Arthrobacter pascens B89 is an aerobe, Gram-positive, rod-shaped bacterium that was isolated from Soil.
Gram-positive rod-shaped aerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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| Domain Bacteria |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Micrococcales |
| Family Micrococcaceae |
| Genus Arthrobacter |
| Species Arthrobacter pascens |
| Full scientific name Arthrobacter pascens Lochhead and Burton 1953 (Approved Lists 1980) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 18447 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 18447 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 18447 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 18447 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 18447 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 18447 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 37391 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 8774 | CORYNEBACTERIUM AGAR (DSMZ Medium 53) | Medium recipe at MediaDive | Name: CORYNEBACTERIUM AGAR (DSMZ Medium 53) Composition: Agar 15.0 g/l Casein peptone 10.0 g/l NaCl 5.0 g/l Glucose 5.0 g/l Yeast extract 5.0 g/l Distilled water | ||
| 121615 | CIP Medium 72 | Medium recipe at CIP | |||
| 121615 | CIP Medium 3 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 96.64 |
| 8774 | Compoundterregens factor |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 18447 | NaCl | positive | maximum | 5 % |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8774 | A11.05 | A3alpha L-Lys-L-Ala2 |
| 67770 | ObservationProduction of "Terregens factor" |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 18447 | 22599 ChEBI | arabinose | - | ||
| 68368 | 29016 ChEBI | arginine | - | hydrolysis | from API 20E |
| 18447 | 62968 ChEBI | cellulose | - | ||
| 68368 | 16947 ChEBI | citrate | - | assimilation | from API 20E |
| 68379 | 17634 ChEBI | D-glucose | - | fermentation | from API Coryne |
| 68379 | 16899 ChEBI | D-mannitol | + | fermentation | from API Coryne |
| 68379 | 16988 ChEBI | D-ribose | + | fermentation | from API Coryne |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68379 | 4853 ChEBI | esculin | - | hydrolysis | from API Coryne |
| 18447 | 28757 ChEBI | fructose | - | ||
| 68368 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20E |
| 18447 | 17234 ChEBI | glucose | - | ||
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68379 | 17716 ChEBI | lactose | - | fermentation | from API Coryne |
| 68368 | 25094 ChEBI | lysine | - | degradation | from API 20E |
| 68379 | 17306 ChEBI | maltose | - | fermentation | from API Coryne |
| 18447 | 29864 ChEBI | mannitol | - | ||
| 18447 | 17268 ChEBI | myo-inositol | - | ||
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 121615 | 17632 ChEBI | nitrate | + | reduction | |
| 121615 | 16301 ChEBI | nitrite | - | reduction | |
| 68368 | 18257 ChEBI | ornithine | - | degradation | from API 20E |
| 18447 | 16634 ChEBI | raffinose | + | ||
| 18447 | 17992 ChEBI | sucrose | - | ||
| 68379 | 17992 ChEBI | sucrose | - | fermentation | from API Coryne |
| 68368 | 27897 ChEBI | tryptophan | - | energy source | from API 20E |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68368 | 16199 ChEBI | urea | - | hydrolysis | from API 20E |
| 18447 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68379 | alkaline phosphatase | - | 3.1.3.1 | from API Coryne |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68379 | alpha-glucosidase | + | 3.2.1.20 | from API Coryne |
| 68368 | arginine dihydrolase | - | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68379 | beta-galactosidase | + | 3.2.1.23 | from API Coryne |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68379 | beta-glucosidase | - | 3.2.1.21 | from API Coryne |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68379 | beta-glucuronidase | + | 3.2.1.31 | from API Coryne |
| 121615 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68368 | gelatinase | - | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68368 | ornithine decarboxylase | - | 4.1.1.17 | from API 20E |
| 121615 | oxidase | - | ||
| 68379 | pyrazinamidase | + | 3.5.1.B15 | from API Coryne |
