Oligella ureolytica C379 is a microaerophile, Gram-negative, motile bacterium that was isolated from human urine.
Gram-negative motile rod-shaped microaerophile genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Burkholderiales |
| Family Alcaligenaceae |
| Genus Oligella |
| Species Oligella ureolytica |
| Full scientific name Oligella ureolytica Rossau et al. 1987 |
| BacDive ID | Other strains from Oligella ureolytica (7) | Type strain |
|---|---|---|
| 135160 | O. ureolytica CIP 103115, ATCC 43535, CCUG 17791, LMG 6773, ... | |
| 142410 | O. ureolytica CCUG 12412 | |
| 142440 | O. ureolytica CCUG 12503 | |
| 142497 | O. ureolytica CCUG 12688, LMG 3242 | |
| 143188 | O. ureolytica CCUG 17688, LMG 6610 | |
| 143189 | O. ureolytica CCUG 17689, LMG 6611 | |
| 143190 | O. ureolytica CCUG 17692, LMG 6614 |
| 23272 | Type of hemolysisgamma |
| @ref: | 66793 |
| multimedia content: | EM_DSM_18253_2.jpg |
| multimedia.multimedia content: | EM_DSM_18253_2.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_18253_3.jpg |
| multimedia.multimedia content: | EM_DSM_18253_3.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_18253_4.jpg |
| multimedia.multimedia content: | EM_DSM_18253_4.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref: | 66793 |
| multimedia content: | EM_DSM_18253_5.jpg |
| multimedia.multimedia content: | EM_DSM_18253_5.jpg |
| caption: | electron microscopic image |
| intellectual property rights: | © HZI/Manfred Rohde |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 7461 | COLUMBIA BLOOD AGAR (DSMZ Medium 429) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD AGAR (DSMZ Medium 429) Composition: Horse blood 40.0 g/l Columbia agar base | ||
| 40525 | MEDIUM 3 - Columbia agar | Columbia agar (39.000 g);distilled water (1000.000 ml) | |||
| 123746 | CIP Medium 3 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 99.7 |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 23272 | NaCl | positive | maximum | 4.5 % |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 23272 | 32382 ChEBI | (R)-mandelate | - | carbon source | |
| 23272 | 32800 ChEBI | (S)-mandelic acid | - | growth | |
| 23272 | 16567 ChEBI | 2-aminobenzoate | - | carbon source | |
| 23272 | 28340 ChEBI | 2-aminobutyrate | - | growth | |
| 23272 | 19475 ChEBI | 2-aminopentanoic acid | - | growth | |
| 23272 | 16808 ChEBI | 2-dehydro-D-gluconate | - | carbon source | |
| 23272 | 30916 ChEBI | 2-oxoglutarate | + | carbon source | |
| 23272 | 30761 ChEBI | 3-aminobenzoate | - | carbon source | |
| 23272 | 87997 ChEBI | 3-aminobutyrate | - | carbon source | |
| 23272 | 16193 ChEBI | 3-hydroxybenzoate | - | growth | |
| 23272 | 37054 ChEBI | 3-hydroxybutyrate | + | carbon source | |
| 23272 | 17836 ChEBI | 4-aminobenzoate | - | carbon source | |
| 23272 | 17879 ChEBI | 4-hydroxybenzoate | + | growth | |
| 23272 | 39150 ChEBI | 4-oxopentanoate | - | carbon source | |
| 23272 | 15887 ChEBI | 5-aminovaleric acid | - | growth | |
| 23272 | 17426 ChEBI | 5-dehydro-D-gluconate | - | carbon source | |
| 23272 | 27856 ChEBI | acetamide | - | carbon source | |
| 23272 | 27856 ChEBI | acetamide | - | hydrolysis | |
| 23272 | 30089 ChEBI | acetate | + | carbon source | |
| 23272 | 22210 ChEBI | aconitate | - | carbon source | |
| 23272 | 17128 ChEBI | adipate | - | carbon source | |
| 68369 | 17128 ChEBI | adipate | - | assimilation | from API 20NE |
| 23272 | 27613 ChEBI | amygdalin | - | carbon source | |
| 23272 | 18305 ChEBI | arbutin | - | carbon source | |
| 68369 | 29016 ChEBI | arginine | - | hydrolysis | from API 20NE |
| 23272 | 78208 ChEBI | azelaate | - | carbon source | |
| 23272 | 16150 ChEBI | benzoate | + | carbon source | |
| 23272 | 40538 ChEBI | benzylamine | - | carbon source | |
