Pseudoalteromonas fuliginea (DSM 15748, CIP 105339, KMM 216)

Name: Pseudoalteromonas fuliginea (DSM 15748, CIP 105339, KMM 216)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 448

Type strain

Variant Isotype of BacDive ID 131095

Culture col. no. DSM 15748 CIP 105339 KMM 216

NCBI tax ID(s) 1872678

Special Collections DSMZ CIP Literature strains

History <- L. A. Romanenko, Pacific Inst. Bioorg. Chem., RAS, Vladivostok; KMM 216 CIP <- 1997, E. Ivanova, Sci. Acad., Vladivostok, Russia <- L.A. Romanenko

Links

Pseudoalteromonas fuliginea DSM 15748 is an obligate aerobe, Gram-negative, motile bacterium that forms circular colonies and has a brown pigmentation.

Gram-negative motile rod-shaped colony-forming pigmented obligate aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 67257

DSM 12748,CIP 105339,DSM 15748

@ref 20215

Last LPSN update 2026-02-09 11:17:52

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Pseudoalteromonadaceae

Genus Pseudoalteromonas

Species Pseudoalteromonas fuliginea

Full scientific name Pseudoalteromonas fuliginea (Romanenko et al. 1995) Machado et al. 2016

Synonyms (1)

Alteromonas fuliginea

BacDive ID	Other strains from **Pseudoalteromonas fuliginea** (1)	Type strain
131095	P. fuliginea DSM 12748, CIP 105339, KMM 216

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Flagellum arrangement	Confidence
43169	negative	1.5-3.0 µm	0.5-0.8 µm	rod-shaped	polar
119481	negative			rod-shaped
125439	negative					99.5
125438						91.591
125438	negative					100

Colony morphology

@ref	Type of hemolysis	Colony size	Colony color	Colony shape	Medium used
43169	gamma	3-5 mm	black to dark brown	circular	MA

Pigmentation

@ref	Production	Color	Name
43169		brown	melanin pigment

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6098	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
42003	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
43169	Marine agar (MA)

Culture temp

@ref	Growth	Type	Temperature (°C)
6098	positive	growth	28
42003	positive	growth	25
43169	negative	growth	35
43169	positive	growth	5-30
119481	positive	growth	5-37
119481	negative	growth	41

Culture pH

@ref	Ability	Type	PH	PH range
43169	positive	optimum	7.5-8.5
43169	positive	growth	6-9	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
43169	obligate aerobe
119481	obligate aerobe
125439	obligate aerobe	99

