Azohydromonas australica H-N is a facultative anaerobe, Gram-negative, motile bacterium that was isolated from soil.
Gram-negative motile rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
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|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Burkholderiales |
| Family Sphaerotilaceae |
| Genus Azohydromonas |
| Species Azohydromonas australica |
| Full scientific name Azohydromonas australica Xie and Yokota 2005 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 568 | MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81) | Medium recipe at MediaDive | Name: MINERAL MEDIUM FOR CHEMOLITHOTROPHIC GROWTH (H-3) (DSMZ Medium 81) Composition: Agar 20.1005 g/l Na2HPO4 x 2 H2O 2.91457 g/l KH2PO4 2.31156 g/l NH4Cl 1.00503 g/l MgSO4 x 7 H2O 0.502512 g/l Ferric ammonium citrate 0.0502513 g/l CaCl2 x 2 H2O 0.0100503 g/l NaVO3 x H2O 0.00502512 g/l Calcium pantothenate 0.00251256 g/l Pyridoxine hydrochloride 0.00251256 g/l Nicotinic acid 0.00251256 g/l Thiamine-HCl x 2 H2O 0.00251256 g/l H3BO3 0.00150754 g/l CoCl2 x 6 H2O 0.00100503 g/l Riboflavin 0.000502513 g/l ZnSO4 x 7 H2O 0.000502513 g/l MnCl2 x 4 H2O 0.000150754 g/l Na2MoO4 x 2 H2O 0.000150754 g/l NiCl2 x 6 H2O 0.000100503 g/l CuCl2 x 2 H2O 5.02513e-05 g/l Vitamin B12 5.02513e-05 g/l Folic acid 1.00503e-05 g/l Biotin 5.02513e-06 g/l Distilled water | ||
| 568 | NUTRIENT AGAR (DSMZ Medium 1) | Medium recipe at MediaDive | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water | ||
| 38379 | MEDIUM 328- for nutrient agar | Distilled water make up to (1000.000 ml);Agar (15.000 g);Peptone (5.000g);Beef extract (3.000 g) | |||
| 116643 | CIP Medium 328 | Medium recipe at CIP | |||
| 568 | R2A MEDIUM (DSMZ Medium 830) | Medium recipe at MediaDive | Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water |
| 116643 | Oxygen tolerancefacultative anaerobe |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 94.7 |
| 568 | CompoundPHB |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68371 | 27613 ChEBI | amygdalin | - | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | - | builds acid from | from API 50CH acid |
| 68371 | 17057 ChEBI | cellobiose | - | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 12936 ChEBI | D-galactose | - | builds acid from | from API 50CH acid |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68371 | 16899 ChEBI | D-mannitol | - | builds acid from | from API 50CH acid |
| 68371 | 16024 ChEBI | D-mannose | - | builds acid from | from API 50CH acid |
| 68371 | 16988 ChEBI | D-ribose | - | builds acid from | from API 50CH acid |
| 68371 | 17924 ChEBI | D-sorbitol | - | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | - | builds acid from | from API 50CH acid |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68371 | 28066 ChEBI | gentiobiose | - | builds acid from | from API 50CH acid |
| 68371 | 24265 ChEBI | gluconate | - | builds acid from | from API 50CH acid |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API 50CH acid |
| 68371 | 17266 ChEBI | L-sorbose | - | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17716 ChEBI | lactose | - | builds acid from | from API 50CH acid |
| 68371 | 17306 ChEBI | maltose | - | builds acid from | from API 50CH acid |
