positive	minimum	5

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
56994	aerobe
123575	obligate aerobe
125438	aerobe	91.029
125439	obligate aerobe	99.1

Halophily

@ref	Salt	Growth	Tested relation	Concentration
18492	NaCl	positive	maximum	2.5 %
123575	NaCl	positive	growth	0-4 %
123575	NaCl		growth	6 %
123575	NaCl		growth	8 %
123575	NaCl		growth	10 %

Observation

67770

Observationquinones: MK-8(H₄), MK-8(II,III-H₄, ω-cycl)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
18492	22599 ChEBI	arabinose	-
68368	29016 ChEBI	arginine	-	hydrolysis	from API 20E
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
18492	62968 ChEBI	cellulose	-
123575	16947 ChEBI	citrate	-	carbon source
68368	16947 ChEBI	citrate	+	assimilation	from API 20E
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68379	17634 ChEBI	D-glucose	-	fermentation	from API Coryne
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
123575	4853 ChEBI	esculin	+	hydrolysis
18492	28757 ChEBI	fructose	+
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68368	5291 ChEBI	gelatin	-	hydrolysis	from API 20E
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
18492	17234 ChEBI	glucose	-
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68368	25094 ChEBI	lysine	-	degradation	from API 20E
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
18492	29864 ChEBI	mannitol	+
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
18492	17268 ChEBI	myo-inositol	+
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68379	17632 ChEBI	nitrate	+	reduction	from API Coryne
123575	17632 ChEBI	nitrate	+	reduction
123575	17632 ChEBI	nitrate	-	respiration
123575	16301 ChEBI	nitrite	-	reduction
68368	18257 ChEBI	ornithine	-	degradation	from API 20E
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
18492	16634 ChEBI	raffinose	-
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
18492	26546 ChEBI	rhamnose	+
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
18492	17992 ChEBI	sucrose	-
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68368	27897 ChEBI	tryptophan	-	energy source	from API 20E
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
68368	16199 ChEBI	urea	+	hydrolysis	from API 20E
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid
18492	18222 ChEBI	xylose	-

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
123575	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite
68368	15688 ChEBI	acetoin	from API 20E
68368	16136 ChEBI	hydrogen sulfide	from API 20E
123575	35581 ChEBI	indole
68368	35581 ChEBI	indole	from API 20E

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test	Indole test
123575	15688 ChEBI	acetoin	-
68368	15688 ChEBI	acetoin	-			from API 20E
123575	17234 ChEBI	glucose		-
68368	35581 ChEBI	indole			-	from API 20E

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
123575	alcohol dehydrogenase	-	1.1.1.1
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
123575	amylase	-
68368	arginine dihydrolase	-	3.5.3.6	from API 20E
68382	beta-galactosidase	-	3.2.1.23	from API zym
123575	beta-galactosidase	+	3.2.1.23
68368	beta-galactosidase	-	3.2.1.23	from API 20E
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
123575	caseinase	-	3.4.21.50
123575	catalase	+	1.11.1.6
68379	catalase	-	1.11.1.6	from API Coryne
68382	cystine arylamidase	-	3.4.11.3	from API zym
123575	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
123575	gelatinase	-
68379	gelatinase	-		from API Coryne
68368	gelatinase	-		from API 20E
123575	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
123575	lipase	-
68382	lipase (C 14)	-		from API zym
123575	lysine decarboxylase	-	4.1.1.18
68368	lysine decarboxylase	-	4.1.1.18	from API 20E
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123575	ornithine decarboxylase	-	4.1.1.17
68368	ornithine decarboxylase	-	4.1.1.17	from API 20E
123575	oxidase	-
123575	phenylalanine ammonia-lyase	-	4.3.1.24
123575	protease	-
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
123575	tryptophan deaminase	-
68368	tryptophan deaminase	-	4.1.99.1	from API 20E
123575	tween esterase	-
123575	urease	+	3.5.1.5
68379	urease	-	3.5.1.5	from API Coryne
68368	urease	+	3.5.1.5	from API 20E
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

56994

Fatty acid	Percentage	ECL
C16:0	43.4	16
TBSA 10Me18:0	24.5	18.392
C18:1 ω9c	11.4	17.769
C16:1 ω7c/C15:0 ISO 2OH	7.5	15.85
C18:2 ω6,9c/C18:0 ANTE	5.3	17.724
C18:0	3.7	18
C16:1 ω7c	2.2	15.819
C20:1 ω9c	1.2	19.77
C14:0	0.8	14