Spore formation

@ref	Type of spore	Spore formation	Confidence
43169	spore
125439			99.3

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43169	NaCl	positive	growth	1-9 %(w/v)
119481	NaCl	positive	growth	4-8 %
119481	NaCl		growth	0 %
119481	NaCl		growth	2 %
119481	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43169		2-oxogluconate	+	carbon source
43169	30089 ChEBI	acetate	+	carbon source
43169	17128 ChEBI	adipate	+/-	assimilation
43169	2509 ChEBI	agar	+	hydrolysis
43169	40585 ChEBI	alpha-cyclodextrin	+	carbon source
43169	17665 ChEBI	alpha-D-glucose 6-phosphate	+	carbon source
43169	3435 ChEBI	carrageenan	+	hydrolysis
43169		casein	+	hydrolysis
43169	17057 ChEBI	cellobiose	+	carbon source
43169	16947 ChEBI	citrate	+	carbon source
43169	15824 ChEBI	D-fructose	-	growth
43169	12936 ChEBI	D-galactose	+	carbon source
43169	18024 ChEBI	D-galacturonic acid	+	carbon source
43169	8391 ChEBI	D-gluconate	+	carbon source
43169	17634 ChEBI	D-glucose	+	carbon source
43169	14314 ChEBI	D-glucose 6-phosphate	+	carbon source
43169	16899 ChEBI	D-mannitol	+	carbon source
43169	16024 ChEBI	D-mannose	+	carbon source
43169	27689 ChEBI	decanoate	-	assimilation
43169	23652 ChEBI	dextrin	+	carbon source
119481	4853 ChEBI	esculin	-	hydrolysis
43169	28066 ChEBI	gentiobiose	+	carbon source
43169	28087 ChEBI	glycogen	+	carbon source
43169	73784 ChEBI	glycyl-l-glutamate	+	carbon source
43169	17596 ChEBI	inosine	+	carbon source
43169	21217 ChEBI	L-alaninamide	+	carbon source
43169	16977 ChEBI	L-alanine	+	carbon source
43169	73786 ChEBI	L-alanylglycine	+	carbon source
43169	30849 ChEBI	L-arabinose	+/-	assimilation
43169	16467 ChEBI	L-arginine	+	carbon source
43169	17196 ChEBI	L-asparagine	+	carbon source
43169	29985 ChEBI	L-glutamate	+	carbon source
43169	17203 ChEBI	L-proline	+	carbon source
43169	90603 ChEBI	L-serine 2-naphthylamide	+	carbon source
43169	16857 ChEBI	L-threonine	+	carbon source
43169	17716 ChEBI	lactose	+	carbon source
43169	6359 ChEBI	lactulose	+	carbon source
43169	25115 ChEBI	malate	+	assimilation
43169	17306 ChEBI	maltose	+	carbon source
43169	28053 ChEBI	melibiose	+	carbon source
43169	506227 ChEBI	N-acetylglucosamine	-	growth
43169	506227 ChEBI	N-acetylglucosamine	-	assimilation
43169	17632 ChEBI	nitrate	+/-	reduction
119481	17632 ChEBI	nitrate	-	reduction
119481	16301 ChEBI	nitrite	-	reduction
43169	18401 ChEBI	phenylacetate	-	assimilation
43169	32032 ChEBI	potassium gluconate	-	assimilation
43169	17272 ChEBI	propionate	+	carbon source
43169	15361 ChEBI	pyruvate	-	growth
43169	16634 ChEBI	raffinose	+	carbon source
43169	53258 ChEBI	sodium citrate	-	assimilation
43169	30911 ChEBI	sorbitol	+	carbon source
43169	30911 ChEBI	sorbitol	-	growth
43169	30031 ChEBI	succinate	+	carbon source
43169	17992 ChEBI	sucrose	+	carbon source
43169	27082 ChEBI	trehalose	+	carbon source
43169	53423 ChEBI	tween 40	+	carbon source
43169	53426 ChEBI	tween 80	+	carbon source
43169	16704 ChEBI	uridine	+	carbon source
43169	18222 ChEBI	xylose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43169	35581 ChEBI	indole
119481	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
43169	acid phosphatase	+	3.1.3.2
68382	acid phosphatase	+	3.1.3.2	from API zym
43169	agarase	+	3.2.1.81
119481	alcohol dehydrogenase	+	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
43169	alpha-galactosidase	-	3.2.1.22
68382	alpha-galactosidase	-	3.2.1.22	from API zym
43169	alpha-glucosidase	-	3.2.1.20
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
43169	amylase	+
43169	arginine dihydrolase	-	3.5.3.6
43169	beta-galactosidase	+	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
119481	beta-galactosidase	+	3.2.1.23
43169	beta-glucosidase	+	3.2.1.21
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
43169	caseinase	-	3.4.21.50
119481	caseinase	+	3.4.21.50
43169	catalase	+	1.11.1.6
119481	catalase	+	1.11.1.6
43169	chitinase	-	3.2.1.14
43169	cystine arylamidase	-	3.4.11.3
68382	cystine arylamidase	-	3.4.11.3	from API zym
43169	cytochrome oxidase	+	1.9.3.1
43169	esterase (C 4)	+
68382	esterase (C 4)	-		from API zym
43169	esterase Lipase (C 8)	+
68382	esterase lipase (C 8)	+		from API zym
119481	gelatinase	+
119481	lecithinase	+
43169	leucine arylamidase	-	3.4.11.1
68382	leucine arylamidase	+	3.4.11.1	from API zym
119481	lipase	+
43169	lipase (C 14)	+
68382	lipase (C 14)	-		from API zym
119481	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119481	ornithine decarboxylase	-	4.1.1.17
119481	oxidase	+
43169	protease	+
43169	trypsin	-	3.4.21.4
68382	trypsin	-	3.4.21.4	from API zym
119481	tryptophan deaminase	-
119481	tween esterase	+
43169	urease	+	3.5.1.5
119481	urease	-	3.5.1.5
43169	valine arylamidase	+
68382	valine arylamidase	+		from API zym