| 68371 | 6731 ChEBI | melezitose | + | builds acid from | from API 50CH acid |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | - | builds acid from | from API 50CH acid |
| 116643 | 17632 ChEBI | nitrate | + | reduction | |
| 116643 | 16301 ChEBI | nitrite | + | reduction | |
| 68371 | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid | |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | - | builds acid from | from API 50CH acid |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68371 | 17992 ChEBI | sucrose | + | builds acid from | from API 50CH acid |
| 68371 | 27082 ChEBI | trehalose | - | builds acid from | from API 50CH acid |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | - | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 116643 | catalase | + | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 116643 | oxidase | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 116643 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 116643 | not determinedn.d. | - | - | - | - | - | - | - | - | - | - | + | + | - | - | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | - | - | + | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM43072v1 assembly for Azohydromonas australica DSM 1124 | scaffold | 1121030 | 32.32 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 94.70 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 86.40 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 94.90 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 83.40 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.99 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 94.49 | yes |
| 125438 | spore-forming | spore-formingⓘ | no | 87.96 | no |
| 125438 | aerobic | aerobicⓘ | yes | 72.95 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 95.00 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 81.57 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
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| Characterizing the growth of PHA-producing microorganisms on short-chain carboxylic acids. | Leonhardt S, Tamang P, Tovar GEM, Zibek S. | Microb Cell Fact | 10.1186/s12934-025-02840-8 | 2025 | ||
| The pharmaceutical quality of freeze-dried tablets containing therapeutic bacteriophages against Pseudomonas aeruginosa and Staphylococcus aureus. | Komarkova M, Benesik M, Cerna E, Sedlackova L, Mosa M, Vojtova L, Franc A, Pantucek R. | Int J Pharm | 10.1016/j.ijpharm.2025.125199 | 2025 | ||
| Cultivation of yeasts on liquid digestate to remove organic pollutants and nutrients and for potential application as co-culture with microalgae. | Sobolewska E, Borowski S, Kregiel D. | J Environ Manage | 10.1016/j.jenvman.2024.121351 | 2024 | ||
| De Novo Assembly of the Polyhydroxybutyrate (PHB) Producer Azohydromonas lata Strain H1 Genome and Genomic Analysis of PHB Production Machinery. | Traversa D, Pazzani C, D'Addabbo P, Trisolini L, Chiara M, Oliva M, Marzella A, Mandorino C, Calia C, Chimienti G, Manzari C, Pesole G, Scrascia M. | Microorganisms | 10.3390/microorganisms13010137 | 2025 | ||
| Metabolism | Single-cell oil production by Mortierella isabellina DSM 1414 using different sugars as carbon source. | Demir M, Gundes AG. | Biotechnol Prog | 10.1002/btpr.3050 | 2020 | |
