Name: Rothia mucilaginosa 5762/67
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7777

Type strain:

Species: Rothia mucilaginosa

Strain Designation: 5762/67

Culture col. no.: DSM 20746, ATCC 25296, CCM 2417, NCTC 10663, CCUG 20962, CIP 71.14, JCM 10910, GIFU 9911, GTC 311, IAM 14815, IFM 10890, IFO 15673, IMSNU 22101, NBRC 15673, NCDO 2360, NCIMB 702360, PCM 2415, CCUG 3707

Strain history: CIP <- 1971, CCM <- 1967, T. Bergan: strain 5762/67 Micrococcus mucilaginosus

NCBI tax ID(s): 553201 (strain), 43675 (species)

SI-ID 389300

ATCC 25296, CCM 2417, NCTC 10663, DSM 20746, CCUG 20962, NCDO 2360, CCUG 3707, NCIMB 702360, IFO 15673, JCM 10910, NBRC 15673, IAM 14815, CIP 71.14

Other strains from Rothia mucilaginosa

Section

Rothia mucilaginosa 5762/67 is a microaerophile, mesophilic, Gram-positive bacterium that was isolated from throat.

coccus-shaped
Gram-positive
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Rothia*
	Species	**Rothia mucilaginosa**
	Full Scientific Name (LPSN)	Rothia mucilaginosa (Bergan and Kocur 1982 ex Migula 1900) Collins et al. 2000

Synonym

Stomatococcus mucilaginosus

Information on morphological and physiological properties Morphology

[Ref.: #121156]	Gram stain	positive

[Ref.: #121156]	Cell shape	coccus-shaped

[Ref.: #121156]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9055]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #9055]

Culture medium growth

[Ref.: #9055]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9055]

Culture medium composition

expand / minimize

[Ref.: #9055]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #9055]

Culture medium growth

[Ref.: #9055]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9055]

Culture medium composition

expand / minimize

[Ref.: #37615]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #37615]

Culture medium growth

[Ref.: #37615]

Culture medium composition

expand / minimize

[Ref.: #121156]

Culture medium

CIP Medium 3

[Ref.: #121156]

Culture medium growth

[Ref.: #121156]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #9055]		growth	37 °C
[Ref.: #9055]		growth	30 °C
[Ref.: #37615]		growth	30 °C
[Ref.: #47240]		growth	37 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #121156]		growth	30-41 °C
[Ref.: #121156]	no	growth	10 °C
[Ref.: #121156]	no	growth	22 °C
[Ref.: #121156]	no	growth	45 °C

[Ref.: #9055]	Temperature range	mesophilic
[Ref.: #37615]	Temperature range	mesophilic
[Ref.: #47240]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #121156]	Temperature range	psychrophilic
[Ref.: #121156]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #47240]	Oxygen tolerance	microaerophile
[Ref.: #121156]	Oxygen tolerance	facultative anaerobe

[Ref.: #9055]	Murein short key	A11.04
[Ref.: #9055]	Murein types	A3alpha L-Lys-L-Ala

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68381]	arginine ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	D-fructose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-glucose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	D-mannose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #121156]	hippurate ChEBI	+	hydrolysis
[Ref.: #68381]	hippurate ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	maltose ChEBI	+	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	melezitose ChEBI	+	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #121156]	nitrate ChEBI	+	reduction
[Ref.: #121156]	nitrite ChEBI	+	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68381]	sorbitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	+	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	trehalose ChEBI	+	builds acid from	* from API 50CH acid, API rID32STR
[Ref.: #68371]	turanose ChEBI	+	builds acid from	* from API 50CH acid
[Ref.: #68381]	urea ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #121156]		indole ChEBI	no
[Ref.: #68381]		acetoin ChEBI	yes	* from API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #121156]		acetoin ChEBI	-
[Ref.: #68381]		acetoin ChEBI	+	* from API rID32STR

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	+		* from API rID32STR
[Ref.: #121156]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68381]	alkaline phosphatase	-	3.1.3.1	* from API rID32STR, API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68381]	alpha-galactosidase	-	3.2.1.22	* from API rID32STR, API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #121156]	amylase	-
[Ref.: #68381]	arginine dihydrolase	-	3.5.3.6	* from API rID32STR
[Ref.: #121156]	beta-galactosidase	-	3.2.1.23
[Ref.: #68381]	beta-galactosidase	-	3.2.1.23	* from API rID32STR, API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68381]	beta-glucuronidase	-	3.2.1.31	* from API rID32STR, API zym
[Ref.: #68381]	beta-mannosidase	-	3.2.1.25	* from API rID32STR
[Ref.: #121156]	caseinase	-	3.4.21.50
[Ref.: #121156]	catalase	-	1.11.1.6
[Ref.: #121156]	coagulase	-
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #121156]	DNase	-
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #121156]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #121156]	gelatinase	-
[Ref.: #121156]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #121156]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #121156]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68381]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32STR, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #121156]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #121156]	oxidase	-
[Ref.: #121156]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #121156]	protease	-
[Ref.: #68381]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API rID32STR
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #121156]	tween esterase	-
[Ref.: #121156]	urease	-	3.5.1.5
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #121156]	12099	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-	+	-	-	-	+/-	-	-	+	-	-	+	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-	+/-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #121156]	3306	not determinedn.d.	+	-	-	-	-	-	-	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #9055]	10781	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	not determinedn.d.	+	-	+	-	+	-	-	-	+	-	+	+	-	-	-
[Ref.: #9055]	10684	-	+	-	-	-	-	-	-	-	-	+	-	+	-	-	-	+	+	-	+	-	-	-	-	-	+	-	+	+	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121156]	13229	-	-	-	-	-	+	-	-	-	-	+	-	-	-	-	+	+	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9055]	Sample type/isolated from	throat