| 68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API Coryne |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 121615 | urease | - | 3.5.1.5 | |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 68368 | urease | - | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
Global distribution of 16S sequence X80740 (>99% sequence identity) for Arthrobacter from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM3952612v1 assembly for Arthrobacter pascens JCM 11606 | scaffold | 1677 | 59.36 | ||||
| 66792 | ASM1705246v1 assembly for Arthrobacter pascens DSM 20545 | contig | 1677 | 47.47 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 92.34 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 58.48 | no |
| 125439 | motility | BacteriaNetⓘ | no | 62.24 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 96.64 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 92.73 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 98.27 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 61.86 | no |
| 125438 | aerobic | aerobicⓘ | yes | 88.25 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.00 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 90.50 | no |
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| Screening of high-efficiency nitrogen-fixing bacteria from the traditional Chinese medicine plant Astragalus mongolicus and its effect on plant growth promotion and bacterial communities in the rhizosphere. | Shi Z, Guo X, Lei Z, Wang Y, Yang Z, Niu J, Liang J. | BMC Microbiol | 10.1186/s12866-023-03026-1 | 2023 | ||
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| Diversity, distribution, and antagonistic activities of rhizobacteria of Panax notoginseng. | Fan ZY, Miao CP, Qiao XG, Zheng YK, Chen HH, Chen YW, Xu LH, Zhao LX, Guan HL. | J Ginseng Res | 10.1016/j.jgr.2015.05.003 | 2016 | ||
| Paenarthrobacter sp. GOM3 Is a Novel Marine Species With Monoaromatic Degradation Relevance. | Rosas-Diaz J, Escobar-Zepeda A, Adaya L, Rojas-Vargas J, Cuervo-Amaya DH, Sanchez-Reyes A, Pardo-Lopez L. | Front Microbiol | 10.3389/fmicb.2021.713702 | 2021 | ||
| Microbiological Analysis of Surfaces of Leonardo Da Vinci's Atlantic Codex: Biodeterioration Risk. | Tarsitani G, Moroni C, Cappitelli F, Pasquariello G, Maggi O. | Int J Microbiol | 10.1155/2014/214364 | 2014 | ||
| Soil mineral composition matters: response of microbial communities to phenanthrene and plant litter addition in long-term matured artificial soils. | Babin D, Vogel C, Zuhlke S, Schloter M, Pronk GJ, Heister K, Spiteller M, Kogel-Knabner I, Smalla K. | PLoS One | 10.1371/journal.pone.0106865 | 2014 | ||
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| Comparison of chemical assay, bioassay, enzyme-linked immunosorbent assay, and dot blot hybridization for detection of aerobactin in members of the family Enterobacteriaceae. | Le Roy D, Bouchet A, Saulnier P, Pecquet S, Andremont A. | Appl Environ Microbiol | 10.1128/aem.59.3.942-944.1993 | 1993 | ||
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| Pathogenicity | Peptidoglycan Endopeptidase from Novel Adaiavirus Bacteriophage Lyses Pseudomonas aeruginosa Strains as Well as Arthrobacter globiformis and A. pascens Bacteria. | Petrzik K. | Microorganisms | 10.3390/microorganisms11081888 | 2023 | |
| Identification of Bioactive Peptides from Caenorhabditis elegans Secretions That Promote Indole-3-Acetic Acid Production in Arthrobacter pascens ZZ21. | Sun S, Li M, Tao L, Liu X, Ouyang L, Li G, Hu F, Li H. | Microorganisms | 10.3390/microorganisms13081951 | 2025 | ||
| One-pot synthesis of beta-alanine from 1,3-diaminopropane using two-enzyme cascade in cell-free biotransformation. | Shanmugasundaram S, Roshni Yesudhas AJ, Kagoo A, Subramanian R. | J Biosci Bioeng | 10.1016/j.jbiosc.2025.10.013 | 2025 | ||
| Biodegradation of BTEX by Bacteria Isolated From Soil Contaminated With Petroleum Sludge and Liquid and Solid Petrochemical Effluents. | Panah ZM, Tabaii MJ, Rizi MSS. | Microbiologyopen | 10.1002/mbo3.70132 | 2025 | ||
| Identification of Bioactive Peptides from Caenorhabditis elegans Secretions That Promote Indole-3-Acetic Acid Production in Arthrobacter pascens ZZ21 | Sun S, Li M, Tao L, Liu X, Ouyang L, Li G, Hu F, Li H. | Microorganisms | 2025 | |||
