Sporosalibacterium faouarense (DSM 21485, JCM 15487, SOL3f37)

Name: Sporosalibacterium faouarense (DSM 21485, JCM 15487, SOL3f37)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2873

Type strain

Strain Designation SOL3f37

Culture col. no. DSM 21485 JCM 15487 SOL3f37 KCTC 15135

NCBI tax ID(s) 516123

Special Collections DSMZ JCM KCTC Literature strains

Links

Sporosalibacterium faouarense SOL3f37 is an anaerobe, spore-forming, thermophilic prokaryote that was isolated from hydrocarbon-polluted soil.

spore-forming Gram-positive motile ovoid-shaped anaerobe thermophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 397495

JCM 15487,DSM 21485

@ref 20215

Last LPSN update 2025-12-16 09:47:24

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Tissierellales

Family Thermohalobacteraceae

Genus Sporosalibacterium

Species Sporosalibacterium faouarense

Full scientific name Sporosalibacterium faouarense Rezgui et al. 2011

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
29643	positive	7.5 µm	0.5 µm	ovoid-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
15736	SPOROSALIBACTERIUM MEDIUM (DSMZ Medium 1106)		Medium recipe at MediaDive	Name: SPOROSALIBACTERIUM MEDIUM (DSMZ Medium 1106) Composition: NaCl 40.0 g/l D-Glucose 3.6 g/l MgCl2 x 6 H2O 3.0 g/l Yeast extract 2.0 g/l Trypticase peptone 2.0 g/l Na2CO3 1.0 g/l NH4Cl 1.0 g/l Na2S x 9 H2O 0.5 g/l KCl 0.5 g/l L-Cysteine HCl x H2O 0.5 g/l CaCl2 x 2 H2O 0.2 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
15736	positive	growth	40	thermophilic
29643	positive	growth	20-48
29643	positive	optimum	40	thermophilic
67770	positive	growth	37	mesophilic

Culture pH

@ref	Ability	Type	PH
29643	positive	optimum	6.9
29643	positive	growth	6.2-8.1

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
15736	anaerobe
29643	anaerobe
125439	anaerobe

Spore formation

29643

Spore formationyes

Halophily

@ref	Salt	Growth	Tested relation	Concentration
29643	NaCl	positive	growth	0-15 %
29643	NaCl	positive	optimum	4 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
29643	28757 ChEBI	fructose	+	carbon source
29643	17234 ChEBI	glucose	+	carbon source
29643	29864 ChEBI	mannitol	+	carbon source
29643	15361 ChEBI	pyruvate	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2
#Engineered	#Contamination
#Environmental	#Terrestrial

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
15736	hydrocarbon-polluted soil	Gbelli, El Faouar area, south Tunisia	Tunisia	TUN	Africa
67770	Hydrocarbon-polluted soil surrounding a deep petroleum environment located in south Tunisia

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
15736	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM1676569v1 assembly for Sporosalibacterium faouarense SOL3f37	contig	GCA_016765695	516123.3	2994817734	516123	55.06

Genome browser: GCA_016765695

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
15736	Sporosalibacterium faouarense strain SOL3F37 16S ribosomal RNA gene, partial sequence	EU567322	1497		516123

GC content

@ref	GC-content (mol%)	Method
15736	30.7	high performance liquid chromatography (HPLC)
29643	30.7

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Sporosalibacterium faouarense SOL3f37
NCBI: GCA_016765695

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	78.20	no
125439	motility	BacteriaNetⓘ	yes	73.40	no
125439	gram_stain	BacteriaNetⓘ	positive	75.90	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	99.00	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Sporosalibacterium faouarense SOL3f37
NCBI: GCA_016765695.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	69.02	yes
125438	anaerobic	anaerobicⓘ	yes	85.99	no
125438	aerobic	aerobicⓘ	no	90.79	no
125438	spore-forming	spore-formingⓘ	yes	78.45	yes
125438	thermophilic	thermophileⓘ	no	77.89	yes
125438	flagellated	motile2+ⓘ	yes	75.33	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Brassicibacter mesophilus gen. nov., sp. nov., a strictly anaerobic bacterium isolated from food industry wastewater.	Fang MX, Zhang WW, Zhang YZ, Tan HQ, Zhang XQ, Wu M, Zhu XF	Int J Syst Evol Microbiol	10.1099/ijs.0.034660-0	2012
Phylogeny	Sporosalibacterium faouarense gen. nov., sp. nov., a moderately halophilic bacterium isolated from oil-contaminated soil.	Rezgui R, Ben Ali Gam Z, Ben Hamed S, Fardeau ML, Cayol JL, Maaroufi A, Labat M	Int J Syst Evol Microbiol	10.1099/ijs.0.017715-0	2010

References

#15736	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 21485
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#29643	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26032 (see below)
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Sporosalibacterium faouarense (DSM 21485, JCM 15487, SOL3f37)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_016765695

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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