Halomonas aquamarina (DSM 30161, ATCC 14400, KCTC 22193)

Name: Halomonas aquamarina (DSM 30161, ATCC 14400, KCTC 22193)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 6010

Type strain

Strain Designation 558

Culture col. no. DSM 30161 ATCC 14400 KCTC 22193 NCMB 557 CCUG 16157 15 more

NCBI tax ID(s) 77097

Special Collections DSMZ CCUG KCTC CIP

History DSMZ <- ATCC <- C.E. ZoBell, 558 (Achromobacter aquamarinus) KCTC <- DSM <- ATCC <- CE ZoBell, 558, `Achromobacter aquamarinus` CIP <- 1998, NCIMB <- C.E. Zobell: strain 558

Links

Halomonas aquamarina 558 is an aerobe, Gram-negative animal pathogen that was isolated from Seawater.

Gram-negative aerobe animal pathogen genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 92115

LMG 2853,ATCC 14400,LMG 3416,NCMB 557,NCIMB 557,IAM 12550,CCUG 16157,CIP 105454,LMD 73.17,CECT 5000,NCIB 557,BCRC 12878,CCRC 12878,CGMCC 1.2324,DSM 30161,VTT E-103156,KCTC 22193

@ref 20215

Last LPSN update 2026-05-29 08:26:18

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Oceanospirillales

Family Halomonadaceae

Genus Halomonas

Species Halomonas aquamarina

Full scientific name Halomonas aquamarina (ZoBell and Upham 1944) Dobson and Franzmann 1996

Synonyms (9)

"Achromobacter aquamarinus"
Vreelandella aquamarina
Alcaligenes aquamarinus
Alcaligenes aestus
Deleya aquamarina
Halomonas meridiana
Alcaligenes faecalis subsp. homari
Halomonas axialensis
Deleya aesta

BacDive ID	Other strains from **Halomonas aquamarina** (2)	Type strain
6009	H. aquamarina DSM 4739, ATCC 27128, JCM 20631, CECT 4265, ...
143013	H. aquamarina CCUG 16158, ATCC 33127, LMG 3339, IAM 12645, ...

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
67771	negative
116427	negative	rod-shaped
125439	negative		93.89
125438	negative		99.5

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
40144	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
9171	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
116427	CIP Medium 13	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
9171	positive	growth	25
40144	positive	growth	25
46452	positive	growth	20
67771	positive	growth	26
116427	positive	growth	5-30
116427	negative	growth	37
116427	negative	growth	41
116427	negative	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
67771	aerobe
125439	obligate aerobe	94.485

Spore formation

@ref	Spore formation	Confidence
125438		90.471
125439		99.711

Halophily

@ref	Salt	Growth	Tested relation	Concentration
116427	NaCl	positive	growth	6-10 %
116427	NaCl		growth	0 %
116427	NaCl		growth	2 %
116427	NaCl		growth	4 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
116427	4853 ChEBI	esculin	-	hydrolysis
116427	606565 ChEBI	hippurate	-	hydrolysis
116427	17632 ChEBI	nitrate	-	builds gas from
116427	17632 ChEBI	nitrate	+	reduction
116427	16301 ChEBI	nitrite	-	builds gas from
116427	16301 ChEBI	nitrite	-	reduction

Metabolite production

@ref	Chebi-ID	Metabolite	Production
116427	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
116427	15688 ChEBI	acetoin	-
116427	17234 ChEBI	glucose		-

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116427	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116427	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
116427	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116427	caseinase	-	3.4.21.50
116427	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116427	gamma-glutamyltransferase	+	2.3.2.2
116427	gelatinase	+/-
116427	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
116427	lipase	-
68382	lipase (C 14)	-		from API zym
116427	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116427	ornithine decarboxylase	-	4.1.1.17
116427	oxidase	+
116427	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
116427	tryptophan deaminase	-
116427	tween esterase	-
116427	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116427	-	+	+	+	-	+	+	-	-	-	+	+	-	-	-	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116427	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine

Isolation

@ref	Sample type
46452	Seawater
116427	Environment, Sea water

Taxonmaps

69479

Global distribution of 16S sequence AJ306888 (>99% sequence identity) for Halomonas from Microbeatlas

Aquatic Samples	5177
Soil Samples	435
Animal Samples	4415
Plant Samples	138
Total Samples	10165

Interaction and safety

Risk assessment

@ref	Pathogenicity animal	Biosafety level	Biosafety level comment
9171		1	Risk group (German classification) According to TRBA 466
116427		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	IMG-taxon 2639762508 annotated assembly for Vreelandella aquamarina 558	scaffold	GCA_900110265	77097.4	2639762508	77097	53.46

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Deleya aquamarina (ATCC 14400) 16S ribosomal RNA (16S rRNA) gene	M93352	1466	77097
20218	Halomonas aquamarina partial 16S rRNA gene, strain DSM 30161	AJ306888	1528	77097
124043	Halomonas aquamarina strain DSM 30161 16S ribosomal RNA gene, partial sequence.	MH283883	1474	77097
124043	Halomonas aquamarina strain DSM 30161 16S ribosomal RNA gene, partial sequence.	MN901182	639	77097
124043	Halomonas aquamarina strain DSM 30161 16S ribosomal RNA gene, partial sequence.	MK185035	690	77097
124043	Halomonas aquamarina strain DSM 30161 16S ribosomal RNA gene, partial sequence.	MW198161	601	77097

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2639762508 annotated assembly for Vreelandella aquamarina 558
NCBI: GCA_900110265

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	94.49	no
125439	gram_stain	BacteriaNetⓘ	negative	93.89	no
125439	motility	BacteriaNetⓘ	yes	73.97	no
125439	spore_formation	BacteriaNetⓘ	no	99.71	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Halomonas aquamarina 558
NCBI: GCA_900110265.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.50	yes
125438	anaerobic	anaerobicⓘ	no	94.95	yes
125438	aerobic	aerobicⓘ	yes	84.39	yes
125438	spore-forming	spore-formingⓘ	no	90.47	no
125438	thermophilic	thermophileⓘ	no	98.25	yes
125438	flagellated	motile2+ⓘ	yes	80.98	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	The diversity of PAH-degrading bacteria in a deep-sea water column above the Southwest Indian Ridge.	Yuan J, Lai Q, Sun F, Zheng T, Shao Z.	Front Microbiol	10.3389/fmicb.2015.00853	2015
Enzymology	Depth-Resolved Variations of Cultivable Bacteria and Their Extracellular Enzymes in the Water Column of the New Britain Trench.	Liu Q, Fang J, Li J, Zhang L, Xie BB, Chen XL, Zhang YZ.	Front Microbiol	10.3389/fmicb.2018.00135	2018
Metabolism	Bioactive Bromotyrosine Derivatives from the Pacific Marine Sponge Suberea clavata (Pulitzer-Finali, 1982).	Moriou C, Lacroix D, Petek S, El-Demerdash A, Trepos R, Leu TM, Florean C, Diederich M, Hellio C, Debitus C, Al-Mourabit A.	Mar Drugs	10.3390/md19030143	2021
	Peptides from Marine-Derived Fungi: Chemistry and Biological Activities.	Hafez Ghoran S, Taktaz F, Sousa E, Fernandes C, Kijjoa A.	Mar Drugs	10.3390/md21100510	2023
Metabolism	Antimicrobial and cytotoxic assessment of marine cyanobacteria - Synechocystis and Synechococcus.	Martins RF, Ramos MF, Herfindal L, Sousa JA, Skaerven K, Vasconcelos VM.	Mar Drugs	10.3390/md6010001	2008
	Natural Benzo/Acetophenones as Leads for New Synthetic Acetophenone Hybrids Containing a 1,2,3-Triazole Ring as Potential Antifouling Agents.	Neves AR, Pereira D, Goncalves C, Cardoso J, Pinto E, Vasconcelos V, Pinto M, Sousa E, Almeida JR, Cidade H, Correia-da-Silva M.	Mar Drugs	10.3390/md19120682	2021
	From Natural Xanthones to Synthetic C-1 Aminated 3,4-Dioxygenated Xanthones as Optimized Antifouling Agents.	Resende DISP, Almeida JR, Pereira S, Campos A, Lemos A, Plowman JE, Thomas A, Clerens S, Vasconcelos V, Pinto M, Correia-da-Silva M, Sousa E.	Mar Drugs	10.3390/md19110638	2021
Pathogenicity	A Multi-Bioassay Integrated Approach to Assess the Antifouling Potential of the Cyanobacterial Metabolites Portoamides.	Antunes J, Pereira S, Ribeiro T, Plowman JE, Thomas A, Clerens S, Campos A, Vasconcelos V, Almeida JR.	Mar Drugs	10.3390/md17020111	2019
Pathogenicity	Flavonoid Glycosides with a Triazole Moiety for Marine Antifouling Applications: Synthesis and Biological Activity Evaluation.	Pereira D, Goncalves C, Martins BT, Palmeira A, Vasconcelos V, Pinto M, Almeida JR, Correia-da-Silva M, Cidade H.	Mar Drugs	10.3390/md19010005	2020