| Drought-tolerant rhizobacteria with predicted functional traits enhanced wheat growth and P uptake under moderate drought and low P-availability. | Benmrid B, Ghoulam C, Ammar I, Nkir D, Saidi R, Staropoli A, Iacomino G, ELhajjami E, Cheto S, Geistlinger J, Idbella M, Bargaz A. | Microbiol Res | 10.1016/j.micres.2024.127795 | 2024 | ||
| Screening of potential phosphate solubilizing bacteria inoculants should consider the contrast in phosphorus bio-solubilization rate along with plant growth promotion and phosphorus use efficiency. | Elhaissoufi W, Ibnyasser A, Haddine M, Zeroual Y, Ghani R, Barakat A, Rchiad Z, Ghoulam C, Bargaz A. | J Appl Microbiol | 10.1093/jambio/lxac077 | 2023 | ||
| Discrepancies in rhizobacterial assembly caused by glyphosate application and herbicide-tolerant soybean Co-expressing GAT and EPSPS. | Fazal A, Yang M, Wang X, Lu Y, Yao W, Luo F, Han M, Song Y, Cai J, Yin T, Niu K, Sun S, Qi J, Lu G, Wen Z, Yang Y. | J Hazard Mater | 10.1016/j.jhazmat.2023.131053 | 2023 | ||
| Climate history modulates stress responses of common soil bacteria under experimental drought. | Bouskill NJ, Chacon SS, Cusack DF, Dietterich LH, Chen L, Khurram A, Voriskova J, Holman HN. | ISME J | 10.1093/ismejo/wraf075 | 2025 | ||
| Microbial degradation and community structure analysis of hydroxyl-terminated polybutadiene (HTPB). | Zhang Y, Zou M, Lodhi AF, Deng YL. | AMB Express | 10.1186/s13568-021-01334-1 | 2021 | ||
| Combination of plant-growth-promoting and fluoranthene-degrading microbes enhances phytoremediation efficiency in the ryegrass rhizosphere. | Li W, Zhang Z, Sun B, Hu S, Wang D, Hu F, Li H, Xu L, Jiao J. | Environ Sci Pollut Res Int | 10.1007/s11356-020-10937-3 | 2021 | ||
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| Antibacterial and Anticancer Activity and Untargeted Secondary Metabolite Profiling of Crude Bacterial Endophyte Extracts from Crinum macowanii Baker Leaves. | Sebola TE, Uche-Okereafor NC, Mekuto L, Makatini MM, Green E, Mavumengwana V. | Int J Microbiol | 10.1155/2020/8839490 | 2020 | ||
| Advanced technologies in plant factories: exploring current and future economic and environmental benefits in urban horticulture. | Yuan X, Hu J, Marcelis LFM, Heuvelink E, Peng J, Yang X, Yang Q. | Hortic Res | 10.1093/hr/uhaf024 | 2025 | ||
| Genetics | Integrating metagenomics and culturomics to uncover the soil bacterial community in Asparagus cochinchinensis cultivation. | Yu J, Yang S, Zhang X, Liu X, Tang X, Wang L, Chen J, Luo H, Liu C, Song C. | Front Microbiol | 10.3389/fmicb.2024.1467864 | 2024 | |
| Aerobiology and Environmental Zonation in Gypsum Caves: A Comparative Study of Culturing and NGS Approaches. | Martin-Pozas T, Fernandez-Cortes A, Calaforra JM, Sanchez-Moral S, Saiz-Jimenez C, Jurado V. | Microb Ecol | 10.1007/s00248-025-02591-4 | 2025 | ||
| Caenorhabditis elegans Extracts Stimulate IAA Biosynthesis in Arthrobacter pascens ZZ21 via the Indole-3-pyruvic Acid Pathway. | Li M, Li T, Zhou M, Li M, Zhao Y, Xu J, Hu F, Li H. | Microorganisms | 10.3390/microorganisms9050970 | 2021 | ||
| Functional Redundancy and Dual Function of a Hypothetical Protein in the Biosynthesis of Eunicellane-Type Diterpenoids. | Chaudhri AA, Kakumu Y, Thiengmag S, Liu JC, Lin GM, Durusu S, Biermann F, Boeck M, Voigt CA, Clardy J, Ueoka R, Walker AS, Helfrich EJN. | ACS Chem Biol | 10.1021/acschembio.4c00413 | 2024 | ||
| Biochar immobilized plant growth-promoting rhizobacteria enhanced the physicochemical properties, agronomic characters and microbial communities during lettuce seedling. | Guan TK, Wang QY, Li JS, Yan HW, Chen QJ, Sun J, Liu CJ, Han YY, Zou YJ, Zhang GQ. | Front Microbiol | 10.3389/fmicb.2023.1218205 | 2023 | ||
| Enzymology | Inoculation and co-inoculation of lettuce and arugula hydroponically influence nitrogen metabolism, plant growth, nutrient acquisition and photosynthesis. | Oliveira CEDS, Sena Oliveira TJS, Jalal A, Fernandes GC, Bastos AC, da Silva MR, Sant'Ana GR, Aguilar JV, de Camargos LS, Zoz T, Teixeira Filho MCM. | Front Plant Sci | 10.3389/fpls.2025.1547821 | 2025 | |
