Name: Neomicrococcus lactis DW152
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 7758

Type strain:

Species: Neomicrococcus lactis

Strain Designation: DW152

Culture col. no.: DSM 23694, MCC 2278, MTCC 10523, JCM 19249

Strain history: MTCC 10523 <-- Chittpurna et al. DW152.

NCBI tax ID(s): 732241 (species)

Section

Neomicrococcus lactis DW152 is a mesophilic bacterium that was isolated from dairy farm environment.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Neomicrococcus*
	Species	**Neomicrococcus lactis**
	Full Scientific Name (LPSN)	Neomicrococcus lactis (Chittpurna et al. 2011) Prakash et al. 2015

Synonym

Micrococcus lactis

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %94.501

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.996

[Ref.: #17347]	Murein short key	A11.31
[Ref.: #17347]	Murein types	A4alpha L-Lys-D-Asp

[Ref.: #67770]

Observation

quinones: MK-8(H₂)

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17347]	Sample type/isolated from	dairy farm environment
[Ref.: #17347]	Geographic location (country and/or sea, region)	Hyderabad
[Ref.: #17347]	Country	India
[Ref.: #17347]	Country ISO 3 Code	IND
[Ref.: #17347]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Dairy industry waste
[Ref.: #67770]	Geographic location (country and/or sea, region)	Hyderabad
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Built environment	-
#Engineered	#Food production	#Dairy product

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence FN673681 (>99% sequence identity) for Neomicrococcus aestuarii from Microbeatlas

Aquatic Samples	6
Soil Samples	8
Animal Samples	21
Plant Samples	1
Total Samples	36

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17347]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17347]	Micrococcus lactis partial 16S rRNA gene, type strain DW152T	FN673681	1429	ENA	732241 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Neomicrococcus lactis DSM 23694	GCA_014200305	contig	GenBank	732241 tax ID	*
[Ref.: #66792]	Neomicrococcus lactis strain DSM 23694	732241.3	wgs	PATRIC	732241 tax ID	*
[Ref.: #66792]	Neomicrococcus lactis DSM 23694	2844612724	draft	JGI IMG/M	732241 tax ID	*

[Ref.: #17347]	GC-content	68.0 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	68 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Neomicrococcus lactis strain DSM 23694 PATRIC: 732241.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Neomicrococcus lactis strain DSM 23694 PATRIC: 732241.3
[Ref.: #69480]	motile	no	95.458	no
[Ref.: #69480]	flagellated	no	97.578	no
[Ref.: #69480]	gram-positive	yes	92.916	no
[Ref.: #69480]	anaerobic	no	99.727	no
[Ref.: #69480]	aerobic	yes	97.344	no
[Ref.: #69480]	halophile	no	84.636	no
[Ref.: #69480]	spore-forming	no	95.487	no
[Ref.: #69480]	thermophile	no	97.866	no
[Ref.: #69480]	glucose-util	yes	80.3	no
[Ref.: #69480]	glucose-ferment	no	91.193	no

Availability in culture collections External links

[Ref.: #17347]

Culture collection no.

DSM 23694, MCC 2278, MTCC 10523, JCM 19249

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Proposal for creation of a new genus Neomicrococcus gen. nov. to accommodate Zhihengliuella aestuarii Baik et al. 2011 and Micrococcus lactis Chittpurna et al. 2011 as Neomicrococcus aestuarii comb. nov. and Neomicrococcus lactis comb. nov.	Prakash O, Sharma A, Nimonkar Y, Shouche YS	Int J Syst Evol Microbiol	10.1099/ijsem.0.000490	2015	*
Phylogeny	Micrococcus lactis sp. nov., isolated from dairy industry waste.	Chittpurna, Singh PK, Verma D, Pinnaka AK, Mayilraj S, Korpole S	Int J Syst Evol Microbiol	10.1099/ijs.0.028043-0	2011	*

References

#17347

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23694

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Neomicrococcus lactis strain DSM 23694

Neomicrococcus lactis strain DSM 23694

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