Acinetobacter pittii (DSM 9312, Tr III-106)

Name: Acinetobacter pittii (DSM 9312, Tr III-106)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 8104

Type strain

Strain Designation Tr III-106

Culture col. no. DSM 9312 Tr III-106

NCBI tax ID(s) 48296

Special Collections DSMZ

History DSMZ <- W. H. Traub

Links

Acinetobacter pittii Tr III-106 is a bacterium that was isolated from ear discharge.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 113254

DSM 9312

@ref 20215

Last LPSN update 2026-05-29 08:26:48

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Moraxellaceae

Genus Acinetobacter

Species Acinetobacter pittii

Full scientific name Acinetobacter pittii Nemec et al. 2011

BacDive ID	Other strains from **Acinetobacter pittii** (44)	Type strain
8146	A. pittii CCUG 61664, NCDC KC739, DSM 25618, ATCC 19004, ... (type strain)
8110	A. pittii Tr III-636, DSM 9318
8118	A. pittii Tr III-355, DSM 9341
134927	A. pittii CIP 110740, NIPH 2866
134928	A. pittii CIP 110739, NIPH 2844
134930	A. pittii CIP 110732, NIPH 14
134931	A. pittii CIP 110733, NIPH 76
134932	A. pittii CIP 110735, NIPH 202
134933	A. pittii CIP 110736, NIPH 336
134934	A. pittii CIP 110737, NIPH 2591
135089	A. pittii CIP 110738, NIPH 2719
136738	A. pittii CIP 110734, NIPH 95
136813	A. pittii CIP 110468, NIPH 3678, ANC 3678
138423	A. pittii CIP 110741, NIPH 2966
141511	A. pittii CCUG 2490, CIP 70.15, ATCC 17922, NCIMB 9017
141622	A. pittii CCUG 3854
144713	A. pittii CCUG 26384
145288	A. pittii CCUG 28106
145289	A. pittii CCUG 28107
149606	A. pittii CCUG 38063
155107	A. pittii CCUG 56494
155164	A. pittii CCUG 56689
155200	A. pittii CCUG 56887
155215	A. pittii CCUG 56940
155466	A. pittii CCUG 57818
155626	A. pittii CCUG 58506
155627	A. pittii CCUG 58522
155643	A. pittii CCUG 58581
155647	A. pittii CCUG 58633
155654	A. pittii CCUG 58661
156066	A. pittii CCUG 60254
156310	A. pittii CCUG 61123
156395	A. pittii CCUG 61553
156447	A. pittii CCUG 61836
156512	A. pittii CCUG 62275
156861	A. pittii CCUG 66170
158150	A. pittii IIF1SW-P1, DSM 104460
173486	A. pittii CIP 52.90
173487	A. pittii BM4427, CIP 111207
175315	A. pittii ApBS2, DSM 101620
175316	A. pittii ApBS3, DSM 101621
175317	A. pittii ApBS4, DSM 101622
175318	A. pittii ApBS5, DSM 101623
175319	A. pittii ICU patient isolate, DSM 110287

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	93.424
125438	negative	97.5

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
3542	TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
3542	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
3542	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	91.531
125439	obligate aerobe	99.367

Spore formation

@ref	Spore formation	Confidence
125438		93.398
125439		98.746

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68369	cytochrome oxidase	-	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
3542	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+	+	+	+	+	-
3542	-	-	+	-	-	-	-	-	-	+	-	-	-	-	-	+	+	+	+	+	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host Body-Site	#Organ	#Ear
#Host Body Product	#Fluids	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
3542	ear discharge	Germany	DEU	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
3542	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
124043	ASM1904822v1 assembly for Acinetobacter pittii FDAARGOS 1396	complete	GCA_019048225	48296.507	48296	98.63

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1904822v1 assembly for Acinetobacter pittii FDAARGOS 1396
NCBI: GCA_019048225

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.37	no
125439	gram_stain	BacteriaNetⓘ	negative	93.42	no
125439	motility	BacteriaNetⓘ	yes	61.03	no
125439	spore_formation	BacteriaNetⓘ	no	98.75	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Acinetobacter pittii strain FDAARGOS 1396 strain Not applicable
PATRIC: 48296.507

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.50	no
125438	anaerobic	anaerobicⓘ	no	98.38	no
125438	spore-forming	spore-formingⓘ	no	93.40	no
125438	aerobic	aerobicⓘ	yes	91.53	no
125438	thermophilic	thermophileⓘ	no	99.98	yes
125438	flagellated	motile2+ⓘ	no	76.63	no

Literature

References

#3542	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9312
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#68369	Automatically annotated from API 20NE .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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