API 20E

@ref	ONPG	ADH (Arg)	LDC (Lys)	ODC	CIT	H2S productionH2S	URE	TDA (Trp)	IND	Acetoin production (Voges Proskauer test)VP	GEL	GLU	MAN	INO	Sor	RHA	SAC	MEL	AMY	ARA	OX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	OF-O	OF-F
18492	-	-	-	-	+	-	+	-	-	-	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
10679	+	-	-	-	-	+/-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123575	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
123575	not determinedn.d.	-	-	-	-	+/-	-	-	+/-	-	+/-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	+/-	+/-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
123575	not determinedn.d.	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	+	+	-	-	-	+	+	+	-	-	+	+	-	-	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	+	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Disease	-
#Host Body-Site	#Limb	#Foot

Isolation

@ref	Sample type
10679	mycetoma pedis
56994	Human,mycetoma of foot
67770	Mycetoma of foot
123575	Human, Mycetoma of foot

Taxonmaps

69479

Global distribution of 16S sequence X80609 (>99% sequence identity) for Nocardia transvalensis from Microbeatlas

Aquatic Samples	1
Soil Samples	30
Animal Samples	8
Plant Samples	11
Total Samples	50

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18492	2	German classification According to TRBA 466
10679	2	Risk group (German classification) According to TRBA 466
123575	2	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1420331v1 assembly for Nocardia transvalensis DSM 43582	contig	GCA_014203315	37333.3	2863047402	37333	76.73
67770	ASM30887v1 assembly for Nocardia transvalensis NBRC 15921	contig	GCA_000308875	1206744.4	2551306177	1206744	51.44

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Nocardia transvalensis strain ATCC 6865 16S ribosomal RNA gene, partial sequence	DQ659916	1388	37333
20218	Nocardia transvalensis 16S rRNA gene, strain ATCC 6865T	X80598	1394	37333
20218	Nocardia transvalensis strain CGMCC 4.1169 16S-23S ribosomal RNA intergenic spacer, complete sequence	DQ518346	331	37333
20218	Nocardia transvalensis strain DSM 43405 16S ribosomal RNA gene, complete sequence	AF430047	1494	37333
20218	Nocardia transvalensis strain DSM 43405 note copy 1 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536485	327	37333
20218	Nocardia transvalensis strain DSM 43405 note copy 2 16S-23S ribosomal RNA intergenic spacer, complete sequence	AF536486	327	37333
20218	Nocardia transvalensis culture-collection CDC:W7518 16S ribosomal RNA gene, partial sequence	GQ217496	1441	37333
20218	Nocardia transvalensis 16S rRNA gene, strain DSM43405T	X80609	1472	37333
20218	N.transvalensis gene for 16S ribosomal RNA	Z36926	1474	37333
20218	Nocardia transvalensis strain NRRL B-16037 16S ribosomal RNA gene, partial sequence	JN041523	462	37333

GC content

@ref	GC-content (mol%)	Method
67770	69.2	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Nocardia transvalensis DSM 43582
NCBI: GCA_014203315

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.10	no
125439	gram_stain	BacteriaNetⓘ	positive	98.30	no
125439	motility	BacteriaNetⓘ	no	84.60	no
125439	spore_formation	BacteriaNetⓘ	yes	80.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Nocardia transvalensis NBRC 15921
PATRIC: 1206744.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.73	no
125438	anaerobic	anaerobicⓘ	no	97.11	yes
125438	spore-forming	spore-formingⓘ	yes	64.07	no
125438	aerobic	aerobicⓘ	yes	91.03	yes
125438	thermophilic	thermophileⓘ	no	96.00	no
125438	flagellated	motile2+ⓘ	no	85.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	A persistent and diverse airway microbiota present during chronic obstructive pulmonary disease exacerbations.	Huang YJ, Kim E, Cox MJ, Brodie EL, Brown R, Wiener-Kronish JP, Lynch SV.	OMICS	10.1089/omi.2009.0100	2010
Phylogeny	Recognition of a Nocardia transvalensis complex by resistance to aminoglycosides, including amikacin, and PCR-restriction fragment length polymorphism analysis.	Wilson RW, Steingrube VA, Brown BA, Blacklock Z, Jost KC, McNabb A, Colby WD, Biehle JR, Gibson JL, Wallace RJ.	J Clin Microbiol	10.1128/jcm.35.9.2235-2242.1997	1997
	Rapid PCR Detection of Mycoplasma hominis, Ureaplasma urealyticum, and Ureaplasma parvum.	Cunningham SA, Mandrekar JN, Rosenblatt JE, Patel R.	Int J Bacteriol	10.1155/2013/168742	2013
Enzymology	Evaluation of the integrated database network system (IDNS) SmartGene software for analysis of 16S rRNA gene sequences for identification of Nocardia species.	Conville PS, Murray PR, Zelazny AM.	J Clin Microbiol	10.1128/jcm.00681-10	2010
Enzymology	Rapid identification of clinically relevant Nocardia species to genus level by 16S rRNA gene PCR.	Laurent FJ, Provost F, Boiron P.	J Clin Microbiol	10.1128/jcm.37.1.99-102.1999	1999
Enzymology	Sequence-based identification of aerobic actinomycetes.	Patel JB, Wallace RJ, Brown-Elliott BA, Taylor T, Imperatrice C, Leonard DG, Wilson RW, Mann L, Jost KC, Nachamkin I.	J Clin Microbiol	10.1128/jcm.42.6.2530-2540.2004	2004
Enzymology	Group-specific small-subunit rRNA hybridization probes to characterize filamentous foaming in activated sludge systems.	de los Reyes FL, Ritter W, Raskin L.	Appl Environ Microbiol	10.1128/aem.63.3.1107-1117.1997	1997
Genetics	Comparative Genomics and Metabolomics in the Genus Nocardia.	Mannle D, McKinnie SMK, Mantri SS, Steinke K, Lu Z, Moore BS, Ziemert N, Kaysser L.	mSystems	10.1128/msystems.00125-20	2020
	A Rare Case of Disseminated Nocardia transvalensis in an Immunocompetent Host.	Ragunanthan B, Wunderly K, Kleshinski J, Hollingshead C.	Infect Dis Rep	10.3390/idr17060140	2025
	Comments on "Disseminated Nocardia transvalensis complex and farcinica: First case in an immunocompetent".	Abavisani M, Rouhani J, Keikha M.	New Microbes New Infect	10.1016/j.nmni.2023.101176	2023
	Two novel bacteriophages isolated from the environment that can help control activated sludge foaming.	Xiong W, Liu B, Lu H, Liu X.	Folia Microbiol (Praha)	10.1007/s12223-024-01145-4	2024
	First Documented Case of Pneumonia with Nocardia africana and SARS-CoV-2 Co-Detection in Mainland China.	Yu X, Cheng J, He J, Wu X, Wang W, Chen M, Zhuo B, Ge Y.	Infect Drug Resist	10.2147/idr.s551164	2025
	Disseminated Nocardia transvalensis complex and farcinica: First case in an immunocompetent.	Diallo A, Dembele Y, Yaya I, Niang M, Benoit-Cattin T, Meliani P, Permal S.	New Microbes New Infect	10.1016/j.nmni.2023.101148	2023
	Pulmonary nocardiosis with hilar mass misdiagnosed as lung cancer: A case report.	Liu Q, Li Q, Liu B, Fu T.	Medicine (Baltimore)	10.1097/md.0000000000042524	2025
