Lampropedia hyalina (DSM 16112, ATCC 11041, CCUG 48573)

Name: Lampropedia hyalina (DSM 16112, ATCC 11041, CCUG 48573)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2975

Type strain

Culture col. no. DSM 16112 ATCC 11041 CCUG 48573 IAM 14890 CIP 108560 2 more

NCBI tax ID(s) 1122156 198706

Special Collections DSMZ CCUG JCM CIP

History DSMZ <- N. Lee, Techn. Univ. München <- ATCC <- E. G. Pringsheim JCM <-- IAM 14890 <-- ATCC 11041 <-- E. G. Pringsheim. CIP <- 2004, CCUG <- 2003, N. Lee, LS Mikrobiologie TUM, Freising, Germany <- ATCC <- E. G. Pringsheim

Links

Lampropedia hyalina DSM 16112 is an aerobe, Gram-negative, coccus-shaped bacterium that was isolated from liquid manure from a dairy farmyard.

Gram-negative coccus-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 265443

ATCC 11041,IAM 14890,KCTC 2631,KCTC 2698,DSM 16112,CCUG 48573,CIP 108560,NBRC 102468,JCM 21380

@ref 20215

Last LPSN update 2026-05-29 08:25:36

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Lampropedia

Species Lampropedia hyalina

Full scientific name Lampropedia hyalina (Ehrenberg 1832) Schroeter 1886 (Approved Lists 1980)

Synonyms (1)

Gonium hyalinum

BacDive ID	Other strains from **Lampropedia hyalina** (3)	Type strain
2974	L. hyalina LSCC94, DSM 15336
153143	L. hyalina CCUG 48574, UWO 440, ATCC 43383
163187	L. hyalina JCM 21441, ATCC 13871, IAM 14970

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
119994	negative	coccus-shaped
125438	negative			96.967

Pigmentation

@ref	Production	Name
119994		Pyocyanin

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
6300	REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c)	Medium recipe at MediaDive	Name: REACTIVATION WITH LIQUID MEDIUM 830 (DSMZ Medium 830c) Composition: Agar 15.0 g/l Yeast extract 0.5 g/l Proteose peptone 0.5 g/l Casamino acids 0.5 g/l Glucose 0.5 g/l Starch 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
40019	MEDIUM 566- Reasoner's 2A agar for Flavobacterium micromati		Distilled water make up to (1000.000 ml);R2A agar (18.200 g)
119994	CIP Medium 566	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
6300	positive	growth	30
40019	positive	growth	30
58234	positive	growth	30
67770	positive	growth	25
119994	positive	growth	25-37
119994	negative	growth	5
119994	negative	growth	10
119994	negative	growth	41

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
58234	aerobe
125439	facultative anaerobe	96.844

Spore formation

@ref	Spore formation	Confidence
125439		99.26

Halophily

@ref	Salt	Growth	Tested relation	Concentration
119994	NaCl	positive	growth	0 %
119994	NaCl		growth	2 %
119994	NaCl		growth	4 %
119994	NaCl		growth	6 %
119994	NaCl		growth	8 %
119994	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
119994	16947 ChEBI	citrate	-	carbon source
119994	4853 ChEBI	esculin	-	hydrolysis
119994	17632 ChEBI	nitrate	-	reduction
119994	16301 ChEBI	nitrite	-	reduction

