Name: Kineococcus xinjiangensis S2-20
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6319

Type strain:

Species: Kineococcus xinjiangensis

Strain Designation: S2-20

Culture col. no.: DSM 22857, KCTC 19474, CCTCC AB 207179, JCM 16219, NBRC 107624, CIP 110123

Strain history: CIP <- 2010, CCTCC <- M. Liu, Wuhan Univ., Wuhan, China: strain S2-20

NCBI tax ID(s): 512762 (species)

SI-ID 362801

KCTC 19474, JCM 16219, CIP 110123

Section

Kineococcus xinjiangensis S2-20 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from desert sand.

coccus-shaped
Gram-positive
motile
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kineosporiales*
	Family	*Kineosporiaceae*
	Genus	*Kineococcus*
	Species	**Kineococcus xinjiangensis**
	Full Scientific Name (LPSN)	Kineococcus xinjiangensis Liu et al. 2009

Information on morphological and physiological properties Morphology

[Ref.: #29018]	Gram stain	positive
[Ref.: #67771]	Gram stain	positive
[Ref.: #123983]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #29018]	Cell shape	coccus-shaped
[Ref.: #123983]	Cell shape	oval-shaped

[Ref.: #29018]	Motility	yes
[Ref.: #123983]	Motility	yes

[Ref.: #19800]	Colony color	Maize yellow
[Ref.: #19800]	Incubation period	10-14 days
[Ref.: #19800]	Cultivation medium used	ISP 2

[Ref.: #19800]	Colony color	Golden yellow
[Ref.: #19800]	Incubation period	10-14 days
[Ref.: #19800]	Cultivation medium used	ISP 3

[Ref.: #19800]	Colony color	Grey white
[Ref.: #19800]	Incubation period	10-14 days
[Ref.: #19800]	Cultivation medium used	ISP 4

[Ref.: #19800]	Colony color	Grey white
[Ref.: #19800]	Incubation period	10-14 days
[Ref.: #19800]	Cultivation medium used	ISP 5

[Ref.: #19800]	Colony color	Sulfur yellow
[Ref.: #19800]	Incubation period	10-14 days
[Ref.: #19800]	Cultivation medium used	ISP 6

[Ref.: #19800]	Colony color	Cream
[Ref.: #19800]	Incubation period	10-14 days
[Ref.: #19800]	Cultivation medium used	ISP 7

[Ref.: #29018]

Pigment production

yes

[Ref.: #19800]	Multicellular complex forming ability	no
[Ref.: #19800]	Medium Name (multicellularity)	ISP 2

[Ref.: #19800]	Multicellular complex forming ability	no
[Ref.: #19800]	Medium Name (multicellularity)	ISP 3

[Ref.: #19800]	Multicellular complex forming ability	no
[Ref.: #19800]	Medium Name (multicellularity)	ISP 4

[Ref.: #19800]	Multicellular complex forming ability	no
[Ref.: #19800]	Medium Name (multicellularity)	ISP 5

[Ref.: #19800]	Multicellular complex forming ability	no
[Ref.: #19800]	Medium Name (multicellularity)	ISP 6

[Ref.: #19800]	Multicellular complex forming ability	no
[Ref.: #19800]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16492]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #16492]

Culture medium growth

[Ref.: #16492]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16492]

Culture medium composition

expand / minimize

[Ref.: #19800]

Culture medium

ISP 2

[Ref.: #19800]

Culture medium growth

[Ref.: #19800]

Culture medium composition

expand / minimize

[Ref.: #19800]

Culture medium

ISP 3

[Ref.: #19800]

Culture medium growth

[Ref.: #19800]

Culture medium composition

expand / minimize

[Ref.: #19800]

Culture medium

ISP 4

[Ref.: #19800]

Culture medium growth

[Ref.: #19800]

Culture medium composition

expand / minimize

[Ref.: #19800]

Culture medium

ISP 5

[Ref.: #19800]

Culture medium growth

[Ref.: #19800]

Culture medium composition

expand / minimize

[Ref.: #19800]

Culture medium

ISP 6

[Ref.: #19800]

Culture medium growth

[Ref.: #19800]

Culture medium composition

expand / minimize

[Ref.: #19800]

Culture medium

ISP 7

[Ref.: #19800]

Culture medium growth

[Ref.: #19800]

Culture medium composition

expand / minimize

[Ref.: #37919]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37919]

Culture medium growth

[Ref.: #37919]

Culture medium composition

expand / minimize

[Ref.: #123983]

Culture medium

CIP Medium 72

[Ref.: #123983]

Culture medium growth

[Ref.: #123983]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #123983]

Culture medium

CIP Medium 566

[Ref.: #123983]