| Substrate Optimization for PHB Production from Ricotta Cheese Exhausted Whey Using Azohydromonas lata DSM 1123 | Longo A, Sconosciuto L, Verni M, Carofiglio V, Centrone D, Villano M, Salvatori G, Pontonio E, Montemurro M, Rizzello C. | Microorganisms | 2025 | |||
| Familial Reclassification Within Order Lysobacterales and Proposal of Four Novel Species. | Ma T, Liu H, Chen Y, Liu J, Piao C, Xue H, Xu R, Li Y. | Microorganisms | 10.3390/microorganisms13061212 | 2025 | ||
| Metabolism | Quantitative proteomics using SWATH-MS identifies mechanisms of chloride tolerance in the halophilic acidophile Acidihalobacter prosperus DSM 14174. | Khaleque HN, Shafique R, Kaksonen AH, Boxall NJ, Boxall NJ, Watkin ELJ. | Res Microbiol | 10.1016/j.resmic.2018.07.002 | 2018 | |
| Metabolism | A novel archaeal species belonging to Methanoculleus genus identified via de-novo assembly and metagenomic binning process in biogas reactors. | Kougias PG, Campanaro S, Treu L, Zhu X, Angelidaki I. | Anaerobe | 10.1016/j.anaerobe.2017.02.009 | 2017 | |
| Enzymology | The Effect of Enzymatic Treatment with Mutanase, Beta-Glucanase, and DNase on a Saliva-Derived Biofilm Model. | Dukanovic Rikvold P, Skov Hansen LB, Meyer RL, Jorgensen MR, Tiwari MK, Schlafer S. | Caries Res | 10.1159/000535980 | 2024 | |
| Genetics | Identification of a putative novel polycyclic aromatic hydrocarbon-biodegrading gene cluster in a marine Roseobacteraceae bacterium Sagittula sp. MA-2. | Abe M, Sakai M, Kanaly RA, Mori JF. | Microbiol Spectr | 10.1128/spectrum.01074-24 | 2025 | |
| Genetics | Comprehensive Genomic Analysis of Marine Strain Streptomyces sp. 891, an Excellent Producer of Chrysomycin A with Therapeutic Potential. | Hu X, Tang Y, Liu Y, Pei X, Huang Z, Song F, Zhang H. | Mar Drugs | 10.3390/md20050287 | 2022 | |
| PUF-Immobilized Bjerkandera adusta DSM 3375 as a Tool for Bioremediation of Creosote Oil Contaminated Soil. | Struszczyk-Swita K, Drozdzynski P, Murawska K, Marchut-Mikolajczyk O. | Int J Mol Sci | 10.3390/ijms232012441 | 2022 | ||
| Genetics | Computational host range prediction-The good, the bad, and the ugly. | Howell AA, Versoza CJ, Pfeifer SP. | Virus Evol | 10.1093/ve/vead083 | 2024 | |
| Biotechnology | Biocatalytic Conversion of Carrageenans for the Production of 3,6-Anhydro-D-galactose. | Fuchs A, Romeis D, Hupfeld E, Sieber V. | J Agric Food Chem | 10.1021/acs.jafc.3c08613 | 2024 | |
| Plant Biostimulants Enhance Tomato Resilience to Salinity Stress: Insights from Two Greek Landraces. | Ntanasi T, Karavidas I, Spyrou GP, Giannothanasis E, Aliferis KA, Saitanis C, Fotopoulos V, Sabatino L, Savvas D, Ntatsi G. | Plants (Basel) | 10.3390/plants13101404 | 2024 | ||
| Study of Ecological Relationship of Yeast Species with Candida albicans in the Context of Vulvovaginal Infections. | Caetano CF, Gaspar C, Oliveira AS, Palmeira-de-Oliveira R, Rodrigues L, Goncalves T, Martinez-de-Oliveira J, Palmeira-de-Oliveira A, Rolo J. | Microorganisms | 10.3390/microorganisms11102398 | 2023 | ||
| Draft Genome Sequence of the Acidophilic, Halotolerant, and Iron/Sulfur-Oxidizing Acidihalobacter prosperus DSM 14174 (Strain V6). | Khaleque HN, Ramsay JP, Murphy RJ, Kaksonen AH, Boxall NJ, Watkin EL. | Genome Announc | 10.1128/genomea.01469-16 | 2017 | ||
