Corynebacterium pyruviciproducens (DSM 45585, ATCC BAA-1742, CCUG 57046)

Name: Corynebacterium pyruviciproducens (DSM 45585, ATCC BAA-1742, CCUG 57046)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 3237

Type strain

Strain Designation 06-17730

Culture col. no. DSM 45585 ATCC BAA-1742 CCUG 57046 JCM 17320 WAL 19168 1 more

NCBI tax ID(s) 1125779 598660

Special Collections DSMZ CCUG JCM Literature strains

History <- CCUG; CCUG 57046 <- S. M. Finegold, Los Angeles, CA, USA <- Olive View, UCLA Medical Center CCUG 57046 <-- S. M. Finegold 06-1773O <-- Olive View-UCLA Med. Center, CA, USA.

Links

Corynebacterium pyruviciproducens 06-17730 is an aerobe, mesophilic, Gram-positive prokaryote that was isolated from human abscess, groin.

Gram-positive rod-shaped aerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 408229

ATCC BAA-1742,JCM 17320,DSM 45585,CCUG 57046

@ref 20215

Last LPSN update 2025-12-16 09:47:30

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Mycobacteriales

Family Corynebacteriaceae

Genus Corynebacterium

Species Corynebacterium pyruviciproducens

Full scientific name Corynebacterium pyruviciproducens Tong et al. 2010

BacDive ID	Other strains from **Corynebacterium pyruviciproducens** (9)	Type strain
151524	C. pyruviciproducens CCUG 44216
151538	C. pyruviciproducens CCUG 44256 A
153338	C. pyruviciproducens CCUG 49272
155359	C. pyruviciproducens CCUG 57455
155593	C. pyruviciproducens CCUG 58288
156608	C. pyruviciproducens CCUG 63498
156743	C. pyruviciproducens CCUG 64739
156744	C. pyruviciproducens CCUG 64740
156745	C. pyruviciproducens CCUG 64741

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
29374	positive	rod-shaped
125439	positive		95.2
125438			93.5

Colony morphology

61173

Incubation period2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
17715	TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a)		Medium recipe at MediaDive	Name: TRYPTICASE SOY BROTH AGAR+BLOOD (DSMZ Medium 535a) Composition: None 50.0 g/l Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
17715	positive	growth	37	mesophilic
29374	positive	growth	37-42
29374	positive	optimum	37	mesophilic
61173	positive	growth	37	mesophilic
67770	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
29374	aerobe
61173	microaerophile

Spore formation

29374

Spore formationno

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	-	hydrolysis	from API Coryne
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
29374	17234 ChEBI	glucose	+	carbon source
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
29374	17306 ChEBI	maltose	+	carbon source
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
29374	33942 ChEBI	ribose	+	carbon source
29374	17992 ChEBI	sucrose	+	carbon source
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
29374	18222 ChEBI	xylose	+	carbon source

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	-	3.2.1.23	from API zym
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68379	beta-glucosidase	-	3.2.1.21	from API Coryne
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	+	3.2.1.31	from API zym
68379	beta-glucuronidase	+	3.2.1.31	from API Coryne
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase lipase (C 8)	+		from API zym
68379	gelatinase	-		from API Coryne
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
29374	pyrazinamidase	+	3.5.1.B15
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68379	pyrrolidonyl arylamidase	-	3.4.19.3	from API Coryne
68382	trypsin	-	3.4.21.4	from API zym
68379	urease	-	3.5.1.5	from API Coryne
68382	valine arylamidase	-		from API zym

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
17715	-	-	-	-	+	-	-	-	-	-	-	-	+	+/-	+/-	-	+/-	-	+/-	-	not determinedn.d.

