Mediterraneibacter glycyrrhizinilyticus (DSM 17593, JCM 13368, ZM35)

Name: Mediterraneibacter glycyrrhizinilyticus (DSM 17593, JCM 13368, ZM35)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 2835

Type strain

Strain Designation ZM35

Culture col. no. DSM 17593 JCM 13368 ZM35

NCBI tax ID(s) 342942

Special Collections DSMZ JCM

History <- J. M. Sakamoto, JCM; ZM35 K. Sakuma ZM35.

Links

Mediterraneibacter glycyrrhizinilyticus ZM35 is an anaerobe bacterium that was isolated from human feces from a healthy 51 years old man.

anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 389269

KCTC 5760,JCM13368,DSM 17593

@ref 20215

Last LPSN update 2026-02-09 11:18:22

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Lachnospiraceae

Genus Mediterraneibacter

Species Mediterraneibacter glycyrrhizinilyticus

Full scientific name Mediterraneibacter glycyrrhizinilyticus (Sakuma et al. 2006) Togo et al. 2019

Synonyms (1)

Clostridium glycyrrhizinilyticum

BacDive ID	Other strains from **Mediterraneibacter glycyrrhizinilyticus** (1)	Type strain
161350	M. glycyrrhizinilyticus JCM 13369

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
7078	PY + X MEDIUM (DSMZ Medium 104b)		Medium recipe at MediaDive	Name: PY + X MEDIUM (DSMZ Medium 104b) Composition: Yeast extract 10.0 g/l D-Glucose 5.0 g/l Trypticase peptone 5.0 g/l Meat peptone 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l KH2PO4 0.04 g/l K2HPO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Sodium resazurin 0.0005 g/l Distilled water
7078	CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)		Medium recipe at MediaDive	Name: CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110) Composition: Ground beef 500.0 g/l Casitone 30.0 g/l Agar 15.0 g/l K2HPO4 5.0 g/l Yeast extract 5.0 g/l D-Glucose 4.0 g/l Starch 1.0 g/l Maltose 1.0 g/l Cellobiose 1.0 g/l L-Cysteine HCl 0.5 g/l Ethanol 0.19 g/l Vitamin K3 0.05 g/l Hemin 0.005 g/l Sodium resazurin 0.0005 g/l Vitamin K1 NaOH Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
7078	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

7078

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Gastrointestinal tract	#Feces (Stool)

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
7078	human feces from a healthy 51 years old man	Japan	JPN	Asia
67770	Human feces

Taxonmaps

69479

Global distribution of 16S sequence AB233029 (>99% sequence identity) for Mediterraneibacter glycyrrhizinilyticus subclade from Microbeatlas

Aquatic Samples	57
Soil Samples	28
Animal Samples	7055
Plant Samples	5
Total Samples	7145

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
7078	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
7078	Clostridium glycyrrhizinilyticum gene for 16S ribosomal RNA	AB233029	1493		342942

GC content

@ref	GC-content (mol%)	Method
7078	45.7
67770	45.7	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Mediterraneibacter massiliensis, gen. nov., sp. nov., a new genus isolated from the gut microbiota of an obese patient and reclassification of Ruminococcus faecis, Ruminococcus lactaris, Ruminococcus torques, Ruminococcus gnavus and Clostridium glycyrrhizinilyticum as Mediterraneibacter faecis comb. nov., Mediterraneibacter lactaris comb. nov., Mediterraneibacter torques comb. nov., Mediterraneibacter gnavus comb. nov. and Mediterraneibacter glycyrrhizinilyticus comb. nov.	Togo AH, Diop A, Bittar F, Maraninchi M, Valero R, Armstrong N, Dubourg G, Labas N, Richez M, Delerce J, Levasseur A, Fournier PE, Raoult D, Million M	Antonie Van Leeuwenhoek	10.1007/s10482-018-1104-y	2018
Phylogeny	Clostridium glycyrrhizinilyticum sp. nov., a glycyrrhizin-hydrolysing bacterium isolated from human faeces.	Sakuma K, Kitahara M, Kibe R, Sakamoto M, Benno Y	Microbiol Immunol	10.1111/j.1348-0421.2006.tb03818.x	2006

References

#7078	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17593
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Mediterraneibacter glycyrrhizinilyticus (DSM 17593, JCM 13368, ZM35)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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