	Predicting valuable missense variants with AlphaMissense in a multiple pulmonary infection patient.	Wang T, Ma J, Shu Y, Hong B, Wang Z, Lu Y, Yu X, Huang X, Zhang Y.	Clin Case Rep	10.1002/ccr3.8453	2024
	First Case of Nocardia wallacei From India: A Case Report and Literature Review.	Ranjan R, Gunasekaran J, Bir R, Kumar U, Gupta RM.	Cureus	10.7759/cureus.53035	2024
	Nocardia wallacei: A rare cause of actinomycetoma in an immunocompetent patient.	Chieosilapatham P, Duangsonk K, Kaweewan I, Tongjai S, Kanthawang T.	Eur J Microbiol Immunol (Bp)	10.1556/1886.2024.00110	2024
Genetics	Isolation and characterization of bacteriophage NTR1 infectious for Nocardia transvalensis and other Nocardia species.	Taylor S, Brown TL, Tucci J, Lock P, Seviour RJ, Petrovski S.	Virus Genes	10.1007/s11262-018-1625-5	2019
Enzymology	A Rare Case of Drug-Resistant Nocardia transvalensis Infection in a Renal Transplant Patient.	Kapoor R, Adapa S, Vakiti A, Gani IY, Mulloy L, Padala SA.	J Investig Med High Impact Case Rep	10.1177/2324709620909243	2020
	Disseminated Nocardia infection-A rare presentation.	Arora H, Ramalingam S, Sanghavi R, Balogun A, Muruganandam M.	Clin Case Rep	10.1002/ccr3.4673	2021
	Evaluating the clinical utility of Aspergillus, Mucorales, and Nocardia bronchoalveolar PCRs for the diagnosis of invasive pulmonary infections in patients with hematological malignancies.	Gali V, Al-Ghanamah R, Finnigan K, Kalchiem-Dekel O, Kamboj M, Hohl TM, Babady NE, Papanicolaou GA, Lee YJ.	J Clin Microbiol	10.1128/jcm.01355-24	2025
Pathogenicity	Isolation and Complete Genome Sequencing of NS-I, a Lytic Bacteriophage Infecting Fish Pathogenic Strains of Nocardia seriolae.	Akmal M, Araki K, Nishiki I, Yoshida T.	Phage (New Rochelle)	10.1089/phage.2023.0019	2023
	A Case of Nocardia africana-Related Keratitis.	Chaidaroon W, Sawetwong P, Manochomphu S.	Case Rep Ophthalmol	10.1159/000533906	2023
	Clinical features and outcomes of persons with cystic fibrosis and nocardia isolation: a systematic review.	Terlizzi V, Ballerini T, Castaldo A, Dolce D, Campana S, Taccetti G, Chiappini E.	BMC Pulm Med	10.1186/s12890-024-03217-0	2024
Phylogeny	Comparison of restriction enzyme pattern analysis and full gene sequencing of 16S rRNA gene for Nocardia species identification, the first report of Nocardia transvalensis isolated of sputum from Iran, and review of the literature.	Fatahi-Bafghi M, Heidarieh P, Rasouli-Nasab M, Habibnia S, Hashemi-Shahraki A, Eshraghi SS.	Antonie Van Leeuwenhoek	10.1007/s10482-016-0746-x	2016
Pathogenicity	Epidemiology and susceptibility to antimicrobial agents of the main Nocardia species in Spain.	Valdezate S, Garrido N, Carrasco G, Medina-Pascual MJ, Villalon P, Navarro AM, Saez-Nieto JA.	J Antimicrob Chemother	10.1093/jac/dkw489	2017
	Nocardia transvalensis Disseminated Infection in an Immunocompromised Patient with Idiopathic Thrombocytopenic Purpura.	Garcia-Mendez J, Carrillo-Casas EM, Rangel-Cordero A, Leyva-Leyva M, Xicohtencatl-Cortes J, Arenas R, Hernandez-Castro R.	Case Rep Infect Dis	10.1155/2016/3818969	2016
Pathogenicity	Retrospective Analysis of Antimicrobial Susceptibility Profiles of Nocardia Species from a Tertiary Hospital and Reference Laboratory, 2011 to 2017.	Hamdi AM, Fida M, Deml SM, Abu Saleh OM, Wengenack NL.	Antimicrob Agents Chemother	10.1128/aac.01868-19	2020
	Uncommon burn complication: skin nocardiosis.	Cases-Perera O, Aguilera-Saez J, Monte A, Rivas-Nicolls D, Andres-Collado A, Lopez-Masramon BM, Serracanta J.	Ann Burns Fire Disasters		2019
