Neisseria animalis (DSM 23392, ATCC 49930, CCUG 808)

Name: Neisseria animalis (DSM 23392, ATCC 49930, CCUG 808)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 10487

Type strain

Strain Designation NA1, 1411

Culture col. no. DSM 23392 ATCC 49930 CCUG 808 CIP 72.15 NCTC 10212 4 more

NCBI tax ID(s) 492

Special Collections DSMZ CCUG CIP

History DSMZ <- CCUG <- U. Berger, Heidelberg, Germany CIP <- 1972, ATCC <- M.J. Pelczar: strain NA1 <- P. Hauduroy: strain 1411

Links

Neisseria animalis NA1 is a microaerophile bacterium that was isolated from guinea-pig.

microaerophile genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 377846

ATCC 19573,ATCC 49930,NCTC 10212,CCUG 808,CCUG 26879,CIP 72.15,LMG 26609,DSM 23392

@ref 20215

Last LPSN update 2026-05-29 08:27:20

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Neisseriales

Family Neisseriaceae

Genus Neisseria

Species Neisseria animalis

Full scientific name Neisseria animalis Berger 1960 (Approved Lists 1980)

BacDive ID	Other strains from **Neisseria animalis** (3)	Type strain
141316	N. animalis CCUG 809
144932	N. animalis CCUG 27176
144933	N. animalis CCUG 27177

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	98.5

Colony morphology

@ref	Type of hemolysis	Hemolysis ability
16828	gamma	0

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
16828	BHI MEDIUM (DSMZ Medium 215)	Medium recipe at MediaDive	Name: BHI MEDIUM (DSMZ Medium 215) Composition: Brain heart infusion 37.0 g/l Distilled water
16828	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
36066	MEDIUM 6 - Columbia agar with 10 % horse blood		Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
116393	CIP Medium 6	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
16828	positive	growth	37
36066	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
16828	microaerophile
125439	facultative anaerobe	90.104

Spore formation

@ref	Spore formation	Confidence
125439		99.75
125438		90.853

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68377	18257 ChEBI	ornithine	-	degradation	from API NH
68377	27897 ChEBI	tryptophan	-	energy source	from API NH
68377	16199 ChEBI	urea	-	hydrolysis	from API NH

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68377	35581 ChEBI	indole		from API NH

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68377	35581 ChEBI	indole	-	from API NH

Enzymes

@ref	Value	Activity	Ec
68377	beta-galactosidase	-	3.2.1.23	from API NH
16828	catalase	+	1.11.1.6
16828	cytochrome-c oxidase	+	1.9.3.1
68377	ornithine decarboxylase	-	4.1.1.17	from API NH
68377	tryptophan deaminase	-	4.1.99.1	from API NH
68377	urease	-	3.5.1.5	from API NH

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
16828	+	+/-	-	+	-	-	-	+/-	-	-	+	-	-
16828	-	+	+/-	-	+	-	-	-	+/-	-	-	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Mammals	#Rodentia (Other)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Isolation date
16828	guinea-pig
44278	Guinea-pig
116393	Animal, Guinea pig	Hamburg	Germany	DEU	Europe	1960

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
16828	1	Risk group (German classification) According to TRBA 466
116393	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM880699v1 assembly for Neisseria animalis ATCC 49930	complete	GCA_008806995	492.10	8048209491	492	98.27
66792	42685_A01 assembly for Neisseria animalis NCTC10212	complete	GCA_900636515	492.8	2896579436	492	97.98
66792	ASM379536v1 assembly for Neisseria animalis DSM 23392	contig	GCA_003795365	492.7	8017976888	492	68.75

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Neisseria animalis 16S rRNA gene, partial	AJ247234	457		492
16828	Neisseria animalis 16S rRNA gene (partial), strain NCTC10212	AJ239288	1355		492

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM880699v1 assembly for Neisseria animalis ATCC 49930
NCBI: GCA_008806995

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	90.10	no
125439	gram_stain	BacteriaNetⓘ	positive	65.52	no
125439	motility	BacteriaNetⓘ	no	88.66	no
125439	spore_formation	BacteriaNetⓘ	no	99.75	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Neisseria animalis ATCC 49930
NCBI: GCA_008806995.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	no
125438	anaerobic	anaerobicⓘ	no	90.79	yes
125438	aerobic	aerobicⓘ	no	60.90	yes
125438	spore-forming	spore-formingⓘ	no	90.85	no
125438	thermophilic	thermophileⓘ	no	98.33	yes
125438	flagellated	motile2+ⓘ	no	84.93	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Confirmation of the Need for Reclassification of Neisseria mucosa and Neisseria sicca Using Average Nucleotide Identity Blast and Phylogenetic Analysis of Whole-Genome Sequencing: Hinted by Clinical Misclassification of a Neisseria mucosa Strain.	Jin Y, Xu H, Yao Q, Gu B, Wang Z, Wang T, Yu X, Lu Y, Zheng B, Zhang Y.	Front Microbiol	10.3389/fmicb.2021.780183	2021
Pathogenicity	Molecular Assay for Detection of Genetic Markers Associated with Decreased Susceptibility to Cephalosporins in Neisseria gonorrhoeae.	Peterson SW, Martin I, Demczuk W, Bharat A, Hoang L, Wylie J, Allen V, Lefebvre B, Tyrrell G, Horsman G, Haldane D, Garceau R, Wong T, Mulvey MR.	J Clin Microbiol	10.1128/jcm.00493-15	2015
	Characterization of capsule genes in non-pathogenic Neisseria species.	Clemence MEA, Maiden MCJ, Harrison OB.	Microb Genom	10.1099/mgen.0.000208	2018
	Structural and evolutionary inference from molecular variation in Neisseria porins.	Derrick JP, Urwin R, Suker J, Feavers IM, Maiden MC.	Infect Immun	10.1128/iai.67.5.2406-2413.1999	1999
Phylogeny	Neisseria leonii sp. nov., isolated from the nose, lung, and liver of rabbits.	Boutroux M, Favre-Rochex S, Gorgette O, Touak G, Muhle E, Bouchier C, Chesneau O, Veyrier FJ, Clermont D, Rahi P.	Int J Syst Evol Microbiol	10.1099/ijsem.0.006460	2024
Phylogeny	Bordetella holmesii sp. nov., a new gram-negative species associated with septicemia.	Weyant RS, Hollis DG, Weaver RE, Amin MF, Steigerwalt AG, O'Connor SP, Whitney AM, Daneshvar MI, Moss CW, Brenner DJ.	J Clin Microbiol	10.1128/jcm.33.1.1-7.1995	1995

References

#16828	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23392
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#36066	; Curators of the CIP;
#44278	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 808
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68377	Automatically annotated from API NH .
#116393	Collection of Institut Pasteur ; Curators of the CIP; CIP 72.15
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Neisseria animalis (DSM 23392, ATCC 49930, CCUG 808)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API NH

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_008806995

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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