| 23272 | 16958 ChEBI | beta-alanine | - | carbon source | |
| 23272 | 17750 ChEBI | betaine | - | carbon source | |
| 23272 | 43799 ChEBI | butan-1-amine | - | carbon source | |
| 23272 | 17057 ChEBI | cellobiose | - | carbon source | |
| 23272 | 3565 ChEBI | cetrimide | - | growth | |
| 23272 | 30719 ChEBI | citraconate | - | carbon source | |
| 23272 | 16947 ChEBI | citrate | - | growth | |
| 23272 | 16919 ChEBI | creatine | - | carbon source | |
| 23272 | 15570 ChEBI | D-alanine | + | growth | |
| 23272 | 17108 ChEBI | D-arabinose | - | carbon source | |
| 23272 | 18403 ChEBI | D-arabitol | - | carbon source | |
| 23272 | 15824 ChEBI | D-fructose | - | builds acid from | |
| 23272 | 15824 ChEBI | D-fructose | - | carbon source | |
| 23272 | 28847 ChEBI | D-fucose | - | carbon source | |
| 23272 | 12936 ChEBI | D-galactose | - | carbon source | |
| 23272 | 8391 ChEBI | D-gluconate | - | carbon source | |
| 23272 | 17315 ChEBI | D-glucosamine | - | carbon source | |
| 23272 | 17634 ChEBI | D-glucose | - | builds acid from | |
| 23272 | 17634 ChEBI | D-glucose | - | carbon source | |
| 68369 | 17634 ChEBI | D-glucose | - | assimilation | from API 20NE |
| 68369 | 17634 ChEBI | D-glucose | - | fermentation | from API 20NE |
| 23272 | 62318 ChEBI | D-lyxose | - | carbon source | |
| 23272 | 15588 ChEBI | D-malate | - | growth | |
| 23272 | 16899 ChEBI | D-mannitol | - | carbon source | |
| 68369 | 16899 ChEBI | D-mannitol | - | assimilation | from API 20NE |
| 23272 | 16024 ChEBI | D-mannose | - | carbon source | |
| 68369 | 16024 ChEBI | D-mannose | - | assimilation | from API 20NE |
| 23272 | 16988 ChEBI | D-ribose | - | carbon source | |
| 23272 | 16443 ChEBI | D-tagatose | - | carbon source | |
| 23272 | 30927 ChEBI | D-tartrate | - | carbon source | |
| 23272 | 16296 ChEBI | D-tryptophan | - | carbon source | |
| 23272 | 65327 ChEBI | D-xylose | - | builds acid from | |
| 23272 | 65327 ChEBI | D-xylose | - | carbon source | |
| 23272 | 27689 ChEBI | decanoate | - | carbon source | |
| 68369 | 27689 ChEBI | decanoate | - | assimilation | from API 20NE |
| 23272 | 16991 ChEBI | dna | - | hydrolysis | |
| 23272 | 17113 ChEBI | erythritol | - | carbon source | |
| 23272 | 4853 ChEBI | esculin | - | carbon source | |
| 23272 | 4853 ChEBI | esculin | - | hydrolysis | |
| 68369 | 4853 ChEBI | esculin | - | hydrolysis | from API 20NE |
| 23272 | 16000 ChEBI | ethanolamine | - | carbon source | |
| 23272 | 15862 ChEBI | ethylamine | - | carbon source | |
| 23272 | 29806 ChEBI | fumarate | + | carbon source | |
| 23272 | 16813 ChEBI | galactitol | - | carbon source | |
| 23272 | 16865 ChEBI | gamma-aminobutyric acid | - | growth | |
| 23272 | 5291 ChEBI | gelatin | - | hydrolysis | |
| 68369 | 5291 ChEBI | gelatin | - | hydrolysis | from API 20NE |
| 23272 | 28066 ChEBI | gentiobiose | - | carbon source | |
| 68369 | 24265 ChEBI | gluconate | - | assimilation | from API 20NE |
| 23272 | 17859 ChEBI | glutaric acid | + | growth | |
| 23272 | 33871 ChEBI | glycerate | - | carbon source | |
| 23272 | 15428 ChEBI | glycine | - | carbon source | |
| 23272 | 28087 ChEBI | glycogen | - | carbon source | |
| 23272 | 29805 ChEBI | glycolate | - | carbon source | |
| 23272 | 32362 ChEBI | heptanoate | - | carbon source | |
| 23272 | 18295 ChEBI | histamine | - | carbon source | |
| 23272 | 15443 ChEBI | inulin | - | carbon source | |
| 23272 | 48944 ChEBI | isobutyrate | - | growth | |
| 23272 | 30803 ChEBI | isophthalate | - | carbon source | |
| 23272 | 48942 ChEBI | isovalerate | + | growth | |
| 23272 | 17240 ChEBI | itaconate | + | growth | |
| 23272 | 28683 ChEBI | kynurenine | - | carbon source | |
| 23272 | 16977 ChEBI | L-alanine | - | growth | |
| 23272 | 30849 ChEBI | L-arabinose | - | carbon source | |