[Ref.: #47240]	Sample type/isolated from	Human pharynx
[Ref.: #47240]	Sampling date	1967
[Ref.: #47240]	Country	Norway
[Ref.: #47240]	Country ISO 3 Code	NOR
[Ref.: #47240]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Human throat
[Ref.: #67770]	Country	Norway
[Ref.: #67770]	Country ISO 3 Code	NOR
[Ref.: #67770]	Continent	Europe

[Ref.: #121156]	Sample type/isolated from	Human, Throat
[Ref.: #121156]	Country	Norway
[Ref.: #121156]	Country ISO 3 Code	NOR
[Ref.: #121156]	Continent	Europe
[Ref.: #121156]	Isolation date	1967
* marker position based on {}

Isolation sources categories

#Host Body-Site

#Oral cavity and airways

#Throat

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X87758 (>99% sequence identity) for Rothia mucilaginosa from Microbeatlas

Aquatic Samples	6900
Soil Samples	4381
Animal Samples	205395
Plant Samples	2095
Total Samples	218771

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9055]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #121156]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	M.mucilaginosus 16S rRNA gene	X87758	1467	ENA	43675 tax ID	*
[Ref.: #20218]	S.mucilaginosus 16S rRNA gene	X95483	1435	ENA	43675 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Rothia mucilaginosa ATCC 25296	GCA_000175615	contig	GenBank	553201 tax ID
[Ref.: #66792]	Rothia mucilaginosa ATCC 25296	553201.3	wgs	PATRIC	553201 tax ID	*
[Ref.: #66792]	Rothia mucilaginosa ATCC 25296	645058800	draft	JGI IMG/M	553201 tax ID	*

[Ref.: #9055]	GC-content	59.0 mol%
[Ref.: #67770]	GC-content	59 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	59.5 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Rothia mucilaginosa ATCC 25296 PATRIC: 553201.3
[Ref.: #69480]	gram-positive	yes	95.133	no
[Ref.: #69480]	anaerobic	no	97.158	yes
[Ref.: #69480]	halophile	yes	52.232	no
[Ref.: #69480]	spore-forming	no	95.222	no
[Ref.: #69480]	glucose-util	yes	84.098	no
[Ref.: #69480]	thermophile	no	95.079	yes
[Ref.: #69480]	aerobic	no	84.002	yes
[Ref.: #69480]	motile	no	93.709	no
[Ref.: #69480]	flagellated	no	96.527	no
[Ref.: #69480]	glucose-ferment	yes	72.824	no

Availability in culture collections External links

[Ref.: #9055]

Culture collection no.

DSM 20746, ATCC 25296, CCM 2417, NCTC 10663, CCUG 20962, CIP 71.14, JCM 10910, GIFU 9911, GTC 311, IAM 14815, IFM 10890, IFO 15673, IMSNU 22101, NBRC 15673, NCDO 2360, NCIMB 702360, PCM 2415, CCUG 3707

[Ref.: #77220]

SI-ID 389300

Literature:

	Title	Authors	Journal	DOI	Year
Phylogeny	Identification of disulphide stress-responsive extracytoplasmic function sigma factors in Rothia mucilaginosa.	Nambu T, Yamane K, Yamanaka T, Mashimo C, Maruyama H, Yoshida M, Hayashi H, Leung KP, Fukushima H	Arch Oral Biol	10.1016/j.archoralbio.2012.10.017	2013	*
Phylogeny	[Isolation and comparative analysis of glycolipid fractions in bifidobacteria].	Novik GI, Astapovich NI, Grzegorzewicz A, Gamian A	Mikrobiologiia		2005	*
	Commensal Oral Rothia mucilaginosa Produces Enterobactin, a Metal-Chelating Siderophore.	Uranga CC, Arroyo P Jr, Duggan BM, Gerwick WH, Edlund A	mSystems	10.1128/mSystems.00161-20	2020	*

References

#9055

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20746

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37615 ; Curators of the CIP;
#47240 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 20962

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68381

Automatically annotated from API rID32STR .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#77220

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389300.1 )

#121156 Collection of Institut Pasteur ; Curators of the CIP; CIP 71.14
* These data were automatically processed and therefore are not curated

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Rothia mucilaginosa ATCC 25296

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