| Polyhydroxyalkanoate Production by Caenibius tardaugens from Steroidal Endocrine Disruptors. | Ibero J, Rivero-Buceta V, Garcia JL, Galan B. | Microorganisms | 10.3390/microorganisms10040706 | 2022 | ||
| Pathogenicity | Mycotoxin Contamination Status of Cereals in China and Potential Microbial Decontamination Methods. | Zhang J, Tang X, Cai Y, Zhou WW. | Metabolites | 10.3390/metabo13040551 | 2023 | |
| Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of environmental organisms: the Planctomycetes paradigm. | Cayrou C, Raoult D, Drancourt M. | Environ Microbiol Rep | 10.1111/j.1758-2229.2010.00176.x | 2010 | ||
| Characterization of Two Cryptic Plasmids Isolated in Haiti from Clinical Vibrio cholerae Non-O1/Non-O139. | Ceccarelli D, Garriss G, Choi SY, Hasan NA, Stepanauskas R, Pop M, Huq A, Colwell RR. | Front Microbiol | 10.3389/fmicb.2017.02283 | 2017 | ||
| Breakdown of 3-(allylsulfonio)propanoates in bacteria from the Roseobacter group yields garlic oil constituents. | Chhalodia AK, Dickschat JS. | Beilstein J Org Chem | 10.3762/bjoc.17.51 | 2021 | ||
| Biological Control of Fusarium culmorum, Fusarium graminearum and Fusarium poae by Antagonistic Yeasts. | Podgorska-Kryszczuk I, Solarska E, Kordowska-Wiater M. | Pathogens | 10.3390/pathogens11010086 | 2022 | ||
| Mechanisms of recalcitrant fucoidan breakdown in marine Planctomycetota. | Perez-Cruz C, Moraleda-Montoya A, Liebana R, Terrones O, Arrizabalaga U, Garcia-Alija M, Lorizate M, Martinez Gascuena A, Garcia-Alvarez I, Nieto-Garai JA, Olazar-Intxausti J, Rodriguez-Colinas B, Mann E, Chiara JL, Contreras FX, Guerin ME, Trastoy B, Alonso-Saez L. | Nat Commun | 10.1038/s41467-024-55268-w | 2024 | ||
| Biocatalytic approaches for the quantitative production of single stereoisomers from racemates. | Gadler P, Glueck SM, Kroutil W, Nestl BM, Larissegger-Schnell B, Ueberbacher BT, Wallner SR, Faber K. | Biochem Soc Trans | 10.1042/bst20060296 | 2006 | ||
| Metabolism | Identification of the EdcR Estrogen-Dependent Repressor in Caenibius tardaugens NBRC 16725: Construction of a Cellular Estradiol Biosensor. | Ibero J, Galan B, Garcia JL. | Genes (Basel) | 10.3390/genes12121846 | 2021 | |
| Aurantiogliocladin inhibits biofilm formation at subtoxic concentrations. | Yuyama KT, Neves TSPDC, Memoria MT, Tartuci IT, Abraham WR. | AIMS Microbiol | 10.3934/microbiol.2017.1.50 | 2017 | ||
| Conversion of industrial food wastes by Alcaligenes latus into polyhydroxyalkanoates. | Yu PH, Chua H, Huang AL, Ho KP. | Appl Biochem Biotechnol | 10.1385/abab:78:1-3:445 | 1999 | ||
| Genetics | High Diversity and Functional Potential of Undescribed "Acidobacteriota" in Danish Wastewater Treatment Plants. | Kristensen JM, Singleton C, Clegg LA, Petriglieri F, Nielsen PH. | Front Microbiol | 10.3389/fmicb.2021.643950 | 2021 | |
| Phylogeny | Genomic Comparison, Phylogeny and Taxonomic Reevaluation of the Ectothiorhodospiraceae and Description of Halorhodospiraceae fam. nov. and Halochlorospira gen. nov. | Imhoff JF, Kyndt JA, Meyer TE. | Microorganisms | 10.3390/microorganisms10020295 | 2022 | |