Culture medium growth

[Ref.: #123983]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #16492]	growth	28 °C
[Ref.: #19800]	optimum	28 °C
[Ref.: #29018]	growth	14-40 °C
[Ref.: #29018]	optimum	37 °C
[Ref.: #37919]	growth	37 °C
[Ref.: #67770]	growth	37 °C
[Ref.: #67771]	growth	37 °C

[Ref.: #16492]	Temperature range	mesophilic
[Ref.: #19800]	Temperature range	mesophilic
[Ref.: #29018]	Temperature range	mesophilic
[Ref.: #37919]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29018]			optimum	8
[Ref.: #29018]			growth	06-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29018]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe
[Ref.: #123983]	Oxygen tolerance	obligate aerobe

[Ref.: #29018]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %98
[Ref.: #69480]	Ability of spore formation	no Confidence in %96.607

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29018]		NaCl		growth	<2	%
[Ref.: #29018]		NaCl		optimum	0.5	%

[Ref.: #29018]	Observation	aggregates in clumps
[Ref.: #67770]	Observation	quinones: MK-9(H₂)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19800]	arabinose ChEBI	+
[Ref.: #29018]	arabinose ChEBI	+	carbon source
[Ref.: #19800]	cellulose ChEBI	+
[Ref.: #68379]	D-glucose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	D-ribose ChEBI	-	fermentation	* from API Coryne
[Ref.: #29018]	esculin ChEBI	+	hydrolysis
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #19800]	fructose ChEBI	+
[Ref.: #29018]	galactose ChEBI	+	carbon source
[Ref.: #68379]	gelatin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #19800]	glucose ChEBI	+
[Ref.: #29018]	glucose ChEBI	+	carbon source
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68379]	lactose ChEBI	+	fermentation	* from API Coryne
[Ref.: #29018]	maltose ChEBI	+	carbon source
[Ref.: #68379]	maltose ChEBI	+	fermentation	* from API Coryne
[Ref.: #19800]	mannitol ChEBI	+
[Ref.: #19800]	myo-inositol ChEBI	+
[Ref.: #123983]	nitrate ChEBI	-	reduction
[Ref.: #68379]	nitrate ChEBI	+	reduction	* from API Coryne
[Ref.: #123983]	nitrite ChEBI	-	reduction
[Ref.: #19800]	raffinose ChEBI	+
[Ref.: #19800]	rhamnose ChEBI	+
[Ref.: #29018]	rhamnose ChEBI	+	carbon source
[Ref.: #19800]	sucrose ChEBI	+
[Ref.: #29018]	sucrose ChEBI	+	carbon source
[Ref.: #68379]	sucrose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68379]	urea ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #19800]	xylose ChEBI	+
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #123983]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym, API Coryne
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API Coryne
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym, API Coryne
[Ref.: #68382]	beta-glucuronidase	+	3.2.1.31	* from API zym, API Coryne
[Ref.: #29018]	catalase	+	1.11.1.6
[Ref.: #123983]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #29018]	gelatinase	+
[Ref.: #68379]	gelatinase	+		* from API Coryne
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym, API Coryne
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #123983]	oxidase	-
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #123983]	urease	-	3.5.1.5
[Ref.: #68379]	urease	-	3.5.1.5	* from API Coryne
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #19800]	332	+	-	+	+	+	+	+	+	+	-	+	not determinedn.d.	+	-	+/-	-	+	+	+	-	not determinedn.d.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #19800]	624	not determinedn.d.	+	+	+	-	+	-	-	-	-	+	+	+	+	+	+	+	+	+	+