| 68369 | 30849 ChEBI | L-arabinose | - | assimilation | from API 20NE |
| 23272 | 18403 ChEBI | L-arabitol | - | carbon source | |
| 23272 | 16467 ChEBI | L-arginine | - | carbon source | |
| 23272 | 29991 ChEBI | L-aspartate | - | growth | |
| 23272 | 16349 ChEBI | L-citrulline | - | carbon source | |
| 23272 | 17561 ChEBI | L-cysteine | - | carbon source | |
| 23272 | 18287 ChEBI | L-fucose | - | carbon source | |
| 23272 | 29985 ChEBI | L-glutamate | + | carbon source | |
| 23272 | 15971 ChEBI | L-histidine | - | carbon source | |
| 23272 | 17191 ChEBI | L-isoleucine | - | growth | |
| 23272 | 15603 ChEBI | L-leucine | - | growth | |
| 23272 | 18019 ChEBI | L-lysine | - | carbon source | |
| 23272 | 15589 ChEBI | L-malate | + | carbon source | |
| 23272 | 16643 ChEBI | L-methionine | - | carbon source | |
| 23272 | 18347 ChEBI | L-norleucine | - | growth | |
| 23272 | 15729 ChEBI | L-ornithine | - | carbon source | |
| 23272 | 17295 ChEBI | L-phenylalanine | - | carbon source | |
| 23272 | 17203 ChEBI | L-proline | + | growth | |
| 23272 | 62345 ChEBI | L-rhamnose | - | carbon source | |
| 23272 | 17115 ChEBI | L-serine | - | carbon source | |
| 23272 | 17266 ChEBI | L-sorbose | - | carbon source | |
| 23272 | 30924 ChEBI | L-tartrate | + | growth | |
| 23272 | 16857 ChEBI | L-threonine | - | carbon source | |
| 23272 | 16828 ChEBI | L-tryptophan | - | carbon source | |
| 23272 | 17895 ChEBI | L-tyrosine | - | carbon source | |
| 23272 | 16414 ChEBI | L-valine | - | growth | |
| 23272 | 65328 ChEBI | L-xylose | - | carbon source | |
| 23272 | 24996 ChEBI | lactate | + | carbon source | |
| 23272 | 17716 ChEBI | lactose | - | carbon source | |
| 68369 | 25115 ChEBI | malate | + | assimilation | from API 20NE |
| 23272 | 18300 ChEBI | maleic acid | - | carbon source | |
| 23272 | 15792 ChEBI | malonate | - | carbon source | |
| 23272 | 17306 ChEBI | maltose | - | builds acid from | |
| 23272 | 17306 ChEBI | maltose | - | carbon source | |
| 68369 | 17306 ChEBI | maltose | - | assimilation | from API 20NE |
| 23272 | 6731 ChEBI | melezitose | - | carbon source | |
| 23272 | 28053 ChEBI | melibiose | - | carbon source | |
| 23272 | 36986 ChEBI | mesaconate | + | growth | |
| 23272 | 30928 ChEBI | meso-tartrate | - | carbon source | |
| 23272 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | carbon source | |
| 23272 | 43943 ChEBI | methyl alpha-D-mannoside | - | carbon source | |
| 23272 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | carbon source | |
| 23272 | 506227 ChEBI | N-acetylglucosamine | - | carbon source | |
| 68369 | 59640 ChEBI | N-acetylglucosamine | - | assimilation | from API 20NE |
| 23272 | 17632 ChEBI | nitrate | + | reduction | |
| 68369 | 17632 ChEBI | nitrate | + | reduction | from API 20NE |
| 23272 | 32361 ChEBI | nonanoate | - | carbon source | |
| 23272 | 25646 ChEBI | octanoate | - | carbon source | |
| 23272 | 30623 ChEBI | oxalate | - | carbon source | |
| 23272 | 74848 ChEBI | pentan-1-amine | - | carbon source | |
| 23272 | 18401 ChEBI | phenylacetate | - | growth | |
| 23272 | 17563 ChEBI | phthalate | - | carbon source | |
| 23272 | 17774 ChEBI | pimelate | - | carbon source | |
| 23272 | 17272 ChEBI | propionate | + | growth | |
| 23272 | 17148 ChEBI | putrescine | - | carbon source | |
| 23272 | 15361 ChEBI | pyruvate | + | carbon source | |
| 23272 | 16634 ChEBI | raffinose | - | carbon source | |
| 23272 | 15963 ChEBI | ribitol | - | builds acid from | |
| 23272 | 15963 ChEBI | ribitol | - | carbon source | |
| 23272 | 17814 ChEBI | salicin | - | carbon source | |
| 23272 | 15611 ChEBI | sarcosine | - | carbon source | |
| 23272 | 41865 ChEBI | sebacic acid | - | carbon source | |
| 23272 | 30911 ChEBI | sorbitol | - | carbon source | |
| 23272 | 15746 ChEBI | spermine | - | carbon source | |