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
119994	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
119994	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
119994	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
119994	amylase	-
68382	beta-galactosidase	-	3.2.1.23	from API zym
119994	beta-galactosidase	-	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
119994	caseinase	-	3.4.21.50
119994	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
119994	DNase	-
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
119994	gelatinase	-
119994	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
119994	lipase	-
68382	lipase (C 14)	-		from API zym
119994	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
119994	ornithine decarboxylase	-	4.1.1.17
119994	oxidase	+
119994	protease	-
68382	trypsin	-	3.4.21.4	from API zym
119994	tryptophan deaminase	-
119994	tween esterase	-
119994	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	formaldehyde oxidation	100	3 of 3
66794	adipate degradation	100	2 of 2
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	enterobactin biosynthesis	100	3 of 3
66794	ppGpp biosynthesis	100	4 of 4
66794	gallate degradation	100	5 of 5
66794	coenzyme A metabolism	100	4 of 4
66794	palmitate biosynthesis	100	22 of 22
66794	methylglyoxal degradation	100	5 of 5
66794	valine metabolism	100	9 of 9
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	folate polyglutamylation	100	1 of 1
66794	taurine degradation	100	1 of 1
66794	NAD metabolism	94.44	17 of 18
66794	threonine metabolism	90	9 of 10
66794	propionate fermentation	90	9 of 10
66794	chorismate metabolism	88.89	8 of 9
66794	lipid A biosynthesis	88.89	8 of 9
66794	CO2 fixation in Crenarchaeota	88.89	8 of 9
66794	isoleucine metabolism	87.5	7 of 8
66794	heme metabolism	85.71	12 of 14
66794	citric acid cycle	85.71	12 of 14
66794	photosynthesis	85.71	12 of 14
66794	propanol degradation	85.71	6 of 7
66794	peptidoglycan biosynthesis	80	12 of 15
66794	lipoate biosynthesis	80	4 of 5
66794	phenylacetate degradation (aerobic)	80	4 of 5
66794	ethylmalonyl-CoA pathway	80	4 of 5
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	d-mannose degradation	77.78	7 of 9
66794	vitamin B1 metabolism	76.92	10 of 13
66794	phenylalanine metabolism	76.92	10 of 13
66794	acetate fermentation	75	3 of 4
66794	butanoate fermentation	75	3 of 4
66794	sulfopterin metabolism	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	CMP-KDO biosynthesis	75	3 of 4
66794	gluconeogenesis	75	6 of 8
66794	C4 and CAM-carbon fixation	75	6 of 8
66794	flavin biosynthesis	73.33	11 of 15
66794	cysteine metabolism	72.22	13 of 18
66794	glutamate and glutamine metabolism	71.43	20 of 28
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	leucine metabolism	69.23	9 of 13
66794	purine metabolism	69.15	65 of 94
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	serine metabolism	66.67	6 of 9
66794	octane oxidation	66.67	2 of 3
66794	cyanate degradation	66.67	2 of 3
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	3-phenylpropionate degradation	66.67	10 of 15
66794	tryptophan metabolism	65.79	25 of 38
66794	non-pathway related	65.79	25 of 38
66794	alanine metabolism	65.52	19 of 29
66794	urea cycle	61.54	8 of 13
66794	lipid metabolism	61.29	19 of 31
66794	oxidative phosphorylation	60.44	55 of 91
66794	pyrimidine metabolism	60	27 of 45
66794	phenol degradation	60	12 of 20
66794	glycine betaine biosynthesis	60	3 of 5
66794	vitamin K metabolism	60	3 of 5
66794	histidine metabolism	58.62	17 of 29
66794	methionine metabolism	57.69	15 of 26
66794	allantoin degradation	55.56	5 of 9
66794	proline metabolism	54.55	6 of 11
66794	4-hydroxyphenylacetate degradation	50	5 of 10
66794	ethanol fermentation	50	1 of 2
66794	lysine metabolism	50	21 of 42
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	phenylmercury acetate degradation	50	1 of 2
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	glycolate and glyoxylate degradation	50	3 of 6
66794	glutathione metabolism	50	7 of 14
66794	suberin monomers biosynthesis	50	1 of 2
66794	glycogen biosynthesis	50	2 of 4
66794	glycolysis	47.06	8 of 17
66794	sulfate reduction	46.15	6 of 13
66794	arginine metabolism	45.83	11 of 24
66794	vitamin B6 metabolism	45.45	5 of 11
66794	pentose phosphate pathway	45.45	5 of 11
66794	4-hydroxymandelate degradation	44.44	4 of 9
66794	vitamin B12 metabolism	44.12	15 of 34
66794	androgen and estrogen metabolism	43.75	7 of 16
66794	polyamine pathway	43.48	10 of 23
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	mevalonate metabolism	42.86	3 of 7
66794	tyrosine metabolism	42.86	6 of 14
66794	creatinine degradation	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	starch degradation	40	4 of 10
66794	glycine metabolism	40	4 of 10
66794	isoprenoid biosynthesis	38.46	10 of 26
66794	ketogluconate metabolism	37.5	3 of 8
66794	carotenoid biosynthesis	36.36	8 of 22
66794	cholesterol biosynthesis	36.36	4 of 11
66794	selenocysteine biosynthesis	33.33	2 of 6
66794	nitrate assimilation	33.33	3 of 9
66794	IAA biosynthesis	33.33	1 of 3
66794	degradation of hexoses	33.33	6 of 18
66794	pantothenate biosynthesis	33.33	2 of 6
66794	degradation of pentoses	32.14	9 of 28
66794	degradation of sugar alcohols	31.25	5 of 16
66794	coenzyme M biosynthesis	30	3 of 10
66794	Entner Doudoroff pathway	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	metabolism of disaccharids	27.27	3 of 11
66794	degradation of aromatic, nitrogen containing compounds	25	3 of 12
66794	biotin biosynthesis	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	alginate biosynthesis	25	1 of 4
66794	vitamin E metabolism	25	1 of 4
66794	phenylpropanoid biosynthesis	23.08	3 of 13
66794	arachidonic acid metabolism	22.22	4 of 18