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
17715	-	-	+/-	+	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	-	-
#Host Body-Site	#Other	#Abscess

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
17715	human abscess, groin		Los Angeles, UCLA Medical Center	USA	USA	North America
61173	Human abscess,groin	2006	CA,Los Angeles	USA	USA	North America
67770	Groin abscess specimen		Olive View-UCLA Medical Center, Sylma, CA	USA	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence FJ185225 (>99% sequence identity) for Corynebacterium pyruviciproducens subclade from Microbeatlas

Aquatic Samples	434
Soil Samples	198
Animal Samples	17530
Plant Samples	91
Total Samples	18253

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
17715	yes, in single cases	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	Cory_pyru_17730_V1 assembly for Corynebacterium pyruviciproducens ATCC BAA-1742	scaffold	GCA_000411375	1125779.3	2541047000	1125779	75.21

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
17715	Corynebacterium pyruviciproducens ATCC BAA-1742 16S ribosomal RNA gene, partial sequence	FJ185225	1409		1125779

GC content

@ref	GC-content (mol%)	Method
17715	62
67770	62	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Corynebacterium pyruviciproducens ATCC BAA-1742
NCBI: GCA_000411375

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	59.60	no
125439	motility	BacteriaNetⓘ	no	87.10	no
125439	gram_stain	BacteriaNetⓘ	positive	95.20	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	85.60	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Corynebacterium pyruviciproducens ATCC BAA-1742 ATCC BAA-1742
NCBI: GCA_000411375.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.70	no
125438	anaerobic	anaerobicⓘ	no	86.88	no
125438	aerobic	aerobicⓘ	no	65.35	no
125438	spore-forming	spore-formingⓘ	no	77.76	yes
125438	thermophilic	thermophileⓘ	no	93.40	yes
125438	flagellated	motile2+ⓘ	no	93.50	yes

