Name: Citricoccus yambaruensis PS9
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 24199

Type strain:

Species: Citricoccus yambaruensis

Strain Designation: PS9

Culture col. no.: DSM 18783, NBRC 102121

Strain history: <- T. Matsui; PS9

NCBI tax ID(s): 1978372 (species)

SI-ID 405869

DSM 18783

Section

Citricoccus yambaruensis PS9 is a mesophilic bacterium that was isolated from soil.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Citricoccus*
	Species	"Citricoccus yambaruensis"
	Full Scientific Name (LPSN)	Citricoccus yambaruensis Matsui et al. 2012

Information on culture and growth conditions Culture and growth conditions

[Ref.: #20502]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #20502]

Culture medium growth

[Ref.: #20502]

Culture medium link

Medium recipe at MediaDive

[Ref.: #20502]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #20502]			growth	28 °C

[Ref.: #20502]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #20502]	Sample type/isolated from	soil
[Ref.: #20502]	Geographic location (country and/or sea, region)	Yambaru area of Okinawa Prefecture
[Ref.: #20502]	Country	Japan
[Ref.: #20502]	Country ISO 3 Code	JPN
[Ref.: #20502]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20502]	Citricoccus yambaruensis gene for 16S rRNA, partial sequence	AB473562	1476	ENA	582852 tax ID

[Ref.: #20502]

GC-content

72.4 mol%

Availability in culture collections External links

[Ref.: #20502]

Culture collection no.

DSM 18783, NBRC 102121

[Ref.: #88147]

SI-ID 405869

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Citricoccus yambaruensis sp. nov., a racemic phenylsuccinate stereospecifically assimilating actinomycete isolated from soil in Okinawa.	Matsui T, Semba H, Hanada S	J Gen Appl Microbiol	10.2323/jgam.58.373	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20502

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 18783

#88147

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405869.1 )

* These data were automatically processed and therefore are not curated

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