	Antifouling potential of Nature-inspired sulfated compounds.	Almeida JR, Correia-da-Silva M, Sousa E, Antunes J, Pinto M, Vasconcelos V, Cunha I.	Sci Rep	10.1038/srep42424	2017
	Cyanobacteria and Eukaryotic Microalgae as Emerging Sources of Antibacterial Peptides.	Rojas V, Rivas L, Cardenas C, Guzman F.	Molecules	10.3390/molecules25245804	2020
	The Marine Seagrass Halophila stipulacea as a Source of Bioactive Metabolites against Obesity and Biofouling.	Bel Mabrouk S, Reis M, Sousa ML, Ribeiro T, Almeida JR, Pereira S, Antunes J, Rosa F, Vasconcelos V, Achour L, Kacem A, Urbatzka R.	Mar Drugs	10.3390/md18020088	2020
	Revolutionizing cancer treatment with Halomonas Aquamarina L-Glutaminase: insights from in vitro and computational studies.	Abdelsayed S, Elmetwalli A, Hassan J, Monem MOA, El-Far AH, Ameen F, Hassan MG.	Sci Rep	10.1038/s41598-025-14230-6	2025
	Structure and antiproliferative activity of the polysaccharide from Halomonas aquamarina related to Cobetia pacifica.	Kokoulin MS, Sigida EN, Kuzmich AS, Ibrahim IM, Fedonenko YP, Konnova SA.	Carbohydr Polym	10.1016/j.carbpol.2022.120125	2022
	One Strain Many Compounds Approach for Anti-Trypanosoma cruzi Compounds: Empowering the Marine Bacterium Metabacillus indicus.	Andrade BA, Dos Santos AL, Ferreira DAS, Abiuzi MB, Vieira DP, Goncalves MM, Lago JHG, Sartorelli P, Tempone AG.	ACS Omega	10.1021/acsomega.4c10784	2025
	[Screening and evaluation of saline-alkali-tolerant and growth-promoting bacteria].	Sun X, Dong Y, Wang N, Cui W, Liao X, Liu L.	Sheng Wu Gong Cheng Xue Bao	10.13345/j.cjb.190519	2020
Metabolism	Production, characterization and antimicrobial activities of bio-pigments by Aquisalibacillus elongatus MB592, Salinicoccus sesuvii MB597, and Halomonas aquamarina MB598 isolated from Khewra Salt Range, Pakistan.	Fariq A, Yasmin A, Jamil M.	Extremophiles	10.1007/s00792-019-01095-7	2019
	Saturated Iso-Type Fatty Acids from the Marine Bacterium Mesoflavibacter zeaxanthinifaciens with Anti-Trypanosomal Potential.	Santos Ferreira DA, de Castro Levatti EV, Santa Cruz LM, Costa AR, Migotto AE, Yamada AY, Camargo CH, Christodoulides M, Lago JHG, Tempone AG.	Pharmaceuticals (Basel)	10.3390/ph17040499	2024
	Novel Halotolerant Bacteria from Saline Environments: Isolation and Biomolecule Production.	Neagu S, Stancu MM.	BioTech (Basel)	10.3390/biotech14020049	2025
	Identification of a New Compound (4-Fluoro-2-Trifluoromethyl Imidazole) Extracted from a New Halophilic Bacillus aquimaris Strain Persiangulf TA2 Isolated from the Northern Persian Gulf with Broad-Spectrum Antimicrobial Effect	Taghavi S, Abbasi Montazeri E, Zekavati R, Roomiani l, Saffarian P.	Iran J Biotechnol		2023
Phylogeny	Bacterial biofilm development during experimental degradation of Melicertus kerathurus exoskeleton in seawater.	Xaxiri NA, Nikouli E, Berillis P, Kormas KA.	AIMS Microbiol	10.3934/microbiol.2018.3.397	2018
	The Novel Yersinia enterocolitica Telomere Phage vB_YenS_P840 Is Closely Related to PY54, but Reveals Some Striking Differences.	Brauer JA, Hammerl JA, El-Mustapha S, Fuhrmann J, Barac A, Hertwig S.	Viruses	10.3390/v15102019	2023
Metabolism	Enhanced haloarchaeal oil removal in hypersaline environments via organic nitrogen fertilization and illumination.	Al-Mailem DM, Eliyas M, Radwan SS.	Extremophiles	10.1007/s00792-012-0471-y	2012