	Reporting of mycetoma cases from skin and soft tissue biopsies over a period of ten years: A single center report and literature review from Pakistan.	Zeeshan M, Fatima S, Farooqi J, Jabeen K, Ahmed A, Haq A, Arif MO, Zafar A.	PLoS Negl Trop Dis	10.1371/journal.pntd.0010607	2022
	Pulmonary nocardiosis in an immunocompetent patient with cystic fibrosis.	Schoen L, Santoro JD, Milla C, Bhargava S.	Case Rep Pulmonol	10.1155/2015/984171	2015
Enzymology	Nocardia transvalensis pulmonary infection in an immunocompetent patient with radiographic findings consistent with nontuberculous mycobacterial infections.	Wakamatsu K, Nagata N, Kumazoe H, Kajiki A, Kitahara Y.	J Infect Chemother	10.1007/s10156-011-0243-0	2011
Enzymology	Isolation of a rare Nocardia wallacei from an HIV-positive patient with pulmonary infection in Southern Saudi Arabia.	Hamid ME, Al Azraqi TA, Joseph MR, Al-Hakami AM.	Saudi Med J		2013
	A case of Nocardia transvalensis pneumonia in a 19-year-old cystic fibrosis patient.	Aravantagi A, Patra KP, Broussard M, Jones K.	Lung India	10.4103/0970-2113.99121	2012
	Concomitant pulmonary infection with Nocardia transvalensis and Aspergillus ustus in lung transplantation.	Cabada MM, Nishi SP, Lea AS, Schnadig V, Lombard GA, Lick SD, Valentine VG.	J Heart Lung Transplant	10.1016/j.healun.2010.04.016	2010
Phylogeny	Clinical significance, antimicrobial susceptibility and molecular identification of Nocardia species isolated from children with cystic fibrosis.	Betran A, Villuendas MC, Rezusta A, Pereira J, Revillo MJ, Rodriguez-Nava V.	Braz J Microbiol	10.1016/j.bjm.2016.01.029	2016
	Mycetoma (Madura Foot) in Israel: Recent Cases and a Systematic Review of the Literature.	Bitan O, Wiener-Well Y, Segal R, Schwartz E.	Am J Trop Med Hyg	10.4269/ajtmh.16-0710	2017
Enzymology	Nocardia transvalensis keratitis: an emerging pathology among travelers returning from Asia.	Trichet E, Cohen-Bacrie S, Conrath J, Drancourt M, Hoffart L.	BMC Infect Dis	10.1186/1471-2334-11-296	2011
	Aspergillus fumigatus endocarditis in an indigenous Australian male without classic risk factors.	Marinelli T, Kidd S, Shaw D, Rowe E.	Med Mycol Case Rep	10.1016/j.mmcr.2018.09.005	2018
	Post-traumatic endophthalmitis caused by Nocardia nova.	Rodriguez-Lozano J, Arminanzas Castillo C, Ruiz de Alegria Puig C, Ventosa Ayarza JA, Farinas MC, Aguero J, Calvo J.	JMM Case Rep	10.1099/jmmcr.0.005175	2019
	Pulmonary nocardiosis: A Single Center Study.	Oliveira Cabrita BM, Correia S, Jordao S, Correia de Abreu R, Alves V, Seabra B, Ferreira J.	Respir Med Case Rep	10.1016/j.rmcr.2020.101175	2020
	Nocardia transvalensis resistant to amikacin: an unusual cause of microbial keratitis.	Pandya VB, Petsoglou C.	Cornea	10.1097/ico.0b013e3181783a20	2008
	Nocardia transvalensis infection in an immunocompetent patient reported from Turkey.	Karakan Y, Elbek O, Uyar M, Zer Y, Tulu M, Dikensoy O.	Tuberk Toraks		2007
Pathogenicity	[Microbiological and clinical features of nine cases with nocardial infections].	Maki Y, Uchida Y, Monji N, Mochimaru T, Morokuma Y, Karashima T, Kiyosuke M, Fujise M, Eto F, Miyake N, Shimono N, Kayamori Y, Kang D.	Rinsho Byori		2011
	Coinfection by Nocardia beijingensis and Nocardia arthritidis in an immunocompromised patient diagnosed by endobronchial ultrasound guided transbronchial needle aspiration (EBUS-TBNA).	Aragaki-Nakahodo A, Benzaquen S, Kirschner M.	Respir Med Case Rep	10.1016/j.rmcr.2013.11.001	2014
	Transvalencin A, a thiazolidine zinc complex antibiotic produced by a clinical isolate of Nocardia transvalensis. II. Structure elucidation.	Hoshino Y, Mukai A, Yazawa K, Uno J, Ando A, Mikami Y, Fukai T, Ishikawa J, Yamaguchi K.	J Antibiot (Tokyo)	10.7164/antibiotics.57.803	2004