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
119994	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
119994	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	+	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Agriculture	#Livestock (Husbandry)
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
6300	liquid manure from a dairy farmyard	Cambridge	United Kingdom	GBR	Europe
58234	Water,polluted
67770	Rumen fluid
119994	Environment, Water, polluted

Taxonmaps

69479

Global distribution of 16S sequence AY291120 (>99% sequence identity) for Lampropedia hyalina subclade from Microbeatlas

Aquatic Samples	1100
Soil Samples	72
Animal Samples	80
Plant Samples	24
Total Samples	1276

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6300	1	Risk group (German classification) According to TRBA 466
119994	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2582581266 annotated assembly for Lampropedia hyalina DSM 16112	scaffold	GCA_900129055	1122156.3	2582581266	1122156	59.9

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Lampropedia hyalina gene for 16S rRNA, partial sequence	AB092691	1459	198706
6300	Lampropedia hyalina strain ATCC 11041 16S ribosomal RNA gene, partial sequence	AY291120	1477	198706
67770	Lampropedia hyalina gene for 16S ribosomal RNA, complete sequence, strain:IAM 14890	AB089485	1483	198706
124043	Lampropedia hyalina gene for 16S rRNA, partial sequence, strain: NBRC 102468.	AB681810	1459	198706

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2582581266 annotated assembly for Lampropedia hyalina DSM 16112
BV-BRC: 1122156.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	96.84	no
125439	gram_stain	BacteriaNetⓘ	negative	86.38	no
125439	motility	BacteriaNetⓘ	no	65.86	no
125439	spore_formation	BacteriaNetⓘ	no	99.26	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Lampropedia hyalina DSM 16112
PATRIC: 1122156.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.97	no
125438	anaerobic	anaerobicⓘ	no	93.51	yes
125438	spore-forming	spore-formingⓘ	no	87.88	no
125438	aerobic	aerobicⓘ	yes	77.00	yes
125438	thermophilic	thermophileⓘ	no	94.70	yes
125438	flagellated	motile2+ⓘ	no	60.62	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Periplasmic binding proteins Bug69 and Bug27 from Bordetella pertussis are in vitro high-affinity quinolinate binders with a potential role in NAD biosynthesis.	Sorci L, Minazzato G, Amici A, Mazzola F, Raffaelli N.	FEBS Open Bio	10.1002/2211-5463.13876	2024
	Network of nicotinamide mononucleotide biosynthesis: substrate tracking, rate-limiting enzyme, and regulatory strategy	Zhang P, Ye Z, Tian Z, Liu Q, Huang Y.	Synth Syst Biotechnol		2025
	In vitro biosynthesis of ATP from adenosine and polyphosphate.	Sun C, Li Z, Ning X, Xu W, Li Z.	Bioresour Bioprocess	10.1186/s40643-021-00469-0	2021
Genetics	Kelpie: generating full-length 'amplicons' from whole-metagenome datasets.	Greenfield P, Tran-Dinh N, Midgley D.	PeerJ	10.7717/peerj.6174	2019
Phylogeny	Emended description of the species Lampropedia hyalina.	Lee N, Cellamare CM, Bastianutti C, Rossello-Mora R, Kampfer P, Ludwig W, Schleifer KH, Stante L	Int J Syst Evol Microbiol	10.1099/ijs.0.02885-0	2004
Phylogeny	Paralcaligenes ureilyticus gen. nov., sp. nov. isolated from soil of a Korean ginseng field.	Kim SJ, Yoo SH, Weon HY, Kim YS, Anandham R, Suh JS, Kwon SW.	J Microbiol	10.1007/s12275-011-0076-7	2011
Phylogeny	Lampropedia cohaerens sp. nov., a biofilm-forming bacterium isolated from microbial mats of a hot water spring, and emended description of the genus Lampropedia.	Tripathi C, Mahato NK, Singh AK, Kamra K, Korpole S, Lal R	Int J Syst Evol Microbiol	10.1099/ijsem.0.000853	2015
Phylogeny	Lampropedia puyangensis sp. nov., isolated from symptomatic bark of Populus x euramericana canker and emended description of Lampropedia hyalina (Ehrenberg 1832) Lee et al. 2004.	Li Y, Wang T, Piao CG, Wang LF, Tian GZ, Zhu TH, Guo MW	Antonie Van Leeuwenhoek	10.1007/s10482-015-0483-6	2015

References

#6300	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16112
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#40019	; Curators of the CIP;
#58234	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 48573
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#119994	Collection of Institut Pasteur ; Curators of the CIP; CIP 108560
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Content

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Lampropedia hyalina (DSM 16112, ATCC 11041, CCUG 48573)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Enzymes

Pathway annotation

API zym

API biotype100

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900129055

16S sequences

Genome-based predictions

Predictions

Literature

Literature

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