| The Chemical, Microbiological and Volatile Composition of Kefir-like Beverages Produced from Red Table Grape Juice in Repeated 24-h Fed-Batch Subcultures. | Bazan DL, Del Rio PG, Dominguez JM, Cortes-Dieguez S, Mejuto JC, Perez-Guerra N. | Foods | 10.3390/foods11193117 | 2022 | ||
| Evolution of DNA packaging in gene transfer agents. | Esterman ES, Wolf YI, Kogay R, Koonin EV, Zhaxybayeva O. | Virus Evol | 10.1093/ve/veab015 | 2021 | ||
| Screening for Microbial Metal-Chelating Siderophores for the Removal of Metal Ions from Solutions. | Hofmann M, Heine T, Malik L, Hofmann S, Joffroy K, Senges CHR, Bandow JE, Tischler D. | Microorganisms | 10.3390/microorganisms9010111 | 2021 | ||
| Metabolism | Isolation, characterization, anti-MRSA evaluation, and in-silico multi-target anti-microbial validations of actinomycin X2 and actinomycin D produced by novel Streptomyces smyrnaeus UKAQ_23. | Qureshi KA, Bholay AD, Rai PK, Mohammed HA, Khan RA, Azam F, Jaremko M, Emwas AH, Stefanowicz P, Waliczek M, Kijewska M, Ragab EA, Rehan M, Elhassan GO, Anwar MJ, Prajapati DK. | Sci Rep | 10.1038/s41598-021-93285-7 | 2021 | |
| Metabolism | Completion of the gut microbial epi-bile acid pathway. | Doden HL, Wolf PG, Gaskins HR, Anantharaman K, Alves JMP, Ridlon JM. | Gut Microbes | 10.1080/19490976.2021.1907271 | 2021 | |
| Metabolism | Archaeal production of polyhydroxyalkanoate (PHA) co- and terpolyesters from biodiesel industry-derived by-products. | Hermann-Krauss C, Koller M, Muhr A, Fasl H, Stelzer F, Braunegg G. | Archaea | 10.1155/2013/129268 | 2013 | |
| Phylogeny | A diverse group of halophilic bacteria exist in Lunsu, a natural salt water body of Himachal Pradesh, India. | Gupta S, Sharma P, Dev K, Srivastava M, Sourirajan A. | Springerplus | 10.1186/s40064-015-1028-1 | 2015 | |
| Metabolism | Evolutionary gradient of predicted nuclear localization signals (NLS)-bearing proteins in genomes of family Planctomycetaceae. | Guo M, Yang R, Huang C, Liao Q, Fan G, Sun C, Lee SM. | BMC Microbiol | 10.1186/s12866-017-0981-y | 2017 | |
| Metabolism | In silico prospection of microorganisms to produce polyhydroxyalkanoate from whey: Caulobacter segnis DSM 29236 as a suitable industrial strain. | Bustamante D, Segarra S, Tortajada M, Ramon D, Del Cerro C, Auxiliadora Prieto M, Iglesias JR, Rojas A. | Microb Biotechnol | 10.1111/1751-7915.13371 | 2019 | |
| Metabolism | Channeling C1 Metabolism toward S-Adenosylmethionine-Dependent Conversion of Estrogens to Androgens in Estrogen-Degrading Bacteria. | Jacoby C, Krull J, Andexer J, Jehmlich N, von Bergen M, Bruls T, Boll M. | mBio | 10.1128/mbio.01259-20 | 2020 | |
| Metabolism | Bioaugmentation of syntrophic acetate-oxidizing culture in biogas reactors exposed to increasing levels of ammonia. | Westerholm M, Leven L, Schnurer A. | Appl Environ Microbiol | 10.1128/aem.01637-12 | 2012 | |
| Developing Techniques for the Utilization of Planctomycetes As Producers of Bioactive Molecules. | Jeske O, Surup F, Ketteniss M, Rast P, Forster B, Jogler M, Wink J, Jogler C. | Front Microbiol | 10.3389/fmicb.2016.01242 | 2016 | ||
| Bioreactor Operating Strategies for Improved Polyhydroxyalkanoate (PHA) Productivity. | Blunt W, Levin DB, Cicek N. | Polymers (Basel) | 10.3390/polym10111197 | 2018 | ||