	Transvalencin A, a thiazolidine zinc complex antibiotic produced by a clinical isolate of Nocardia transvalensis. I. Taxonomy, fermentation, isolation and biological activities.	Hoshino Y, Mukai A, Yazawa K, Uno J, Ishikawa J, Ando A, Fukai T, Mikami Y.	J Antibiot (Tokyo)	10.7164/antibiotics.57.797	2004
	Microbial taxa in dust and excreta associated with the productive performance of commercial meat chicken flocks.	Bindari YR, Moore RJ, Van TTH, Walkden-Brown SW, Gerber PF.	Anim Microbiome	10.1186/s42523-021-00127-y	2021
	Nocardiosis with brain abscess due to an unusual species, Nocardia transvalensis.	Yorke RF, Rouah E.	Arch Pathol Lab Med	10.5858/2003-127-224-nwbadt	2003
Phylogeny	[Taxonomy and phylogenetic analysis of infectious Nocardia strains isolated from clinical samples].	Kageyama A, Mikami Y.	Nihon Ishinkin Gakkai Zasshi	10.3314/jjmm.48.73	2007
Enzymology	Disseminated nocardiosis due to unusual species: two case reports.	Alp E, Yildiz O, Aygen B, Sumerkan B, Sari I, Koc K, Couble A, Laurent F, Boiron P, Doganay M.	Scand J Infect Dis	10.1080/00365540500532860	2006
	Successful management of disseminated Nocardia transvalensis infection in a heart transplant recipient after development of sulfonamide resistance: case report and review.	Lopez FA, Johnson F, Novosad DM, Beaman BL, Holodniy M.	J Heart Lung Transplant	10.1016/s1053-2498(02)00663-0	2003
Phylogeny	Disseminated Nocardia transvalensis infection with osteomyelitis and multiple brain abscesses.	Montoya JP, Carpenter JL, Holmes GP, Hurley DL, Winn R.	Scand J Infect Dis	10.1080/0036554021000026959	2003
Phylogeny	Diversity and frequency of Nocardia spp. in the soil of Isfahan province, Iran.	Kachuei R, Emami M, Mirnejad R, Khoobdel M.	Asian Pac J Trop Biomed	10.1016/s2221-1691(12)60079-3	2012
	Clinical and microbiological features of nocardiosis 1997-2003.	Munoz J, Mirelis B, Aragon LM, Gutierrez N, Sanchez F, Espanol M, Esparcia O, Gurgui M, Domingo P, Coll P.	J Med Microbiol	10.1099/jmm.0.46774-0	2007
	Nocardial infections in Japan from 1992 to 2001, including the first report of infection by Nocardia transvalensis.	Kageyama A, Yazawa K, Ishikawa J, Hotta K, Nishimura K, Mikami Y.	Eur J Epidemiol	10.1023/b:ejep.0000024706.02325.c0	2004
	Identification and antimicrobial susceptibility profiles of Nocardia species clinically isolated in Japan.	Toyokawa M, Ohana N, Ueda A, Imai M, Tanno D, Honda M, Takano Y, Ohashi K, Saito K, Shimura H.	Sci Rep	10.1038/s41598-021-95870-2	2021
	Brain Abscesses Caused by Nocardia paucivorans in a Multiple Myeloma Patient Treated with Lenalidomide and Dexamethasone: a Case Report and Review of Literature.	Monticelli J, Luzzati R, Maurel C, Rosin C, Valentinotti R, Farina C.	Mediterr J Hematol Infect Dis	10.4084/mjhid.2015.011	2015
Enzymology	Disseminated infection due to Nocardia transvalensis coincident with Cryptococcus neoformans variety gattii meningitis.	Dyer JR, Ketheesan N, Norton RE, Ashhurst-Smith CI, Keary P, La Brooy JT.	Eur J Clin Microbiol Infect Dis	10.1007/s100960050352	1999
	Epidemiology and Antimicrobial Resistance Profiles of the Nocardia Species in China, 2009 to 2021.	Wang H, Zhu Y, Cui Q, Wu W, Li G, Chen D, Xiang L, Qu J, Shi D, Lu B.	Microbiol Spectr	10.1128/spectrum.01560-21	2022
Phylogeny	First case report of pulmonary nocardiosis caused by Nocardia mexicana.	Kuchibiro T, Ikeda T, Nakanishi H, Morishita Y, Houdai K, Ito J, Gonoi T.	JMM Case Rep	10.1099/jmmcr.0.005054	2016