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	cellulose degradation	100	5 of 5
[Ref.: #66794]	myo-inositol biosynthesis	100	10 of 10
[Ref.: #66794]	cardiolipin biosynthesis	100	7 of 7
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	glycogen metabolism	100	5 of 5
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	starch degradation	100	10 of 10
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	phenylacetate degradation (aerobic)	100	5 of 5
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	aerobactin biosynthesis	100	1 of 1
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	vitamin K metabolism	100	5 of 5
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	metabolism of disaccharids	90.91	10 of 11
[Ref.: #66794]	Entner Doudoroff pathway	90	9 of 10
[Ref.: #66794]	threonine metabolism	90	9 of 10
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	molybdenum cofactor biosynthesis	88.89	8 of 9
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	chorismate metabolism	88.89	8 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	88.89	8 of 9
[Ref.: #66794]	peptidoglycan biosynthesis	86.67	13 of 15
[Ref.: #66794]	reductive acetyl coenzyme A pathway	85.71	6 of 7
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	vitamin B1 metabolism	84.62	11 of 13
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	selenocysteine biosynthesis	83.33	5 of 6
[Ref.: #66794]	glycolate and glyoxylate degradation	83.33	5 of 6
[Ref.: #66794]	NAD metabolism	83.33	15 of 18
[Ref.: #66794]	proline metabolism	81.82	9 of 11
[Ref.: #66794]	pentose phosphate pathway	81.82	9 of 11
[Ref.: #66794]	glycine betaine biosynthesis	80	4 of 5
[Ref.: #66794]	ethylmalonyl-CoA pathway	80	4 of 5
[Ref.: #66794]	factor 420 biosynthesis	80	4 of 5
[Ref.: #66794]	flavin biosynthesis	80	12 of 15
[Ref.: #66794]	heme metabolism	78.57	11 of 14
[Ref.: #66794]	glutamate and glutamine metabolism	78.57	22 of 28
[Ref.: #66794]	citric acid cycle	78.57	11 of 14
[Ref.: #66794]	valine metabolism	77.78	7 of 9
[Ref.: #66794]	leucine metabolism	76.92	10 of 13
[Ref.: #66794]	glycolysis	76.47	13 of 17
[Ref.: #66794]	gluconeogenesis	75	6 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	75	6 of 8
[Ref.: #66794]	dTDPLrhamnose biosynthesis	75	6 of 8
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	isoleucine metabolism	75	6 of 8
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	alanine metabolism	72.41	21 of 29
[Ref.: #66794]	histidine metabolism	72.41	21 of 29
[Ref.: #66794]	purine metabolism	72.34	68 of 94
[Ref.: #66794]	tetrahydrofolate metabolism	71.43	10 of 14
[Ref.: #66794]	glutathione metabolism	71.43	10 of 14
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	pyrimidine metabolism	71.11	32 of 45
[Ref.: #66794]	tryptophan metabolism	71.05	27 of 38
[Ref.: #66794]	lipid metabolism	70.97	22 of 31
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	urea cycle	69.23	9 of 13
[Ref.: #66794]	methionine metabolism	69.23	18 of 26
[Ref.: #66794]	degradation of sugar alcohols	68.75	11 of 16
[Ref.: #66794]	octane oxidation	66.67	2 of 3
[Ref.: #66794]	L-lactaldehyde degradation	66.67	2 of 3
[Ref.: #66794]	lysine metabolism	66.67	28 of 42
[Ref.: #66794]	4-hydroxymandelate degradation	66.67	6 of 9
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	d-mannose degradation	66.67	6 of 9
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	non-pathway related	65.79	25 of 38
[Ref.: #66794]	isoprenoid biosynthesis	65.38	17 of 26
[Ref.: #66794]	d-xylose degradation	63.64	7 of 11
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	cysteine metabolism	61.11	11 of 18
[Ref.: #66794]	4-hydroxyphenylacetate degradation	60	6 of 10
[Ref.: #66794]	lipoate biosynthesis	60	3 of 5
[Ref.: #66794]	oxidative phosphorylation	59.34	54 of 91
[Ref.: #66794]	arginine metabolism	58.33	14 of 24
[Ref.: #66794]	tyrosine metabolism	57.14	8 of 14
[Ref.: #66794]	propanol degradation	57.14	4 of 7
[Ref.: #66794]	carotenoid biosynthesis	54.55	12 of 22
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	kanosamine biosynthesis II	50	1 of 2
[Ref.: #66794]	degradation of hexoses	50	9 of 18
[Ref.: #66794]	resorcinol degradation	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	androgen and estrogen metabolism	50	8 of 16
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	phenol degradation	50	10 of 20
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	ascorbate metabolism	50	11 of 22
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	pantothenate biosynthesis	50	3 of 6
[Ref.: #66794]	biotin biosynthesis	50	2 of 4
[Ref.: #66794]	sulfate reduction	46.15	6 of 13
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	46.15	6 of 13
[Ref.: #66794]	lipid A biosynthesis	44.44	4 of 9
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	degradation of pentoses	42.86	12 of 28
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	3-phenylpropionate degradation	40	6 of 15
[Ref.: #66794]	gallate degradation	40	2 of 5
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	O-antigen biosynthesis	40	2 of 5
[Ref.: #66794]	D-cycloserine biosynthesis	40	2 of 5
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	polyamine pathway	39.13	9 of 23
[Ref.: #66794]	dolichyl-diphosphooligosaccharide biosynthesis	36.36	4 of 11
[Ref.: #66794]	vitamin B6 metabolism	36.36	4 of 11
[Ref.: #66794]	degradation of sugar acids	36	9 of 25
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	enterobactin biosynthesis	33.33	1 of 3
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	cyanate degradation	33.33	1 of 3
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	phenylpropanoid biosynthesis	30.77	4 of 13
[Ref.: #66794]	chlorophyll metabolism	27.78	5 of 18
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	toluene degradation	25	1 of 4
[Ref.: #66794]	catecholamine biosynthesis	25	1 of 4
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	25	1 of 4
[Ref.: #66794]	arachidonic acid metabolism	22.22	4 of 18
[Ref.: #66794]	allantoin degradation	22.22	2 of 9
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16492]	Sample type/isolated from	desert sand
[Ref.: #16492]	Geographic location (country and/or sea, region)	Xinjiang Province
[Ref.: #16492]	Country	China
[Ref.: #16492]	Country ISO 3 Code	CHN
[Ref.: #16492]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Desert sand
[Ref.: #67770]	Geographic location (country and/or sea, region)	Xinjiang Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From desert sand
[Ref.: #67771]	Geographic location (country and/or sea, region)	Xinjiang Province
[Ref.: #67771]	Country	China
[Ref.: #67771]	Country ISO 3 Code	CHN
[Ref.: #67771]	Continent	Asia