| In-depth biochemical identification of a novel methyl parathion hydrolase from Azohydromonas australica and its high effectiveness in the degradation of various organophosphorus pesticides. | Zhao S, Xu W, Zhang W, Wu H, Guang C, Mu W. | Bioresour Technol | 10.1016/j.biortech.2020.124641 | 2021 | ||
| Metagenomic analysis reveals functional genes in soil microbial electrochemical removal of tetracycline. | Zhao X, Li X, Li Y, Zhang X, Zhai F, Ren T, Li Y. | J Hazard Mater | 10.1016/j.jhazmat.2020.124880 | 2021 | ||
| Metabolism | Use of NAD(P)H fluorescence measurement for on-line monitoring of metabolic state of Azohydromonas australica in poly(3-hydroxybutyrate) production. | Gahlawat G, Srivastava AK. | Appl Biochem Biotechnol | 10.1007/s12010-012-0040-y | 2013 | |
| Estimation of fundamental kinetic parameters of polyhydroxybutyrate fermentation process of Azohydromonas australica using statistical approach of media optimization. | Gahlawat G, Srivastava AK. | Appl Biochem Biotechnol | 10.1007/s12010-012-9840-3 | 2012 | ||
| Metabolism | Enhanced production of poly(3-hydroxybutyrate) in a novel airlift reactor with in situ cell retention using Azohydromonas australica. | Gahlawat G, Sengupta B, Srivastava AK. | J Ind Microbiol Biotechnol | 10.1007/s10295-012-1138-5 | 2012 | |
| Phylogeny | A culture-independent approach, supervised machine learning, and the characterization of the microbial community composition of coastal areas across the Bay of Bengal and the Arabian Sea. | Rekadwad BN, Shouche YS, Jangid K. | BMC Microbiol | 10.1186/s12866-024-03295-4 | 2024 | |
| A Novel Organophosphorus Acid Anhydrolase from Deep Sea Sediment with High Degradation Efficiency for Organophosphorus Pesticides and Nerve Agent. | Zheng X, Wang L, Qi L, Dong Z. | Microorganisms | 10.3390/microorganisms10061112 | 2022 | ||
| Degradation insight of organophosphate pesticide chlorpyrifos through novel intermediate 2,6-dihydroxypyridine by Arthrobacter sp. HM01. | Mali H, Shah C, Patel DH, Trivedi U, Subramanian RB. | Bioresour Bioprocess | 10.1186/s40643-022-00515-5 | 2022 | ||
| Investigation of the Physiology of the Obligate Alkaliphilic Bacillus marmarensis GMBE 72T Considering Its Alkaline Adaptation Mechanism for Poly(3-hydroxybutyrate) Synthesis. | Atakav Y, Pinar O, Kazan D. | Microorganisms | 10.3390/microorganisms9020462 | 2021 | ||
| Economic and environmental assessment of bacterial poly(3-hydroxybutyrate) production from the organic fraction of municipal solid waste. | Izaguirre JK, Baranano L, Castanon S, Santos JAL, Cesario MT, da Fonseca MMR, Alkorta I, Garbisu C. | Bioresour Bioprocess | 10.1186/s40643-021-00392-4 | 2021 | ||
| Polyhydroxybutyrate (PHB) Production Using an Arabinose-Inducible Expression System in Comparison With Cold Shock Inducible Expression System in Escherichia coli. | Napathorn SC, Visetkoop S, Pinyakong O, Okano K, Honda K. | Front Bioeng Biotechnol | 10.3389/fbioe.2021.661096 | 2021 | ||
| Production of poly(3-hydroxybutyrate) by Halomonas boliviensis in an air-lift reactor. | Rivera-Terceros P, Tito-Claros E, Torrico S, Carballo S, Van-Thuoc D, Quillaguaman J. | J Biol Res (Thessalon) | 10.1186/s40709-015-0031-6 | 2015 | ||
| Optimization of cultivation medium and cyclic fed-batch fermentation strategy for enhanced polyhydroxyalkanoate production by Bacillus thuringiensis using a glucose-rich hydrolyzate. | Singh S, Sithole B, Lekha P, Permaul K, Govinden R. | Bioresour Bioprocess | 10.1186/s40643-021-00361-x | 2021 | ||