Pathogenicity	In-Depth In Silico Search for Cuttlefish (Sepia officinalis) Antimicrobial Peptides Following Bacterial Challenge of Haemocytes.	Benoist L, Houyvet B, Henry J, Corre E, Zanuttini B, Zatylny-Gaudin C.	Mar Drugs	10.3390/md18090439	2020
Metabolism	Biofilm formation in moderately halophilic bacteria is influenced by varying salinity levels.	Qurashi AW, Sabri AN.	J Basic Microbiol	10.1002/jobm.201100253	2012
Genetics	A long-awaited taxogenomic investigation of the family Halomonadaceae.	de la Haba RR, Arahal DR, Sanchez-Porro C, Chuvochina M, Wittouck S, Hugenholtz P, Ventosa A.	Front Microbiol	10.3389/fmicb.2023.1293707	2023
	16S rDNA sequence analysis of culturable marine biofilm forming bacteria from a ship's hull.	Inbakandan D, Murthy PS, Venkatesan R, Khan SA.	Biofouling	10.1080/08927014.2010.530347	2010
Metabolism	N15: the linear phage-plasmid.	Ravin NV.	Plasmid	10.1016/j.plasmid.2010.12.004	2011
Phylogeny	Gammaproteobacteria occurrence and microdiversity in Tyrrhenian Sea sediments as revealed by cultivation-dependent and -independent approaches.	Ettoumi B, Bouhajja E, Borin S, Daffonchio D, Boudabous A, Cherif A.	Syst Appl Microbiol	10.1016/j.syapm.2010.02.005	2010
	A cross-sectional study on occupational exposure to microorganisms, endotoxin, hydrogen sulfide, and dust during work at drilling waste treatment plants.	Daae HL, Graff P, Foss OAH, Kofoed VC, Afanou AK, Frederiksen MW, Madsen AM.	Ann Work Expo Health	10.1093/annweh/wxad069	2024
	Optimization and multiple in vitro activity potentials of carotenoids from marine Kocuria sp. RAM1.	Metwally RA, El-Sersy NA, El Sikaily A, Sabry SA, Ghozlan HA.	Sci Rep	10.1038/s41598-022-22897-4	2022
	Isolation and Characterisation of the Agarolytic Bacterium Pseudoalteromonas Ruthenica.	Khalifa A, Aldayel M.	Open Life Sci	10.1515/biol-2019-0066	2019
	Endorhizosphere of indigenous succulent halophytes: a valuable resource of plant growth promoting bacteria.	Dragojevic M, Stankovic N, Djokic L, Raicevic V, Jovicic-Petrovic J.	Environ Microbiome	10.1186/s40793-023-00477-x	2023
Phylogeny	Phylogenetic relationships within the family Halomonadaceae based on comparative 23S and 16S rRNA gene sequence analysis.	de la Haba RR, Arahal DR, Marquez MC, Ventosa A.	Int J Syst Evol Microbiol	10.1099/ijs.0.013979-0	2010
	Micrococcus lylae MW407006 Pigment: Production, Optimization, Nano-Pigment Synthesis, and Biological Activities.	Shahin YH, Elwakil BH, Ghareeb DA, Olama ZA.	Biology (Basel)	10.3390/biology11081171	2022
Enzymology	Bio-invasive ascidians in Ireland: A threat for the shellfish industry but also a source of high added value products.	Palanisamy SK, Thomas OP, P McCormack G.	Bioengineered	10.1080/21655979.2017.1392421	2018
	Factors affecting the production of sugarcane yield and sucrose accumulation: suggested potential biological solutions.	Mehdi F, Cao Z, Zhang S, Gan Y, Cai W, Peng L, Wu Y, Wang W, Yang B.	Front Plant Sci	10.3389/fpls.2024.1374228	2024
Phylogeny	The nomenclatural type of the genus Deleya and the consequences of Deleya aesta and Alcaligenes aquamarinus being synonyms.	Tindall BJ.	Int J Syst Evol Microbiol	10.1099/ijs.0.02530-0	2003
	Metabolomic Strategies to Improve Chemical Information from OSMAC Studies of Endophytic Fungi.	da Silva FMR, Paggi GM, Brust FR, Macedo AJ, Silva DB.	Metabolites	10.3390/metabo13020236	2023
Genetics	Intermediate-Salinity Systems at High Altitudes in the Peruvian Andes Unveil a High Diversity and Abundance of Bacteria and Viruses.	Castelan-Sanchez HG, Elorrieta P, Romoacca P, Linan-Torres A, Sierra JL, Vera I, Batista-Garcia RA, Tenorio-Salgado S, Lizama-Uc G, Perez-Rueda E, Quispe-Ricalde MA, Davila-Ramos S.	Genes (Basel)	10.3390/genes10110891	2019