[Ref.: #123983]	Sample type/isolated from	Environment, Sand sample
[Ref.: #123983]	Geographic location (country and/or sea, region)	Xinjiang desert
[Ref.: #123983]	Country	China
[Ref.: #123983]	Country ISO 3 Code	CHN
[Ref.: #123983]	Continent	Asia
[Ref.: #123983]	Isolation date	2007
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Desert
#Environmental	#Terrestrial	#Sandy
#Condition	#Xerophilic	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU543662 (>99% sequence identity) for Kineococcus xinjiangensis from Microbeatlas

Aquatic Samples	6
Soil Samples	32
Animal Samples	8
Plant Samples	7
Total Samples	53

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16492]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #123983]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16492]	Kineococcus xinjiangensis strain S2-20 16S ribosomal RNA gene, partial sequence	EU543662	1385	ENA	512762 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Kineococcus xinjiangensis DSM 22857	GCA_002934625	contig	GenBank	512762 tax ID
[Ref.: #66792]	Kineococcus xinjiangensis strain DSM 22857	512762.3	wgs	PATRIC	512762 tax ID	*
[Ref.: #66792]	Kineococcus xinjiangensis DSM 22857	2731639219	draft	JGI IMG/M	512762 tax ID	*

[Ref.: #16492]	GC-content	77.8 mol%
[Ref.: #67770]	GC-content	77.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	74.6 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Kineococcus xinjiangensis strain DSM 22857 PATRIC: 512762.3
[Ref.: #69481]	spore-forming	no	98	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Kineococcus xinjiangensis strain DSM 22857 PATRIC: 512762.3
[Ref.: #69480]	gram-positive	yes	93.887	yes
[Ref.: #69480]	anaerobic	no	99.343	no
[Ref.: #69480]	halophile	no	80.546	no
[Ref.: #69480]	spore-forming	no	71.188	no
[Ref.: #69480]	glucose-util	yes	86.895	yes
[Ref.: #69480]	aerobic	yes	92.711	yes
[Ref.: #69480]	thermophile	no	98.148	no
[Ref.: #69480]	motile	yes	79.47	yes
[Ref.: #69480]	flagellated	no	86.887	no
[Ref.: #69480]	glucose-ferment	no	71.445	yes

Availability in culture collections External links

[Ref.: #16492]

Culture collection no.

DSM 22857, KCTC 19474, CCTCC AB 207179, JCM 16219, NBRC 107624, CIP 110123

[Ref.: #75793]

SI-ID 362801

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thalassiella azotovora gen. nov., sp. nov., a New Member of the Family Kineosporiaceae Isolated from Sea Water in South Korea.	Lee D, Jang JH, Cha S, Seo T	Curr Microbiol	10.1007/s00284-016-1112-y	2016	*
Phylogeny	Kineococcus glutineturens sp. nov., isolated from soil in Yunnan, south-west China.	Nie GX, Ming H, Zhang J, Feng HG, Li S, Yu TT, Zhou EM, Tang SK, Li WJ	Antonie Van Leeuwenhoek	10.1007/s10482-012-9731-1	2012	*
Phylogeny	Kineococcus xinjiangensis sp. nov., isolated from desert sand.	Liu M, Peng F, Wang Y, Zhang K, Chen G, Fang C	Int J Syst Evol Microbiol	10.1099/ijs.0.004168-0	2009	*

References

#16492

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22857

#19800

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29018

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25448 (see below)

#37919 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#75793

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID362801.1 )

#123983 Collection of Institut Pasteur ; Curators of the CIP; CIP 110123

#25448

IJSEM 1090 2009 ( DOI 10.1099/ijs.0.004168-0 , PubMed 19406798 )

* These data were automatically processed and therefore are not curated

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Kineococcus xinjiangensis strain DSM 22857

Kineococcus xinjiangensis strain DSM 22857

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