Pathogenicity	Disseminated Nocardia transvalensis infection resembling pulmonary infarction in a liver transplant recipient.	Weinberger M, Eid A, Schreiber L, Shapiro M, Ilan Y, Libson E, Sacks T, Tur-Kaspa R.	Eur J Clin Microbiol Infect Dis	10.1007/bf02116527	1995
Enzymology	Demethyl mutactimycins, new anthracycline antibiotics from Nocardia and Streptomyces strains.	Speitling M, Nattewan P, Yazawa K, Mikami Y, Grun-Wollny I, Ritzau M, Laatsch H, Grafe U.	J Antibiot (Tokyo)	10.7164/antibiotics.51.693	1998
	Global burden of human mycetoma: a systematic review and meta-analysis.	van de Sande WW.	PLoS Negl Trop Dis	10.1371/journal.pntd.0002550	2013
	Primary lymphocutaneous nocardiosis caused by an unusual species of Nocardia: Nocardia transvalensis.	Schiff TA, Goldman R, Sanchez M, McNeil MM, Brown JM, Klirsfeld D, Moy J.	J Am Acad Dermatol	10.1016/0190-9622(93)70049-y	1993
	Infections due to Nocardia transvalensis: clinical spectrum and antimicrobial therapy.	McNeil MM, Brown JM, Georghiou PR, Allworth AM, Blacklock ZM.	Clin Infect Dis	10.1093/clind/15.3.453	1992
	Experimental actinomycetoma due to Nocardia transvalensis in laboratory mice.	Unaogu IC, Gugnani HC, Ikerionwu SE.	Mycoses	10.1111/myc.1990.33.2.99	1990
	Experimental infection of chickens with Nocardia asteroides and Nocardia transvalensis.	Okoye JO, Gugnani HC, Okeke CN.	Avian Pathol	10.1080/03079459108418737	1991
	Mycetoma caused by Nocardia transvalensis.	Mirza SH, Campbell C.	J Clin Pathol	10.1136/jcp.47.1.85	1994
Enzymology	Isolation, biochemical and molecular identification of Nocardia species among TB suspects in northeastern, Tanzania; a forgotten or neglected threat?	Hoza AS, Mfinanga SGS, Moser I, Konig B.	BMC Infect Dis	10.1186/s12879-017-2520-8	2017
Phylogeny	secA1 gene sequence polymorphisms for species identification of Nocardia species and recognition of intraspecies genetic diversity.	Kong F, Wang H, Zhang E, Sintchenko V, Xiao M, Sorrell TC, Chen X, Chen SC.	J Clin Microbiol	10.1128/jcm.01113-10	2010
	Hemoptysis and fever post-transplant: Diagnosis?	Romney MG.	Can J Infect Dis	10.1155/2000/108964	2000
	Pathogenicity of Nocardia transvalensis for laboratory mice.	Gugnani HC, Iboko IC, Ikerionwu SE.	Mycopathologia	10.1007/bf00436664	1986
Enzymology	Study on the pathogenicity of some Nocardia spp isolated from tap water of Ismailia City, Egypt.	Abdel-Monem MH, Dewedar A, Hussein M, Mansour S.	J Egypt Public Health Assoc		1991
	Nocardia-induced granulocyte macrophage colony-stimulating factor is neutralized by autoantibodies in disseminated/extrapulmonary nocardiosis.	Rosen LB, Rocha Pereira N, Figueiredo C, Fiske LC, Ressner RA, Hong JC, Gregg KS, Henry TL, Pak KJ, Baumgarten KL, Seoane L, Garcia-Diaz J, Olivier KN, Zelazny AM, Holland SM, Browne SK.	Clin Infect Dis	10.1093/cid/ciu968	2015
Enzymology	Rapid identification of clinically significant species and taxa of aerobic actinomycetes, including Actinomadura, Gordona, Nocardia, Rhodococcus, Streptomyces, and Tsukamurella isolates, by DNA amplification and restriction endonuclease analysis.	Steingrube VA, Wilson RW, Brown BA, Jost KC, Blacklock Z, Gibson JL, Wallace RJ.	J Clin Microbiol	10.1128/jcm.35.4.817-822.1997	1997
Phylogeny	Identification of pathogenic Nocardia species by reverse line blot hybridization targeting the 16S rRNA and 16S-23S rRNA gene spacer regions.	Xiao M, Kong F, Sorrell TC, Cao Y, Lee OC, Liu Y, Sintchenko V, Chen SC.	J Clin Microbiol	10.1128/jcm.01761-09	2010
