Name: Thioalkalibacter halophilus DSM 19224
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 6096

Type strain:

Species: Thioalkalibacter halophilus

Culture col. no.: DSM 19224, NCCB 100269, UNIQEM U263, ALCO 1

Strain history: <- D. Yu. Sorokin, Dept. Biotechnol., Delft Univ. Technol., Netherlands; ALCO 1

NCBI tax ID(s): 469656 (species)

SI-ID 404782

DSM 19224

Section

Thioalkalibacter halophilus DSM 19224 is an aerobe, mesophilic bacterium that was isolated from sediments from hypersaline alkaline lakes.

aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Chromatiales*
	Family	*Thioalkalibacteraceae*
	Genus	*Thioalkalibacter*
	Species	**Thioalkalibacter halophilus**
	Full Scientific Name (LPSN)	Thioalkalibacter halophilus Banciu et al. 2009

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7977]

Culture medium

THIOALKALIBACTER HALOPHILUS MEDIUM (DSMZ Medium 1225)

[Ref.: #7977]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #7977]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #7977]			growth	30 °C

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Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

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Oxygen tolerance

aerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7977]	Sample type/isolated from	sediments from hypersaline alkaline lakes
[Ref.: #7977]	Geographic location (country and/or sea, region)	South-Western Siberia, Altai
[Ref.: #7977]	Country	Russia
[Ref.: #7977]	Country ISO 3 Code	RUS
[Ref.: #7977]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Sediment
#Condition	#Alkaline	-
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU124668 (>99% sequence identity) for Thioalkalibacter halophilus subclade from Microbeatlas

Aquatic Samples	226
Soil Samples	27
Animal Samples	19
Plant Samples	1
Total Samples	273

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7977]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7977]	Thioalkalibacter halophilus strain ALCO1 16S ribosomal RNA gene, partial sequence	EU124668	1486	ENA	469656 tax ID

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GC-content

54.6 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #7977]

Culture collection no.

DSM 19224, NCCB 100269, UNIQEM U263, ALCO 1

[Ref.: #75584]

SI-ID 404782

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Influence of salts and pH on growth and activity of a novel facultatively alkaliphilic, extremely salt-tolerant, obligately chemolithoautotrophic sufur-oxidizing Gammaproteobacterium Thioalkalibacter halophilus gen. nov., sp. nov. from South-Western Siberian soda lakes.	Banciu HL, Sorokin DY, Tourova TP, Galinski EA, Muntyan MS, Kuenen JG, Muyzer G	Extremophiles	10.1007/s00792-008-0142-1	2008	*

References

#7977

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19224

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75584

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404782.1 )

* These data were automatically processed and therefore are not curated

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