| Pathogenicity | Nontarget effects of foliar fungicide application on the rhizosphere: diversity of nifH gene and nodulation in chickpea field. | Yang C, Hamel C, Vujanovic V, Gan Y. | J Appl Microbiol | 10.1111/j.1365-2672.2012.05262.x | 2012 | |
| Enzymology | Substrate Specificity Analysis of Dihydrofolate/Dihydromethanopterin Reductase Homologs in Methylotrophic alpha-Proteobacteria. | Burton M, Abanobi C, Wang KT, Ma Y, Rasche ME. | Front Microbiol | 10.3389/fmicb.2018.02439 | 2018 | |
| Regulating the production of (R)-3-hydroxybutyrate in Escherichia coli by N or P limitation. | Guevara-Martinez M, Sjoberg Gallno K, Sjoberg G, Jarmander J, Perez-Zabaleta M, Quillaguaman J, Larsson G. | Front Microbiol | 10.3389/fmicb.2015.00844 | 2015 | ||
| Metabolism | Endophytic Fungus Drives Nodulation and N2 Fixation Attributable to Specific Root Exudates. | Xie XG, Zhang FM, Yang T, Chen Y, Li XG, Dai CC. | mBio | 10.1128/mbio.00728-19 | 2019 | |
| Metabolism | Microbial community composition of polyhydroxyalkanoate-accumulating organisms in full-scale wastewater treatment plants operated in fully aerobic mode. | Oshiki M, Onuki M, Satoh H, Mino T. | Microbes Environ | 10.1264/jsme2.me12141 | 2013 | |
| Phylogeny | Comparative molecular analysis of chemolithoautotrophic bacterial diversity and community structure from coastal saline soils, Gujarat, India. | Yousuf B, Sanadhya P, Keshri J, Jha B. | BMC Microbiol | 10.1186/1471-2180-12-150 | 2012 | |
| Metabolism | Development of a mathematical model for the growth associated Polyhydroxybutyrate fermentation by Azohydromonas australica and its use for the design of fed-batch cultivation strategies. | Gahlawat G, Srivastava AK | Bioresour Technol | 10.1016/j.biortech.2013.03.023 | 2013 | |
| Reinekea thalattae sp. nov., a New Species of the Genus Reinekea Isolated from Surface Seawater in Sehwa Beach. | Kim I, Chhetri G, Kim J, Kang M, Seo T. | Curr Microbiol | 10.1007/s00284-020-02224-8 | 2020 | ||
| Phylogeny | Aestuariicoccus marinus gen. nov., sp. nov., isolated from sea-tidal flat sediment. | Feng T, Jeong SE, Kim KH, Park HY, Jeon CO. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002494 | 2018 | |
| Phylogeny | Halomonas zhaodongensis sp. nov., a slightly halophilic bacterium isolated from saline-alkaline soils in Zhaodong, China. | Jiang J, Pan Y, Meng L, Hu S, Zhang X, Hu B, Meng J, Li C, Huang H, Wang K, Su T. | Antonie Van Leeuwenhoek | 10.1007/s10482-013-9976-3 | 2013 | |
| Phylogeny | Bhargavaea ullalensis sp. nov., isolated from coastal sand. | Glaeser SP, Arun AB, Rekha PD, Prabhu S, Busse HJ, Kampfer P. | Int J Syst Evol Microbiol | 10.1099/ijs.0.045062-0 | 2013 | |
| Phylogeny | Gordonia alkaliphila sp. nov., an actinomycete isolated from tidal flat sediment. | Cha JH, Cha CJ. | Int J Syst Evol Microbiol | 10.1099/ijs.0.039289-0 | 2013 | |
| Phylogeny | Gordonia phosphorivorans sp. nov., isolated from a wastewater bioreactor with phosphorus removal. | Kampfer P, Martin K, Dott W. | Int J Syst Evol Microbiol | 10.1099/ijs.0.037093-0 | 2013 | |
| Phylogeny | Gordonia caeni sp. nov., isolated from sludge of a sewage disposal plant. | Srinivasan S, Park G, Yang H, Hwang S, Bae Y, Jung YA, Kim MK, Lee M. | Int J Syst Evol Microbiol | 10.1099/ijs.0.029736-0 | 2012 | |
| Phylogenomic reappraisal of the family Rhizobiaceae at the genus and species levels, including the description of Ectorhizobium quercum gen. nov., sp. nov. | Ma T, Xue H, Piao C, Jiang N, Li Y. | Front Microbiol | 10.3389/fmicb.2023.1207256 | 2023 | ||
| Phylogeny | Reinekea aestuarii sp. nov., isolated from tidal flat sediment. | Choi A, Cho JC. | Int J Syst Evol Microbiol | 10.1099/ijs.0.018739-0 | 2010 | |
| Phylogeny | Halomonas andesensis sp. nov., a moderate halophile isolated from the saline lake Laguna Colorada in Bolivia. | Guzman D, Quillaguaman J, Munoz M, Hatti-Kaul R. | Int J Syst Evol Microbiol | 10.1099/ijs.0.014522-0 | 2010 | |
| Phylogeny | Phenylobacterium composti sp. nov., isolated from cotton waste compost in Korea. | Weon HY, Kim BY, Kwon SW, Go SJ, Koo BS, Stackebrandt E. | Int J Syst Evol Microbiol | 10.1099/ijs.0.65530-0 | 2008 | |
| Phylogeny | Gordonia shandongensis sp. nov., isolated from soil in China. | Luo H, Gu Q, Xie J, Hu C, Liu Z, Huang Y. | Int J Syst Evol Microbiol | 10.1099/ijs.0.64536-0 | 2007 | |
| Metabolism | Halomonas shengliensis sp. nov., a moderately halophilic, denitrifying, crude-oil-utilizing bacterium. | Wang YN, Cai H, Chi CQ, Lu AH, Lin XG, Jiang ZF, Wu XL. | Int J Syst Evol Microbiol | 10.1099/ijs.0.64973-0 | 2007 | |
| Metabolism | Gordonia sihwensis sp. nov., a novel nitrate-reducing bacterium isolated from a wastewater-treatment bioreactor. | Kim KK, Lee CS, Kroppenstedt RM, Stackebrandt E, Lee ST. | Int J Syst Evol Microbiol | 10.1099/ijs.0.02224-0 | 2003 | |
| Phylogeny | Azohydromonas caseinilytica sp. nov., a Nitrogen-Fixing Bacterium Isolated From Forest Soil by Using Optimized Culture Method. | Dahal RH, Chaudhary DK, Kim DU, Kim J | Front Microbiol | 10.3389/fmicb.2021.647132 | 2021 | |
| Phylogeny | Azohydromonas riparia sp. nov. and Azohydromonas ureilytica sp. nov. isolated from a riverside soil in South Korea. | Nguyen TM, Kim J | J Microbiol | 10.1007/s12275-017-6519-z | 2017 | |
| Phylogeny | Caldimonas meghalayensis sp. nov., a novel thermophilic betaproteobacterium isolated from a hot spring of Meghalaya in northeast India. | Rakshak K, Ravinder K, Nupur, Srinivas TN, Kumar PA | Antonie Van Leeuwenhoek | 10.1007/s10482-013-0043-x | 2013 | |
| Phylogeny | Reclassification of Alcaligenes latus strains IAM 12599T and IAM 12664 and Pseudomonas saccharophila as Azohydromonas lata gen. nov., comb. nov., Azohydromonas australica sp. nov. and Pelomonas saccharophila gen. nov., comb. nov., respectively. | Xie CH, Yokota A | Int J Syst Evol Microbiol | 10.1099/ijs.0.63733-0 | 2005 |
| #568 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 1124 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #38379 | ; Curators of the CIP; |
| #50614 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 31482 |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68382 | Automatically annotated from API zym . |
| #116643 | Collection of Institut Pasteur ; Curators of the CIP; CIP 109065 |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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