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genomic and phenotypic analysis of a novel clinical isolate of Corynebacterium pyruviciproducens.	Wang J, Feng J, Jia W, Yuan T, He X, Wu Q, Peng F, Gao W, Yang Z, Tao Y, Li Q.	BMC Microbiol	10.1186/s12866-023-03075-6	2023
	Vaginal microbial profile of cervical cancer patients receiving chemoradiotherapy: the potential involvement of Lactobacillus iners in recurrence.	Wang Y, Wang T, Yan D, Zhao H, Wang M, Liu T, Fan X, Xu X.	J Transl Med	10.1186/s12967-024-05332-2	2024
Metabolism	Distribution and Evolutionary History of Sialic Acid Catabolism in the Phylum Actinobacteria.	Li Y, Huang Y.	Microbiol Spectr	10.1128/spectrum.02380-21	2022
	Phylogenomic Reappraisal of Fatty Acid Biosynthesis, Mycolic Acid Biosynthesis and Clinical Relevance Among Members of the Genus Corynebacterium.	Dover LG, Thompson AR, Sutcliffe IC, Sangal V.	Front Microbiol	10.3389/fmicb.2021.802532	2021
	CP and CP-PGN protect mice against MRSA infection by inducing M1 macrophages.	Zhang Y, Li XX, Ma Y, Xu J, Zhao LN, Qian XF, Zhang XF, Shi JF, Han QZ.	Sci Rep	10.1038/s41598-017-17001-0	2017
	Acute Bacterial Prostatitis in a 12-Year-Old Boy Without Any Underlying Disease.	Kinoshita K, Suzuki M, Koketsu M, Fukasawa T, Kubota T.	Cureus	10.7759/cureus.60900	2024
	Investigating Skin Microbial Community in Malignant Melanoma Lesions.	Properzi M, Dimartino V, Pietrucci D, Fontana C, Rotondo C, Lembo L, Ricci F, Scatozza F, Di Lella G, Messina F, Chillemi G, Bartolini B, Facchiano A.	Microorganisms	10.3390/microorganisms13050992	2025
	[Corynebacterium pyruviciproducens and Corynebacterium amycolatum mastitis in immunocompetent no breastfeeding women].	Fernandez LV, Fortuny AS, Rodriguez EF.	Rev Argent Microbiol	10.1016/j.ram.2020.06.006	2021
	Clinical Value of Metagenomics Next-Generation Sequencing in Antibiotic Resistance of a Patient with Severe Refractory Mycoplasma pneumoniae Pneumonia: A Case Report.	Lin L, Zhang R, Zhang Z, Chang Y, Lin R, Dou H, Wang H, Wang Y, Zheng B.	Infect Drug Resist	10.2147/idr.s419873	2023
Phylogeny	Bacterial contamination of medical face mask wearing duration and the optimal wearing time.	Ding G, Li G, Liu M, Sun P, Ren D, Zhao Y, Gao T, Yang G, Fang Y, Li W.	Front Cell Infect Microbiol	10.3389/fcimb.2023.1231248	2023
	In-depth Microbiological Characterization of Urine From Subjects With Type 2 Diabetes.	Calvigioni M, Biancalana E, Mazzantini D, Celandroni F, Rossi C, Mengozzi A, Ghelardi E, Solini A.	J Clin Endocrinol Metab	10.1210/clinem/dgae389	2024
	Characteristics and Clinical Significance of Gut Microbiota in Patients with Invasive Pulmonary Aspergillosis.	Cao J, He Q, Zhang M, Zhou R, Feng C.	Pol J Microbiol	10.33073/pjm-2025-011	2025
	The effects of fresh mango consumption on gut health and microbiome - Randomized controlled trial.	Asuncion P, Liu C, Castro R, Yon V, Rosas M, Hooshmand S, Kern M, Hong MY.	Food Sci Nutr	10.1002/fsn3.3243	2023
Phylogeny	Microbiota analysis of perimenopausal women experiencing recurrent vaginitis in conjunction with urinary tract infection.	Bi Y, Wang Y, Li W, Chen Y, Qin J, Zheng H.	BMC Microbiol	10.1186/s12866-024-03709-3	2025
Pathogenicity	Exploring the vaginal ecosystem: insights into host-microbe interactions and microbial community dynamics.	Landolt EF, da Conceicao Mendonca J, Behler AE, Lumsdaine SW, Jafar T, Burcham LR.	Infect Immun	10.1128/iai.00499-24	2025
	Moderate intensity exercise may protect cardiac function by influencing spleen microbiome composition.	Xiao J, Chen X, Guo W, Li Y, Liu J.	iScience	10.1016/j.isci.2023.108635	2024
	Endometriosis specific vaginal microbiota links to urine and serum N-glycome.	MacSharry J, Kovacs Z, Xie Y, Adamczyk B, Walsh C, Reidy F, McAuliffe FM, Kilbane MT, Twomey PJ, Rudd PM, Wingfield M, Butler M, van Sinderen D, Glover L, Saldova R.	Sci Rep	10.1038/s41598-024-76125-2	2024
	Corynebacterium pyruviciproducens, as an immune modulator, can promote the activity of macrophages and up-regulate antibody response to particulate antigen.	Tong J, Han Q, Wang S, Su Z, Zheng D, Shen P, Xia S, Huang X, Shao Q, Xu H.	Exp Biol Med (Maywood)	10.1258/ebm.2012.012181	2012
	Gut microbial ecology and exposome of a healthy Pakistani cohort.	Gul F, Herrema H, Davids M, Keating C, Nasir A, Ijaz UZ, Javed S.	Gut Pathog	10.1186/s13099-024-00596-x	2024
	Evaluation of methods for the reduction of contaminating host reads when performing shotgun metagenomic sequencing of the milk microbiome.	Yap M, Feehily C, Walsh CJ, Fenelon M, Murphy EF, McAuliffe FM, van Sinderen D, O'Toole PW, O'Sullivan O, Cotter PD.	Sci Rep	10.1038/s41598-020-78773-6	2020
	Corynebacterium pyruviciproducens promotes the production of ovalbumin specific antibody via stimulating dendritic cell differentiation and up-regulating Th2 biased immune response.	Qingzhen H, Jia T, Shengjun W, Yang Z, Yanfang L, Pei S, Essien BS, Zhaoliang S, Sheng X, Qixiang S, Finegold SM, Xu H.	Vaccine	10.1016/j.vaccine.2011.12.005	2012
Phylogeny	Role of Williamsia and Segniliparus in human infections with the approach taxonomy, cultivation, and identification methods.	Fatahi-Bafghi M.	Ann Clin Microbiol Antimicrob	10.1186/s12941-021-00416-z	2021
Metabolism	The changes of microbial diversity and flavor compounds during the fermentation of millet Huangjiu, a traditional Chinese beverage.	Yan Y, Chen H, Sun L, Zhang W, Lu X, Li Z, Xu J, Ren Q.	PLoS One	10.1371/journal.pone.0262353	2022
	Characterization of the microbiome and volatile compounds in anal gland secretions from domestic cats (Felis catus) using metagenomics and metabolomics.	Rojas CA, Marks SL, Borras E, Lesea H, McCartney MM, Coil DA, Davis CE, Eisen JA.	Sci Rep	10.1038/s41598-023-45997-1	2023
	Dietary enrichment of resistant starches or fibers differentially alter the feline fecal microbiome and metabolite profile.	Lee AH, Jha AR, Do S, Scarsella E, Shmalberg J, Schauwecker A, Steelman AJ, Honaker RW, Swanson KS.	Anim Microbiome	10.1186/s42523-022-00213-9	2022
	Vaginal and neonatal microbiota in pregnant women with preterm premature rupture of membranes and consecutive early onset neonatal sepsis.	Dos Anjos Borges LG, Pastuschek J, Heimann Y, Dawczynski K, PEONS study group, Schleussner E, Pieper DH, Zollkau J.	BMC Med	10.1186/s12916-023-02805-x	2023
Phylogeny	SEPATH: benchmarking the search for pathogens in human tissue whole genome sequence data leads to template pipelines.	Gihawi A, Rallapalli G, Hurst R, Cooper CS, Leggett RM, Brewer DS.	Genome Biol	10.1186/s13059-019-1819-8	2019
Genetics	Clinical metagenomics of bone and joint infections: a proof of concept study.	Ruppe E, Lazarevic V, Girard M, Mouton W, Ferry T, Laurent F, Schrenzel J.	Sci Rep	10.1038/s41598-017-07546-5	2017
	The Urethral Microbiota of Men with and without Idiopathic Urethritis.	Plummer EL, Ratten LK, Vodstrcil LA, Murray GL, Danielewski JA, Fairley CK, Garland SM, Chow EPF, Bradshaw CS.	mBio	10.1128/mbio.02213-22	2022
Enzymology	Evaluation of the Bruker MALDI Biotyper for identification of Gram-positive rods: development of a diagnostic algorithm for the clinical laboratory.	Schulthess B, Bloemberg GV, Zbinden R, Bottger EC, Hombach M.	J Clin Microbiol	10.1128/jcm.02399-13	2014
Phylogeny	Extended characterization of Corynebacterium pyruviciproducens based on clinical strains from Canada and Switzerland.	Goldenberger D, Hinic V, Turan S, Schultheiss E, Pacheco AL, Frei R, Bernard K	J Clin Microbiol	10.1128/JCM.00792-14	2014
Phylogeny	Corynebacterium pyruviciproducens sp. nov., a pyruvic acid producer.	Tong J, Liu C, Summanen PH, Xu H, Finegold SM	Int J Syst Evol Microbiol	10.1099/ijs.0.011783-0	2009

References

#17715	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45585
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#25782	IJSEM 1135 2010 ( DOI 10.1099/ijs.0.011783-0 , PubMed 19666798 )
#29374	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25782
#61173	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 57046
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68379	Automatically annotated from API Coryne .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Corynebacterium pyruviciproducens (DSM 45585, ATCC BAA-1742, CCUG 57046)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Metabolite utilization

Enzymes

API coryne

API zym

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000411375

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media