| 23272 | 28017 ChEBI | starch | - | carbon source | |
| 23272 | 28017 ChEBI | starch | - | hydrolysis | |
| 23272 | 9300 ChEBI | suberic acid | - | carbon source | |
| 23272 | 30031 ChEBI | succinate | + | carbon source | |
| 23272 | 17992 ChEBI | sucrose | - | carbon source | |
| 23272 | 30043 ChEBI | terephthalate | - | carbon source | |
| 23272 | 27082 ChEBI | trehalose | - | carbon source | |
| 23272 | 18123 ChEBI | trigonelline | - | growth | |
| 23272 | 16765 ChEBI | tryptamine | - | carbon source | |
| 68369 | 27897 ChEBI | tryptophan | - | energy source | from API 20NE |
| 23272 | 32528 ChEBI | turanose | - | carbon source | |
| 23272 | 53426 ChEBI | tween 80 | - | hydrolysis | |
| 23272 | 16199 ChEBI | urea | - | carbon source | |
| 68369 | 16199 ChEBI | urea | + | hydrolysis | from API 20NE |
| 23272 | 31011 ChEBI | valerate | + | growth | |
| 23272 | 17151 ChEBI | xylitol | - | carbon source |
| @ref | ChEBI | Metabolite | Is resistant | |
|---|---|---|---|---|
| 23272 | 17334 | penicillin |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 23272 | Acid phosphatase | - | 3.1.3.2 | |
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 23272 | Alkaline phosphatase | - | 3.1.3.1 | |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 23272 | alpha-chymotrypsin | - | 3.4.21.1 | |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 23272 | alpha-fucosidase | - | 3.2.1.51 | |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 23272 | alpha-galactosidase | - | 3.2.1.22 | |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 23272 | alpha-glucosidase | - | 3.2.1.20 | |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 23272 | alpha-mannosidase | - | 3.2.1.24 | |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68369 | arginine dihydrolase | - | 3.5.3.6 | from API 20NE |
| 23272 | beta-galactosidase | - | 3.2.1.23 | |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 23272 | beta-glucoronidase | - | 3.2.1.31 | |
| 23272 | beta-glucosidase | - | 3.2.1.21 | |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68369 | beta-glucosidase | - | 3.2.1.21 | from API 20NE |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 23272 | cystine arylamidase | - | 3.4.11.3 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68369 | cytochrome oxidase | + | 1.9.3.1 | from API 20NE |
| 23272 | esterase (C 4) | + | ||
| 68382 | esterase (C 4) | - | from API zym | |
| 23272 | esterase lipase (C 8) | + | ||
| 68382 | esterase lipase (C 8) | - | from API zym | |
| 68369 | gelatinase | - | from API 20NE | |
| 23272 | leucine arylamidase | + | 3.4.11.1 | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 23272 | lipase (C 14) | - | ||
| 68382 | lipase (C 14) | - | from API zym | |
| 23272 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 23272 | naphthol-AS-BI-phosphohydrolase | - | ||
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 23272 | trypsin | - | 3.4.21.4 | |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 23272 | urease | + | 3.5.1.5 | |
| 68369 | urease | + | 3.5.1.5 | from API 20NE |
| 23272 | valine arylamidase | - | ||
| 68382 | valine arylamidase | - | from API zym |
| Metadata FA analysis | ||||||||||||||||||||||||||||||||||||||||||||||
| type of FA analysis | whole cell analysis | |||||||||||||||||||||||||||||||||||||||||||||
| method/protocol | CCUG | |||||||||||||||||||||||||||||||||||||||||||||
| @ref | 44381 | |||||||||||||||||||||||||||||||||||||||||||||
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Global distribution of 16S sequence AJ251912 (>99% sequence identity) for Oligella ureolytica subclade from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 124043 | ASM1602873v1 assembly for Oligella ureolytica FDAARGOS_872 | complete | 90244 | 91.98 | ||||
