Name: Nocardia transvalensis DSM 46068
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 10718

Type strain:

Species: Nocardia transvalensis

Culture col. no.: DSM 46068, CIP 766, IMET 7499, IMRU 1583, SSIC 667, JCM 15890, IFM 0332

Strain history: IFM 0332 <-- IMET 7499 <-- R. E. Gordon IMRU 1583 <-- M. Magnusson SSIC 667 <-- F. Mariat.

NCBI tax ID(s): 37333 (species)

SI-ID 50722

DSM 46068, CIP 766, IMET 7499

Other strains from Nocardia transvalensis

N. transvalensis 3426, 16, DSM 43405, ATCC 6865, ... (type strain)
N. transvalensis 193, Jr 366, A-0319, CIP 104829, ...
N. transvalensis JCM 12242, IFM 10065
N. transvalensis JCM 15839, IFM 0035

Section

Nocardia transvalensis DSM 46068 is a mesophilic bacterium that was isolated from mycetoma.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Mycobacteriales*
	Family	*Nocardiaceae*
	Genus	*Nocardia*
	Species	**Nocardia transvalensis**
	Full Scientific Name (LPSN)	Nocardia transvalensis Pijper and Pullinger 1927 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12418]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #12418]

Culture medium growth

[Ref.: #12418]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12418]

Culture medium composition

expand / minimize

[Ref.: #12418]

Culture medium

ORGANIC MEDIUM 79 (DSMZ Medium 426)

[Ref.: #12418]

Culture medium growth

[Ref.: #12418]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12418]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #12418]			growth	37 °C
[Ref.: #67770]			growth	28 °C

[Ref.: #12418]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12418]	Sample type/isolated from	mycetoma
[Ref.: #12418]	Country	Cameroon
[Ref.: #12418]	Country ISO 3 Code	CMR
[Ref.: #12418]	Continent	Africa

[Ref.: #67770]	Sample type/isolated from	mycetoma
* marker position based on {}

Isolation sources categories

#Infection	#Disease	-
#Host Body-Site	#Organ	#Skin, Nail, Hair
#Host	#Fungi	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC114209 (>99% sequence identity) for Nocardia transvalensis from Microbeatlas

Aquatic Samples	1
Soil Samples	30
Animal Samples	8
Plant Samples	11
Total Samples	50

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12418]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Nocardia transvalensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 15890	LC114209	1457	ENA	37333 tax ID
[Ref.: #20218]	Nocardia transvalensis strain DSM 46068 16S ribosomal RNA gene, partial sequence	JN041524	462	ENA	37333 tax ID	*

Availability in culture collections External links

[Ref.: #12418]

Culture collection no.

DSM 46068, CIP 766, IMET 7499, IMRU 1583, SSIC 667, JCM 15890, IFM 0332

[Ref.: #79987]

SI-ID 50722

References

#12418

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46068

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#79987

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID50722.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Nocardia transvalensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF