Cystobacter fuscus M29 is a bacterium that was isolated from soil.
genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Pseudomonadota |
| Class Deltaproteobacteria |
| Order Myxococcales |
| Family Archangiaceae |
| Genus Cystobacter |
| Species Cystobacter fuscus |
| Full scientific name Cystobacter fuscus Schroeter 1886 (Approved Lists 1980) |
| @ref | Gram stain | Confidence | |
|---|---|---|---|
| 125439 | positive | 97.3 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 1010 | VY/2 AGAR (DSMZ Medium 9) | Medium recipe at MediaDive | Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water | ||
| 1010 | SP - MEDIUM (DSMZ Medium 222) | Medium recipe at MediaDive | Name: SP - MEDIUM (DSMZ Medium 222) Composition: Agar 15.0 g/l Starch 5.0 g/l Casitone 2.5 g/l Galactose 1.0 g/l Sucrose 1.0 g/l Raffinose 1.0 g/l MgSO4 x 7 H2O 0.5 g/l K2HPO4 0.25 g/l Distilled water |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 1010 | positive | growth | 30 |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | ||
| 66794 | lipoate biosynthesis | 100 | 5 of 5 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | dolichol and dolichyl phosphate biosynthesis | 100 | 2 of 2 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | butanoate fermentation | 100 | 4 of 4 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | glycogen metabolism | 100 | 5 of 5 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | molybdenum cofactor biosynthesis | 100 | 9 of 9 | ||
| 66794 | starch degradation | 100 | 10 of 10 | ||
| 66794 | glycine betaine biosynthesis | 100 | 5 of 5 | ||
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | ||
| 66794 | denitrification | 100 | 2 of 2 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | ceramide biosynthesis | 100 | 1 of 1 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | threonine metabolism | 100 | 10 of 10 | ||
| 66794 | tetrahydrofolate metabolism | 100 | 14 of 14 | ||
| 66794 | aspartate and asparagine metabolism | 100 | 9 of 9 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | CMP-KDO biosynthesis | 100 | 4 of 4 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | sulfopterin metabolism | 100 | 4 of 4 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | cellulose degradation | 100 | 5 of 5 | ||
| 66794 | chorismate metabolism | 100 | 9 of 9 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | taurine degradation | 100 | 1 of 1 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | ||
| 66794 | NAD metabolism | 88.89 | 16 of 18 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | glutamate and glutamine metabolism | 85.71 | 24 of 28 | ||
| 66794 | photosynthesis | 85.71 | 12 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | propanol degradation | 85.71 | 6 of 7 | ||
| 66794 | leucine metabolism | 84.62 | 11 of 13 | ||
| 66794 | vitamin B1 metabolism | 84.62 | 11 of 13 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | propionate fermentation | 80 | 8 of 10 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | factor 420 biosynthesis | 80 | 4 of 5 | ||
| 66794 | flavin biosynthesis | 80 | 12 of 15 | ||
| 66794 | phenylacetate degradation (aerobic) | 80 | 4 of 5 | ||
| 66794 | alanine metabolism | 79.31 | 23 of 29 | ||
| 66794 | tryptophan metabolism | 78.95 | 30 of 38 | ||
| 66794 | citric acid cycle | 78.57 | 11 of 14 | ||
| 66794 | lipid A biosynthesis | 77.78 | 7 of 9 | ||
| 66794 | purine metabolism | 77.66 | 73 of 94 | ||
| 66794 | urea cycle | 76.92 | 10 of 13 | ||
| 66794 | vitamin B12 metabolism | 76.47 | 26 of 34 | ||
| 66794 | glycolysis | 76.47 | 13 of 17 | ||
| 66794 | histidine metabolism | 75.86 | 22 of 29 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 75 | 6 of 8 | ||
| 66794 | cyclohexanol degradation | 75 | 3 of 4 | ||
| 66794 | ketogluconate metabolism | 75 | 6 of 8 | ||
| 66794 | degradation of sugar alcohols | 75 | 12 of 16 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | arginine metabolism | 75 | 18 of 24 | ||
| 66794 | lipid metabolism | 74.19 | 23 of 31 | ||
| 66794 | oxidative phosphorylation | 73.63 | 67 of 91 | ||
| 66794 | pyrimidine metabolism | 73.33 | 33 of 45 | ||
| 66794 | methionine metabolism | 73.08 | 19 of 26 | ||
| 66794 | metabolism of disaccharids | 72.73 | 8 of 11 | ||
| 66794 | ascorbate metabolism | 72.73 | 16 of 22 | ||
| 66794 | proline metabolism | 72.73 | 8 of 11 | ||
| 66794 | arachidonic acid metabolism | 72.22 | 13 of 18 | ||
| 66794 | glutathione metabolism | 71.43 | 10 of 14 | ||
| 66794 | tyrosine metabolism | 71.43 | 10 of 14 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | non-pathway related | 71.05 | 27 of 38 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 70.59 | 12 of 17 | ||
| 66794 | sulfate reduction | 69.23 | 9 of 13 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | selenocysteine biosynthesis | 66.67 | 4 of 6 | ||
| 66794 | daunorubicin biosynthesis | 66.67 | 6 of 9 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 66.67 | 8 of 12 | ||
| 66794 | phenol degradation | 65 | 13 of 20 | ||
| 66794 | degradation of pentoses | 64.29 | 18 of 28 | ||
| 66794 | lysine metabolism | 64.29 | 27 of 42 | ||
| 66794 | d-xylose degradation | 63.64 | 7 of 11 | ||
| 66794 | carnitine metabolism | 62.5 | 5 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 61.54 | 8 of 13 | ||
| 66794 | Entner Doudoroff pathway | 60 | 6 of 10 | ||
| 66794 | metabolism of amino sugars and derivatives | 60 | 3 of 5 | ||
| 66794 | arachidonate biosynthesis | 60 | 3 of 5 | ||
| 66794 | hydrogen production | 60 | 3 of 5 | ||
| 66794 | carotenoid biosynthesis | 59.09 | 13 of 22 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | aclacinomycin biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | polyamine pathway | 56.52 | 13 of 23 | ||
| 66794 | androgen and estrogen metabolism | 56.25 | 9 of 16 | ||
| 66794 | cysteine metabolism | 55.56 | 10 of 18 | ||
| 66794 | 4-hydroxymandelate degradation | 55.56 | 5 of 9 | ||
| 66794 | allantoin degradation | 55.56 | 5 of 9 | ||
| 66794 | cholesterol biosynthesis | 54.55 | 6 of 11 | ||
| 66794 | 3-phenylpropionate degradation | 53.33 | 8 of 15 | ||
| 66794 | glycolate and glyoxylate degradation | 50 | 3 of 6 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | sphingosine metabolism | 50 | 3 of 6 | ||
| 66794 | coenzyme M biosynthesis | 50 | 5 of 10 | ||
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | grixazone biosynthesis | 50 | 1 of 2 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | lactate fermentation | 50 | 2 of 4 | ||
| 66794 | degradation of sugar acids | 48 | 12 of 25 | ||
| 66794 | isoprenoid biosynthesis | 46.15 | 12 of 26 | ||
| 66794 | phenylpropanoid biosynthesis | 46.15 | 6 of 13 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 45.45 | 5 of 11 | ||
| 66794 | vitamin B6 metabolism | 45.45 | 5 of 11 | ||
| 66794 | degradation of hexoses | 44.44 | 8 of 18 | ||
| 66794 | mevalonate metabolism | 42.86 | 3 of 7 | ||
| 66794 | benzoyl-CoA degradation | 42.86 | 3 of 7 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 40 | 4 of 10 | ||
| 66794 | 3-chlorocatechol degradation | 40 | 2 of 5 | ||
| 66794 | myo-inositol biosynthesis | 40 | 4 of 10 | ||
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | ||
| 66794 | D-cycloserine biosynthesis | 40 | 2 of 5 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | nitrate assimilation | 33.33 | 3 of 9 | ||
| 66794 | chlorophyll metabolism | 27.78 | 5 of 18 | ||
| 66794 | methanogenesis from CO2 | 25 | 3 of 12 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | catecholamine biosynthesis | 25 | 1 of 4 |
| @ref | Sample type | Country | Country ISO 3 Code | Continent | |
|---|---|---|---|---|---|
| 1010 | soil | Canada | CAN | North America |
Global distribution of 16S sequence KP306730 (>99% sequence identity) for Cystobacter from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM33547v2 assembly for Cystobacter fuscus DSM 2262 | contig | 1242864 | 57.3 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Cystobacter fuscus 16S ribosomal RNA gene, complete sequence | M94276 | 1483 | 43 | ||
| 20218 | Cystobacter fuscus gene for 16S rRNA, partial sequence, strain: NBRC 100088 | AB218223 | 1461 | 1242864 | ||
| 20218 | Cystobacter fuscus gene for 16S-23S rRNA internal transcribed spacer regions, partial sequence, strain: NBRC 100088 | AB218258 | 669 | 1242864 | ||
| 1010 | Cystobacter fuscus DSM 2262 16S ribosomal RNA gene, complete sequence | KP306730 | 1524 | 1242864 | ||
| 1010 | Cystobacter fuscus strain DSM 2262 16S ribosomal RNA gene, partial sequence | DQ768109 | 1491 | 1242864 |
| 1010 | GC-content (mol%)68.5 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 64.90 | no |
| 125439 | motility | BacteriaNetⓘ | no | 82.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 97.30 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 85.80 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 86.43 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 91.35 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 68.80 | no |
| 125438 | aerobic | aerobicⓘ | yes | 72.30 | no |
| 125438 | thermophilic | thermophileⓘ | no | 94.15 | no |
| 125438 | flagellated | motile2+ⓘ | yes | 67.41 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Cystobacter fuscus HM-E: a novel biocontrol agent against cotton Verticillium wilt. | Han J, Shi M, Dou X, Pan W, Ma D, Luo M, Fu B. | Front Microbiol | 10.3389/fmicb.2025.1555523 | 2025 | ||
| Genetics | Comparative genomic insight into the myxobacterial carbohydrate-degrading potential. | Saraf N, Sharma G. | Front Microbiol | 10.3389/fmicb.2025.1550287 | 2025 | |
| A novel xylanase from a myxobacterium triggers a plant immune response in Nicotiana benthamiana. | Zhao Y, Yang K, Wang Y, Li X, Xia C, Huang Y, Li Z, Zhu C, Cui Z, Ye X. | Mol Plant Pathol | 10.1111/mpp.13488 | 2024 | ||
| Whole-Genome Sequence of the Fruiting Myxobacterium Cystobacter fuscus DSM 52655. | Treuner-Lange A, Bruckskotten M, Rupp O, Goesmann A, Sogaard-Andersen L. | Genome Announc | 10.1128/genomea.01196-17 | 2017 | ||
| Pathogenicity | 2-Hydroxysorangiadenosine: Structure and Biosynthesis of a Myxobacterial Sesquiterpene-Nucleoside. | Okoth DA, Hug JJ, Garcia R, Sproer C, Overmann J, Muller R. | Molecules | 10.3390/molecules25112676 | 2020 | |
| Investigation of dirigent like domains from bacterial genomes. | Bardin M, Rousselot-Pailley P, Tron T, Robert V. | BMC Bioinformatics | 10.1186/s12859-022-04832-6 | 2022 | ||
| Phylogeny | Comparative Genomics of Myxobacterial Chemosensory Systems. | Sharma G, Khatri I, Subramanian S. | J Bacteriol | 10.1128/jb.00620-17 | 2018 | |
| Genetics | Genomes of Novel Myxococcota Reveal Severely Curtailed Machineries for Predation and Cellular Differentiation. | Murphy CL, Yang R, Decker T, Cavalliere C, Andreev V, Bircher N, Cornell J, Dohmen R, Pratt CJ, Grinnell A, Higgs J, Jett C, Gillett E, Khadka R, Mares S, Meili C, Liu J, Mukhtar H, Elshahed MS, Youssef NH. | Appl Environ Microbiol | 10.1128/aem.01706-21 | 2021 | |
| Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus. | Sharma G, Narwani T, Subramanian S. | PLoS One | 10.1371/journal.pone.0148593 | 2016 | ||
| Epitope Mapping of Pathogenic Autoantigens on Sjögren's Syndrome-Susceptible Human Leukocyte Antigens Using In Silico Techniques. | Gupta S, Li D, Ostrov DA, Nguyen CQ. | J Clin Med | 10.3390/jcm11061690 | 2022 | ||
| Genetics | Metagenomics-Guided Discovery of Potential Bacterial Metallothionein Genes from the Soil Microbiome That Confer Cu and/or Cd Resistance. | Li X, Islam MM, Chen L, Wang L, Zheng X. | Appl Environ Microbiol | 10.1128/aem.02907-19 | 2020 | |
| Metabolism | Genome mining- and synthetic biology-enabled production of hypermodified peptides. | Bhushan A, Egli PJ, Peters EE, Freeman MF, Piel J. | Nat Chem | 10.1038/s41557-019-0323-9 | 2019 | |
| Genetics | Novel LanT associated lantibiotic clusters identified by genome database mining. | Singh M, Sareen D. | PLoS One | 10.1371/journal.pone.0091352 | 2014 | |
| Sterol Synthesis in Diverse Bacteria. | Wei JH, Yin X, Welander PV. | Front Microbiol | 10.3389/fmicb.2016.00990 | 2016 | ||
| Metabolism | AmyM, a Novel Maltohexaose-Forming alpha-Amylase from Corallococcus sp. strain EGB. | Li Z, Wu J, Zhang B, Wang F, Ye X, Huang Y, Huang Q, Cui Z. | Appl Environ Microbiol | 10.1128/aem.03934-14 | 2015 | |
| Phylogeny | Investigating diversity and similarity between CBM13 modules and ricin-B lectin domains using sequence similarity networks. | De Coninck T, Gippert GP, Henrissat B, Desmet T, Van Damme EJM. | BMC Genomics | 10.1186/s12864-024-10554-1 | 2024 | |
| Enzymology | Highly Active Thermophilic L-Asparaginase from Melioribacter roseus Represents a Novel Large Group of Type II Bacterial L-Asparaginases from Chlorobi-Ignavibacteriae-Bacteroidetes Clade. | Dumina M, Zhgun A, Pokrovskaya M, Aleksandrova S, Zhdanov D, Sokolov N, El'darov M. | Int J Mol Sci | 10.3390/ijms222413632 | 2021 | |
| Phylogeny | Phytochrome evolution in 3D: deletion, duplication, and diversification. | Rockwell NC, Lagarias JC. | New Phytol | 10.1111/nph.16240 | 2020 | |
| Enzymology | A Novel L-Asparaginase from Hyperthermophilic Archaeon Thermococcus sibiricus: Heterologous Expression and Characterization for Biotechnology Application. | Dumina M, Zhgun A, Pokrovskaya M, Aleksandrova S, Zhdanov D, Sokolov N, El'darov M. | Int J Mol Sci | 10.3390/ijms22189894 | 2021 | |
| Metabolism | Functional Analysis of a Novel beta-(1,3)-Glucanase from Corallococcus sp. Strain EGB Containing a Fascin-Like Module. | Zhou J, Li Z, Wu J, Li L, Li D, Ye X, Luo X, Huang Y, Cui Z, Cao H. | Appl Environ Microbiol | 10.1128/aem.01016-17 | 2017 | |
| Metabolism | Self-identity barcodes encoded by six expansive polymorphic toxin families discriminate kin in myxobacteria. | Vassallo CN, Wall D. | Proc Natl Acad Sci U S A | 10.1073/pnas.1912556116 | 2019 | |
| Metabolism | De novo synthesis of a sunscreen compound in vertebrates. | Osborn AR, Almabruk KH, Holzwarth G, Asamizu S, LaDu J, Kean KM, Karplus PA, Tanguay RL, Bakalinsky AT, Mahmud T. | Elife | 10.7554/elife.05919 | 2015 | |
| Phylogeny | A phylogenetic analysis of the myxobacteria: basis for their classification. | Shimkets L, Woese CR. | Proc Natl Acad Sci U S A | 10.1073/pnas.89.20.9459 | 1992 | |
| Phylogeny | Characterization and description of Anaeromyxobacter dehalogenans gen. nov., sp. nov., an aryl-halorespiring facultative anaerobic myxobacterium. | Sanford RA, Cole JR, Tiedje JM. | Appl Environ Microbiol | 10.1128/aem.68.2.893-900.2002 | 2002 | |
| Phylogeny | Vitiosangium cumulatum gen. nov., sp. nov. and Vitiosangium subalbum sp. nov., soil myxobacteria, and emended descriptions of the genera Archangium and Angiococcus, and of the family Cystobacteraceae. | Awal RP, Garcia R, Gemperlein K, Wink J, Kunwar B, Parajuli N, Muller R | Int J Syst Evol Microbiol | 10.1099/ijsem.0.001829 | 2017 |
| #1010 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2262 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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