| 66792 | 53618_B01 assembly for Oligella ureolytica NCTC11997 | contig | 90244 | 73.47 | ||||
| 66792 | ASM37374v1 assembly for Oligella ureolytica DSM 18253 | scaffold | 1122619 | 57.23 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 23272 | 46-47 | thermal denaturation, midpoint method (Tm) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 88.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 98.00 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 73.40 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.70 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 96.74 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 92.49 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 70.86 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 88.09 | no |
| 125438 | thermophilic | thermophileⓘ | no | 93.72 | yes |
| 125438 | flagellated | motile2+ⓘ | yes | 74.82 | yes |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| The Effect of Oral Probiotic Bacillus amyloliquefaciens on Intestinal Microbiota, Intestinal Structure, Serum Antioxidant Capacity and Inflammatory Responses of Heat Stressed Rats. | Zhang X, Tang L, Freeman BM, Wang B, Shen W, Li W. | J Microbiol Biotechnol | 10.4014/jmb.2505.05008 | 2025 | ||
| Tracking Reservoirs of Antimicrobial Resistance Genes in a Complex Microbial Community Using Metagenomic Hi-C: The Case of Bovine Digital Dermatitis. | Beyi AF, Hassall A, Phillips GJ, Plummer PJ. | Antibiotics (Basel) | 10.3390/antibiotics10020221 | 2021 | ||
| Interference activity of a minimal Type I CRISPR-Cas system from Shewanella putrefaciens. | Dwarakanath S, Brenzinger S, Gleditzsch D, Plagens A, Klingl A, Thormann K, Randau L. | Nucleic Acids Res | 10.1093/nar/gkv882 | 2015 | ||
| A Novel Assay for Detection of Methicillin-Resistant Staphylococcus aureus Directly From Clinical Samples. | McClure JA, Conly JM, Obasuyi O, Ward L, Ugarte-Torres A, Louie T, Zhang K. | Front Microbiol | 10.3389/fmicb.2020.01295 | 2020 | ||
| Phylogeny | 16S rRNA gene sequencing on a benchtop sequencer: accuracy for identification of clinically important bacteria. | Watts GS, Youens-Clark K, Slepian MJ, Wolk DM, Oshiro MM, Metzger GS, Dhingra D, Cranmer LD, Hurwitz BL. | J Appl Microbiol | 10.1111/jam.13590 | 2017 | |
| Oligella spp.: A systematic review on an uncommon urinary pathogen. | Farfour E, Vasse M, Vallee A. | Eur J Clin Microbiol Infect Dis | 10.1007/s10096-024-04797-9 | 2024 | ||
| Pathogenicity | Plants traditionally used individually and in combination to treat sexually transmitted infections in northern Maputaland, South Africa: antimicrobial activity and cytotoxicity. | Naidoo D, van Vuuren SF, van Zyl RL, de Wet H | J Ethnopharmacol | 10.1016/j.jep.2013.07.018 | 2013 |
| #7461 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18253 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #23272 | R. Rossau, K. Kersters, E. Falsen, E. Jantzen, P. Segers, A. Union, L. Nehls, J. De Ley: Oligella, a New Genus Including Oligella urethralis comb. nov. (Formerly Moraxella urethralis) and Oligella ureolytica sp. nov. (Formerly CDC Group IVe): Relationship to Taylorella equigenitalis and Related Taxa. IJSEM 37: 198 - 210 1987 ( DOI 10.1099/00207713-37-3-198 ) |
| #40525 | ; Curators of the CIP; |
| #44381 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 1465 A |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66793 | Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 ) |
| #68369 | Automatically annotated from API 20NE . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #123746 | Collection of Institut Pasteur ; Curators of the CIP; CIP 103114 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive356.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data