	Evaluation of marine bacterial lysogens for development of a marine prophage induction assay.	McDaniel L, Griffin DW, Crespo-Gomez J, McLaughlin MR, Paul JH.	Mar Biotechnol (NY)	10.1007/s10126-001-0056-8	2001
Pathogenicity	Quorum Sensing Inhibitory and Antifouling Activities of New Bromotyrosine Metabolites from the Polynesian Sponge Pseudoceratina n. sp.	Tintillier F, Moriou C, Petek S, Fauchon M, Hellio C, Saulnier D, Ekins M, Hooper JNA, Al-Mourabit A, Debitus C.	Mar Drugs	10.3390/md18050272	2020
	Ecological Succession of Sulfur-Oxidizing Epsilon- and Gammaproteobacteria During Colonization of a Shallow-Water Gas Vent.	Patwardhan S, Foustoukos DI, Giovannelli D, Yucel M, Vetriani C.	Front Microbiol	10.3389/fmicb.2018.02970	2018
Phylogeny	Proteobacteria from the human skin microbiota: Species-level diversity and hypotheses.	Cosseau C, Romano-Bertrand S, Duplan H, Lucas O, Ingrassia I, Pigasse C, Roques C, Jumas-Bilak E.	One Health	10.1016/j.onehlt.2016.02.002	2016
Phylogeny	Evaluation of disease resistance and tolerance to elevated temperature stress of the selected tissue-cultured Kappaphycus alvarezii Doty 1985 under optimized laboratory conditions.	Azizi A, Mohd Hanafi N, Basiran MN, Teo CH.	3 Biotech	10.1007/s13205-018-1354-4	2018
	Phenotypic characterization and 16S rDNA identification of culturable non-obligate halophilic bacterial communities from a hypersaline lake, La Sal del Rey, in extreme South Texas (USA).	Phillips K, Zaidan F, Elizondo OR, Lowe KL.	Aquat Biosyst	10.1186/2046-9063-8-5	2012
	Multi-domain probiotic consortium as an alternative to chemical remediation of oil spills at coral reefs and adjacent sites.	Silva DP, Villela HDM, Santos HF, Duarte GAS, Ribeiro JR, Ghizelini AM, Vilela CLS, Rosado PM, Fazolato CS, Santoro EP, Carmo FL, Ximenes DS, Soriano AU, Rachid CTCC, Vega Thurber RL, Peixoto RS.	Microbiome	10.1186/s40168-021-01041-w	2021
Metabolism	Removal of Soluble Strontium via Incorporation into Biogenic Carbonate Minerals by Halophilic Bacterium Bacillus sp. Strain TK2d in a Highly Saline Solution.	Horiike T, Dotsuta Y, Nakano Y, Ochiai A, Utsunomiya S, Ohnuki T, Yamashita M.	Appl Environ Microbiol	10.1128/aem.00855-17	2017
Enzymology	Identification and Initial Characterization of Prophages in Vibrio campbellii.	Lorenz N, Reiger M, Toro-Nahuelpan M, Brachmann A, Poettinger L, Plener L, Lassak J, Jung K.	PLoS One	10.1371/journal.pone.0156010	2016
	Bacterial Abundance and Community Composition in Pond Water From Shrimp Aquaculture Systems With Different Stocking Densities.	Alfiansah YR, Hassenruck C, Kunzmann A, Taslihan A, Harder J, Gardes A.	Front Microbiol	10.3389/fmicb.2018.02457	2018
	The temperate marine phage PhiHAP-1 of Halomonas aquamarina possesses a linear plasmid-like prophage genome.	Mobberley JM, Authement RN, Segall AM, Paul JH.	J Virol	10.1128/jvi.00140-08	2008
Phylogeny	Microbial communities in the chemocline of a hypersaline deep-sea basin (Urania basin, Mediterranean Sea).	Sass AM, Sass H, Coolen MJ, Cypionka H, Overmann J.	Appl Environ Microbiol	10.1128/aem.67.12.5392-5402.2001	2001
	Marine amphiphilic siderophores: marinobactin structure, uptake, and microbial partitioning.	Martinez JS, Butler A.	J Inorg Biochem	10.1016/j.jinorgbio.2007.07.007	2007
	Function, expression, specificity, diversity and incompatibility of actinobacteriophage parABS systems.	Dedrick RM, Mavrich TN, Ng WL, Cervantes Reyes JC, Olm MR, Rush RE, Jacobs-Sera D, Russell DA, Hatfull GF.	Mol Microbiol	10.1111/mmi.13414	2016