Fatty acid profile

Metadata FA analysis

@ref

43169

Fatty acid	Percentage
C16:1ω7c / C16:1ω6c	39.1
C16:0	19.1
C18:1ω7c / C18:1ω6c	10.5
C12:0 3OH	6.9
C17:1ω8c	6.6
C17:0	2.8
C18:0	2.4
C12:0	1.3
C18:1ω9c	1.2

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119481	-	+	-	+	-	+	+	-	-	-	+	+	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Host	#Invertebrates (Other)	#Tunicata

Isolation

@ref	Sample type	Host species	Geographic location	Country	Continent	Isolation date
6098	ascidian Halocynthia aurantium	Halocynthia aurantium	Sea of Japan	International waters	Asia
43169	homogenate of purple sea squirt Halocynthia aurantium inhabiting the coastal waters of Peter the Great Bay		Peter the Great Bay, Sea of Japan
119481	Ascidian Halocynthia aurantium			Sea of Japan		1990

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6098	1	Risk group (German classification) According to TRBA 466
119481	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Afuliginea assembly for Pseudoalteromonas fuliginea KMM 216	contig	GCA_000690055	43655.3	2751185888	1872678	16.86

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Pseudoalteromonas citrea strain CIP 105339 16S ribosomal RNA gene, partial sequence	AF529062	1491	1872678
6098	Pseudoalteromonas citrea 16S ribosomal RNA gene, partial sequence	AF082563	1496	1872678
124043	Pseudoalteromonas fuliginea 16S ribosomal RNA gene, partial sequence.	KY471031	599	1872678

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Pseudoalteromonas fuliginea KMM 216
NCBI: GCA_000690055

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	99.30	no
125439	motility	BacteriaNetⓘ	yes	57.00	no
125439	gram_stain	BacteriaNetⓘ	negative	99.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudoalteromonas citrea strain KMM216
PATRIC: 43655.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	100.00	yes
125438	anaerobic	anaerobicⓘ	no	93.23	yes
125438	spore-forming	spore-formingⓘ	no	88.93	yes
125438	thermophilic	thermophileⓘ	no	98.18	yes
125438	aerobic	aerobicⓘ	yes	79.79	yes
125438	flagellated	motile2+ⓘ	yes	91.59	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Alteromonas fuliginea (Romanenko et al. 1995) as Pseudoalteromonas fuliginea comb. nov. and an emended description.	Machado H, Vynne NG, Christiansen G, Gram L	Int J Syst Evol Microbiol	10.1099/ijsem.0.001259	2016
Phylogeny	Alteromonas marina sp. nov., isolated from sea water of the East Sea in Korea.	Yoon JH, Kim IG, Kang KH, Oh TK, Park YH	Int J Syst Evol Microbiol	10.1099/ijs.0.02536-0	2003

References

#6098	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15748
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#42003	; Curators of the CIP;
#43169	Henrique Machado, Nikolaj G. Vynne, Gunna Christiansen and Lone Gram: Reclassification of Alteromonas fuliginea (Romanenko et al. 1995) as Pseudoalteromonas fuliginea comb. nov. and an emended description. IJSEM 66: 3737 - 3742 2016 ( DOI 10.1099/ijsem.0.001259 , PubMed 27380907 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68382	Automatically annotated from API zym .
#119481	Collection of Institut Pasteur ; Curators of the CIP; CIP 105339
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pseudoalteromonas fuliginea (DSM 15748, CIP 105339, KMM 216)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Enzymes

Fatty acid profile

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000690055

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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