Name: Gelidibacter mesophilus 2SM28
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 5599

Type strain:

Species: Gelidibacter mesophilus

Strain Designation: 2SM28

Culture col. no.: DSM 14094, CECT 5104

Strain history: <- CECT <- M. J. Pujalte; 2SM28

NCBI tax ID(s): 169050 (species)

SI-ID 87843

CECT 5104, DSM 14094

Other strains from Gelidibacter mesophilus

G. mesophilus 2SM29, DSM 14095, ATCC BAA-813, ... (type strain)

Section

Gelidibacter mesophilus 2SM28 is a bacterium that was isolated from sea water.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Gelidibacter*
	Species	**Gelidibacter mesophilus**
	Full Scientific Name (LPSN)	Gelidibacter mesophilus Macián et al. 2002

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5231]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #5231]

Culture medium growth

[Ref.: #5231]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5231]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5231]			growth	20-25 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5231]	Sample type/isolated from	sea water
[Ref.: #5231]	Geographic location (country and/or sea, region)	Valencia
[Ref.: #5231]	Country	Spain
[Ref.: #5231]	Country ISO 3 Code	ESP
[Ref.: #5231]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ344134 (>99% sequence identity) for Gelidibacter mesophilus subclade from Microbeatlas

Aquatic Samples	485
Soil Samples	53
Animal Samples	312
Plant Samples	6
Total Samples	856

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5231]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5231]	Gelidibacter mesophilus partial 16S rRNA gene, strain 2SM28	AJ344134	1511	ENA	169050 tax ID

[Ref.: #5231]

GC-content

38.8-40.3 mol%

Availability in culture collections External links

[Ref.: #5231]

Culture collection no.

DSM 14094, CECT 5104

[Ref.: #75081]

SI-ID 87843

References

#5231

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14094

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75081

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID87843.1 )

* These data were automatically processed and therefore are not curated

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