Cite this strain

"Citricoccus yambaruensis" (DSM 18783, NBRC 102121, PS9)

BacDive ID 24199

Type strain

Strain Designation PS9

Culture col. no. DSM 18783 NBRC 102121 PS9

NCBI tax ID(s) 1978372 582852

Special Collections DSMZ

Links

"Citricoccus yambaruensis" PS9 is a mesophilic prokaryote that was isolated from soil.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 405869

NBRC 102121,DSM 18783

@ref 20215

Last LPSN update 2025-12-16 09:52:48

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Micrococcaceae

Genus Citricoccus

Species "Citricoccus yambaruensis"

Full scientific name Citricoccus yambaruensis Matsui et al. 2012

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
20502	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)		Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
20502	positive	growth	28	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
20502	soil	Yambaru area of Okinawa Prefecture	Japan	JPN	Asia

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20502	Citricoccus yambaruensis gene for 16S rRNA, partial sequence	AB473562	1476		582852

GC content

20502

GC-content (mol%)72.4

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Citricoccus yambaruensis sp. nov., a racemic phenylsuccinate stereospecifically assimilating actinomycete isolated from soil in Okinawa.	Matsui T, Semba H, Hanada S	J Gen Appl Microbiol	10.2323/jgam.58.373	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20502	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18783
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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"Citricoccus yambaruensis" (DSM 18783, NBRC 102121, PS9)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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