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| Screening of Red Sea- and Mediterranean Sea-derived Actinomycetes for Antimicrobial and Antitumor activities: LC-ESI-HRMS-based Metabolomics Study. | Abdel-Razik MA, Azmy AF, Dishisha T, El-Gendy AO, Afzan A, Kamal N, Tawfike A, Sebak M. | Microb Cell Fact | 10.1186/s12934-025-02759-0 | 2025 | ||
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| Diversity and plant growth promoting ability of rice root-associated bacteria in Burkina-Faso and cross-comparison with metabarcoding data. | Sondo M, Wonni I, Koita K, Rimbault I, Barro M, Tollenaere C, Moulin L, Klonowska A. | PLoS One | 10.1371/journal.pone.0287084 | 2023 | ||
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| Evaluation of the complexity of indoor air in hospital wards based on PM2.5, real-time PCR, adenosine triphosphate bioluminescence assay, microbial culture and mass spectrometry. | Ling S, Hui L. | BMC Infect Dis | 10.1186/s12879-019-4249-z | 2019 | ||
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| Metabolism | Characterization of an exo-inulinase from Arthrobacter: a novel NaCl-tolerant exo-inulinase with high molecular mass. | Shen J, Zhang R, Li J, Tang X, Li R, Wang M, Huang Z, Zhou J. | Bioengineered | 10.1080/21655979.2015.1019686 | 2015 | |
| Metabolism | Screening and Improving the Recombinant Nitrilases and Application in Biotransformation of Iminodiacetonitrile to Iminodiacetic Acid. | Liu ZQ, Baker PJ, Cheng F, Xue YP, Zheng YG, Shen YC. | PLoS One | 10.1371/journal.pone.0067197 | 2013 | |
| Genetics | Harmonizing technological advances in phenomics and genomics for enhanced salt tolerance in rice from a practical perspective. | Jaiswal S, Gautam RK, Singh RK, Krishnamurthy SL, Ali S, Sakthivel K, Iquebal MA, Rai A, Kumar D. | Rice (N Y) | 10.1186/s12284-019-0347-1 | 2019 | |
| The Contrivance of Plant Growth Promoting Microbes to Mitigate Climate Change Impact in Agriculture. | Fiodor A, Singh S, Pranaw K. | Microorganisms | 10.3390/microorganisms9091841 | 2021 | ||
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| Phylogeny | Office space bacterial abundance and diversity in three metropolitan areas. | Hewitt KM, Gerba CP, Maxwell SL, Kelley ST. | PLoS One | 10.1371/journal.pone.0037849 | 2012 | |
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| Diversity of green-like and red-like ribulose-1,5-bisphosphate carboxylase/oxygenase large-subunit genes (cbbL) in differently managed agricultural soils. | Selesi D, Schmid M, Hartmann A. | Appl Environ Microbiol | 10.1128/aem.71.1.175-184.2005 | 2005 | ||
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| Phylogeny | Arthrobacter pokkalii sp nov, a Novel Plant Associated Actinobacterium with Plant Beneficial Properties, Isolated from Saline Tolerant Pokkali Rice, Kerala, India. | Krishnan R, Menon RR, Tanaka N, Busse HJ, Krishnamurthi S, Rameshkumar N | PLoS One | 10.1371/journal.pone.0150322 | 2016 | |
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| Phylogeny | Arthrobacter scleromae sp. nov. isolated from human clinical specimens. | Huang Y, Zhao N, He L, Wang L, Liu Z, You M, Guan F. | J Clin Microbiol | 10.1128/jcm.43.3.1451-1455.2005 | 2005 | |
| Phylogeny | Citricoccus muralis gen. nov., sp. nov., a novel actinobacterium isolated from a medieval wall painting. | Altenburger P, Kampfer P, Schumann P, Steiner R, Lubitz W, Busse HJ | Int J Syst Evol Microbiol | 10.1099/00207713-52-6-2095 | 2002 |
| #8774 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20545 |
| #18447 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the JMRC: Jena Microbial Resource Collection (JMRC): |
| #37391 | ; Curators of the CIP; |
| #47856 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 23843 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68379 | Automatically annotated from API Coryne . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #121615 | Collection of Institut Pasteur ; Curators of the CIP; CIP 102362 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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BacDive in 2025: the core database for prokaryotic strain data