Phylogeny	Assignment of reference 5'-end 16S rDNA sequences and species-specific sequence polymorphisms improves species identification of Nocardia.	Kong F, Chen SC, Chen X, Sintchenko V, Halliday C, Cai L, Tong Z, Lee OC, Sorrell TC.	Open Microbiol J	10.2174/1874285800903010097	2009
	Defining reference sequences for Nocardia species by similarity and clustering analyses of 16S rRNA gene sequence data.	Helal M, Kong F, Chen SC, Bain M, Christen R, Sintchenko V.	PLoS One	10.1371/journal.pone.0019517	2011
Enzymology	Use of PCR and reverse line blot hybridization macroarray based on 16S-23S rRNA gene internal transcribed spacer sequences for rapid identification of 34 mycobacterium species.	Xiong L, Kong F, Yang Y, Cheng J, Gilbert GL.	J Clin Microbiol	10.1128/jcm.00633-06	2006
Pathogenicity	Multisite reproducibility of the broth microdilution method for susceptibility testing of Nocardia species.	Conville PS, Brown-Elliott BA, Wallace RJ, Witebsky FG, Koziol D, Hall GS, Killian SB, Knapp CC, Warshauer D, Van T, Wengenack NL, Deml S, Woods GL.	J Clin Microbiol	10.1128/jcm.00994-11	2012
Enzymology	Clinical application of PCR-restriction enzyme pattern analysis for rapid identification of aerobic actinomycete isolates.	Wilson RW, Steingrube VA, Brown BA, Wallace RJ.	J Clin Microbiol	10.1128/jcm.36.1.148-152.1998	1998
Phylogeny	Nocardia veterana as a pathogen in North American patients.	Conville PS, Brown JM, Steigerwalt AG, Lee JW, Byrer DE, Anderson VL, Dorman SE, Holland SM, Cahill B, Carroll KC, Witebsky FG.	J Clin Microbiol	10.1128/jcm.41.6.2560-2568.2003	2003
Phylogeny	Identification of nocardia species by restriction endonuclease analysis of an amplified portion of the 16S rRNA gene.	Conville PS, Fischer SH, Cartwright CP, Witebsky FG.	J Clin Microbiol	10.1128/jcm.38.1.158-164.2000	2000
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
Phylogeny	Nocardia wallacei sp. nov. and Nocardia blacklockiae sp. nov., human pathogens and members of the "Nocardia transvalensis Complex".	Conville PS, Brown JM, Steigerwalt AG, Brown-Elliott BA, Witebsky FG.	J Clin Microbiol	10.1128/jcm.02011-07	2008
Phylogeny	Nocardia casuarinae sp. nov., an actinobacterial endophyte isolated from root nodules of Casuarina glauca.	Ghodhbane-Gtari F, Nouioui I, Salem K, Ktari A, Montero-Calasanz Mdel C, Tisa LS, Klenk HP, Gtari M.	Antonie Van Leeuwenhoek	10.1007/s10482-014-0168-6	2014
Phylogeny	Nocardia tenerifensis sp. nov.	Kampfer P, Buczolits S, Jackel U, Grun-Wollny I, Busse HJ.	Int J Syst Evol Microbiol	10.1099/ijs.0.02841-0	2004
Phylogeny	Nocardia mexicana sp. nov., a new pathogen isolated from human mycetomas.	Rodriguez-Nava V, Couble A, Molinard C, Sandoval H, Boiron P, Laurent F.	J Clin Microbiol	10.1128/jcm.42.10.4530-4535.2004	2004
Phylogeny	Nocardia kruczakiae sp. nov., a pathogen in immunocompromised patients and a member of the "N. nova complex".	Conville PS, Brown JM, Steigerwalt AG, Lee JW, Anderson VL, Fishbain JT, Holland SM, Witebsky FG.	J Clin Microbiol	10.1128/jcm.42.11.5139-5145.2004	2004

References

#10679	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43405
#18492	Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#41335	; Curators of the CIP;
#56994	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45937
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68368	Automatically annotated from API 20E .
#68371	Automatically annotated from API 50CH acid .
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123575	Collection of Institut Pasteur ; Curators of the CIP; CIP 104841
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Nocardia transvalensis (DSM 43405, ATCC 6865, DSM 43582)

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