	Protein-Mediated and RNA-Based Origins of Replication of Extrachromosomal Mycobacterial Prophages.	Wetzel KS, Aull HG, Zack KM, Garlena RA, Hatfull GF.	mBio	10.1128/mbio.00385-20	2020
	Sulfated Non-Saccharide Glycosaminoglycan Mimetics as Novel Drug Discovery Platform for Various Pathologies.	Afosah DK, Al-Horani RA.	Curr Med Chem	10.2174/0929867325666181120101147	2020
Phylogeny	Characterization of Halomonas sp. ZM3 isolated from the Zelazny Most post-flotation waste reservoir, with a special focus on its mobile DNA.	Dziewit L, Pyzik A, Matlakowska R, Baj J, Szuplewska M, Bartosik D.	BMC Microbiol	10.1186/1471-2180-13-59	2013
Enzymology	Characterization of a new plasmid-like prophage in a pandemic Vibrio parahaemolyticus O3:K6 strain.	Lan SF, Huang CH, Chang CH, Liao WC, Lin IH, Jian WN, Wu YG, Chen SY, Wong HC.	Appl Environ Microbiol	10.1128/aem.02483-08	2009
Metabolism	Characterization of Halomonas sp. strain H11 alpha-glucosidase activated by monovalent cations and its application for efficient synthesis of alpha-D-glucosylglycerol.	Ojima T, Saburi W, Yamamoto T, Kudo T.	Appl Environ Microbiol	10.1128/aem.07514-11	2012
	Diversity of Bacillus-like organisms isolated from deep-sea hypersaline anoxic sediments.	Sass AM, McKew BA, Sass H, Fichtel J, Timmis KN, McGenity TJ.	Saline Syst	10.1186/1746-1448-4-8	2008
Phylogeny	Culture-independent analysis of gut bacteria: the pig gastrointestinal tract microbiota revisited.	Leser TD, Amenuvor JZ, Jensen TK, Lindecrona RH, Boye M, Moller K.	Appl Environ Microbiol	10.1128/aem.68.2.673-690.2002	2002
Metabolism	Sphaerocyclamide, a prenylated cyanobactin from the cyanobacterium Sphaerospermopsis sp. LEGE 00249.	Martins J, Leikoski N, Wahlsten M, Azevedo J, Antunes J, Jokela J, Sivonen K, Vasconcelos V, Fewer DP, Leao PN	Sci Rep	10.1038/s41598-018-32618-5	2018
Phylogeny	Phylogenetic analysis of psychrophilic bacteria isolated from the Japan Trench, including a description of the deep-sea species Psychrobacter pacificensis sp. nov.	Maruyama A, Honda D, Yamamoto H, Kitamura K, Higashihara T.	Int J Syst Evol Microbiol	10.1099/00207713-50-2-835	2000
Phylogeny	Halomonas piezotolerans sp. nov., a multiple-stress-tolerant bacterium isolated from a deep-sea sediment sample of the New Britain Trench.	Yan F, Fang J, Cao J, Wei Y, Liu R, Wang L, Xie Z	Int J Syst Evol Microbiol	10.1099/ijsem.0.004069	2020
Phylogeny	Halomonas songnenensis sp. nov., a moderately halophilic bacterium isolated from saline and alkaline soils.	Jiang J, Pan Y, Hu S, Zhang X, Hu B, Huang H, Hong S, Meng J, Li C, Wang K	Int J Syst Evol Microbiol	10.1099/ijs.0.056499-0	2014
Phylogeny	Halomonas andesensis sp. nov., a moderate halophile isolated from the saline lake Laguna Colorada in Bolivia.	Guzman D, Quillaguaman J, Munoz M, Hatti-Kaul R	Int J Syst Evol Microbiol	10.1099/ijs.0.014522-0	2009

References

#9171	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 30161
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40144	; Curators of the CIP;
#46452	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 16157
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116427	Collection of Institut Pasteur ; Curators of the CIP; CIP 105454
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Halomonas aquamarina (DSM 30161, ATCC 14400, KCTC 22193)

Name and taxonomic classification

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Physiology and metabolism

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